| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835664
GI number: 15835664
Start: 161988
End: 162767
Strand: Direct
Name: Not Available
Synonym: CPj0128
Alternate gene names: NA
Gene position: 161988-162767 (Clockwise)
Preceding gene: 15835662
Following gene: 15835666
Centisome position: 13.21
GC content: 45.51
Gene sequence:
>780_bases ATGTTAAGGAATCAGGTACTTGTTTACTGTAGTGAGGGTGTTTCTCCTTATTATTTACGGCATACGATACGTTTTCTCAA GTACTATAGCACTCAAGAAGGTGCTTTCGATATTCTTAGGGTCGACGGGAATTTTTTGATTAAGAATCCTTTTTGGGAAG AAACGACGCGCTTATTGGTATTCCCAGGGGGTGCGGACCGCCCCTATCATCGTGTACTTCATGGTTTAGGCACTGCCCGT ATTTTCCAATATGTTTCTGAGGGAGGGAATTTTCTAGGGATTTGTGCTGGGGCATATTTTGGTTCTAAGATGATTTATTT TTATGAGCCTGAGGGAGCGCCGTTGCAAGGGGCTCGAGATCTAGGGTTTTTCCCGGGGACTGCCAAAGGTCCTGCTTATA GGGGGAATTTTTCTTATGTGAGTCCTTCTGGTGTAAGGGTTTCACCTCAGTTATTTTCAGATTTTGGCTTGGGGTATGCG ATGTTTAATGGGGGGTGTTTTTTCGAGGGCTCGGAAGGATATCCTGGGGTGAATATCGAATCTCGGTATGACGATCTTCC AGGGAAGCCTGCGAGCATAGTGTCTAGGATTGTCAGTAAGGGCTTAGCGGTTCTTTCAGGACCTCATATAGAGTATCTTC CTCATTACTGTCGTATGGTTAAGGAGAACGTCCAGAAAACACGTGAATTCCTCCAAAGGGAGCGTACAACTTTGGACCGC TATTGTCAGAATCTTGTACAGCGTTTGCGTCAGCCTGCATTTTCGAAAGCGGACTGCTGA
Upstream 100 bases:
>100_bases CCTACAATTTTAACATGGTAGGGATTTTTGTTGGTATTGAGACTTTAAATAATACGAATTGCTTTTCTGTTCGAGAGGAA AATAAGAAGATAGGGGAAGA
Downstream 100 bases:
>100_bases AGATCTAAATTAGGCAATCGAAATCATCAGCGTGTATTTTTGTCGTATCGAACTCGGTGATAAGCTGATATAGGATTGGG CTGCAAAGAACTATGGAGTG
Product: biotin protein ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLVFPGGADRPYHRVLHGLGTAR IFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARDLGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYA MFNGGCFFEGSEGYPGVNIESRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR YCQNLVQRLRQPAFSKADC
Sequences:
>Translated_259_residues MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLVFPGGADRPYHRVLHGLGTAR IFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARDLGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYA MFNGGCFFEGSEGYPGVNIESRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR YCQNLVQRLRQPAFSKADC >Mature_259_residues MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLVFPGGADRPYHRVLHGLGTAR IFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARDLGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYA MFNGGCFFEGSEGYPGVNIESRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR YCQNLVQRLRQPAFSKADC
Specific function: Unknown
COG id: COG4285
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0128/CT_035/TC_0305 family
Homologues:
Organism=Saccharomyces cerevisiae, GI6320060, Length=281, Percent_Identity=32.3843416370107, Blast_Score=119, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y128_CHLPN (Q9Z953)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: A72116 - PIR: A86507 - RefSeq: NP_224336.1 - RefSeq: NP_300188.1 - RefSeq: NP_445185.1 - RefSeq: NP_876406.1 - ProteinModelPortal: Q9Z953 - GeneID: 1466813 - GeneID: 894640 - GeneID: 918916 - GeneID: 963252 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0643 - KEGG: cpj:CPj0128 - KEGG: cpn:CPn0128 - KEGG: cpt:CpB0130 - TIGR: CP_0643 - HOGENOM: HBG402714 - OMA: ENTKDTE - ProtClustDB: CLSK871147 - BioCyc: CPNE115711:CP_0643-MONOMER - BioCyc: CPNE115713:CPN0128-MONOMER - BioCyc: CPNE138677:CPJ0128-MONOMER - BioCyc: CPNE182082:CPB0130-MONOMER - InterPro: IPR019197 - InterPro: IPR015834 - PIRSF: PIRSF016642
Pfam domain/function: PF09825 BPL_N
EC number: NA
Molecular weight: Translated: 29210; Mature: 29210
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLV CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCEEEE FPGGADRPYHRVLHGLGTARIFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARD ECCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHCCEEEEEECCCCCCCCCCCC LGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYAMFNGGCFFEGSEGYPGVNIE CCCCCCCCCCCCCCCCCCEECCCCCEECHHHHHHHCCCEEEECCEEEEECCCCCCCCCCC SRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR CCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YCQNLVQRLRQPAFSKADC HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLV CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCEEEE FPGGADRPYHRVLHGLGTARIFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARD ECCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHCCEEEEEECCCCCCCCCCCC LGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYAMFNGGCFFEGSEGYPGVNIE CCCCCCCCCCCCCCCCCCEECCCCCEECHHHHHHHCCCEEEECCEEEEECCCCCCCCCCC SRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR CCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YCQNLVQRLRQPAFSKADC HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362