Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835664

GI number: 15835664

Start: 161988

End: 162767

Strand: Direct

Name: Not Available

Synonym: CPj0128

Alternate gene names: NA

Gene position: 161988-162767 (Clockwise)

Preceding gene: 15835662

Following gene: 15835666

Centisome position: 13.21

GC content: 45.51

Gene sequence:

>780_bases
ATGTTAAGGAATCAGGTACTTGTTTACTGTAGTGAGGGTGTTTCTCCTTATTATTTACGGCATACGATACGTTTTCTCAA
GTACTATAGCACTCAAGAAGGTGCTTTCGATATTCTTAGGGTCGACGGGAATTTTTTGATTAAGAATCCTTTTTGGGAAG
AAACGACGCGCTTATTGGTATTCCCAGGGGGTGCGGACCGCCCCTATCATCGTGTACTTCATGGTTTAGGCACTGCCCGT
ATTTTCCAATATGTTTCTGAGGGAGGGAATTTTCTAGGGATTTGTGCTGGGGCATATTTTGGTTCTAAGATGATTTATTT
TTATGAGCCTGAGGGAGCGCCGTTGCAAGGGGCTCGAGATCTAGGGTTTTTCCCGGGGACTGCCAAAGGTCCTGCTTATA
GGGGGAATTTTTCTTATGTGAGTCCTTCTGGTGTAAGGGTTTCACCTCAGTTATTTTCAGATTTTGGCTTGGGGTATGCG
ATGTTTAATGGGGGGTGTTTTTTCGAGGGCTCGGAAGGATATCCTGGGGTGAATATCGAATCTCGGTATGACGATCTTCC
AGGGAAGCCTGCGAGCATAGTGTCTAGGATTGTCAGTAAGGGCTTAGCGGTTCTTTCAGGACCTCATATAGAGTATCTTC
CTCATTACTGTCGTATGGTTAAGGAGAACGTCCAGAAAACACGTGAATTCCTCCAAAGGGAGCGTACAACTTTGGACCGC
TATTGTCAGAATCTTGTACAGCGTTTGCGTCAGCCTGCATTTTCGAAAGCGGACTGCTGA

Upstream 100 bases:

>100_bases
CCTACAATTTTAACATGGTAGGGATTTTTGTTGGTATTGAGACTTTAAATAATACGAATTGCTTTTCTGTTCGAGAGGAA
AATAAGAAGATAGGGGAAGA

Downstream 100 bases:

>100_bases
AGATCTAAATTAGGCAATCGAAATCATCAGCGTGTATTTTTGTCGTATCGAACTCGGTGATAAGCTGATATAGGATTGGG
CTGCAAAGAACTATGGAGTG

Product: biotin protein ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLVFPGGADRPYHRVLHGLGTAR
IFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARDLGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYA
MFNGGCFFEGSEGYPGVNIESRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR
YCQNLVQRLRQPAFSKADC

Sequences:

>Translated_259_residues
MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLVFPGGADRPYHRVLHGLGTAR
IFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARDLGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYA
MFNGGCFFEGSEGYPGVNIESRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR
YCQNLVQRLRQPAFSKADC
>Mature_259_residues
MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLVFPGGADRPYHRVLHGLGTAR
IFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARDLGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYA
MFNGGCFFEGSEGYPGVNIESRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR
YCQNLVQRLRQPAFSKADC

Specific function: Unknown

COG id: COG4285

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_0128/CT_035/TC_0305 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6320060, Length=281, Percent_Identity=32.3843416370107, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y128_CHLPN (Q9Z953)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A72116
- PIR:   A86507
- RefSeq:   NP_224336.1
- RefSeq:   NP_300188.1
- RefSeq:   NP_445185.1
- RefSeq:   NP_876406.1
- ProteinModelPortal:   Q9Z953
- GeneID:   1466813
- GeneID:   894640
- GeneID:   918916
- GeneID:   963252
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0643
- KEGG:   cpj:CPj0128
- KEGG:   cpn:CPn0128
- KEGG:   cpt:CpB0130
- TIGR:   CP_0643
- HOGENOM:   HBG402714
- OMA:   ENTKDTE
- ProtClustDB:   CLSK871147
- BioCyc:   CPNE115711:CP_0643-MONOMER
- BioCyc:   CPNE115713:CPN0128-MONOMER
- BioCyc:   CPNE138677:CPJ0128-MONOMER
- BioCyc:   CPNE182082:CPB0130-MONOMER
- InterPro:   IPR019197
- InterPro:   IPR015834
- PIRSF:   PIRSF016642

Pfam domain/function: PF09825 BPL_N

EC number: NA

Molecular weight: Translated: 29210; Mature: 29210

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLV
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCEEEE
FPGGADRPYHRVLHGLGTARIFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARD
ECCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHCCEEEEEECCCCCCCCCCCC
LGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYAMFNGGCFFEGSEGYPGVNIE
CCCCCCCCCCCCCCCCCCEECCCCCEECHHHHHHHCCCEEEECCEEEEECCCCCCCCCCC
SRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR
CCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YCQNLVQRLRQPAFSKADC
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLRNQVLVYCSEGVSPYYLRHTIRFLKYYSTQEGAFDILRVDGNFLIKNPFWEETTRLLV
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCEEEE
FPGGADRPYHRVLHGLGTARIFQYVSEGGNFLGICAGAYFGSKMIYFYEPEGAPLQGARD
ECCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHCCEEEEEECCCCCCCCCCCC
LGFFPGTAKGPAYRGNFSYVSPSGVRVSPQLFSDFGLGYAMFNGGCFFEGSEGYPGVNIE
CCCCCCCCCCCCCCCCCCEECCCCCEECHHHHHHHCCCEEEECCEEEEECCCCCCCCCCC
SRYDDLPGKPASIVSRIVSKGLAVLSGPHIEYLPHYCRMVKENVQKTREFLQRERTTLDR
CCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YCQNLVQRLRQPAFSKADC
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362