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The map label for this gene is ytfF

Identifier: 15835663

GI number: 15835663

Start: 160838

End: 161854

Strand: Reverse

Name: ytfF

Synonym: CPj0127

Alternate gene names: 15835663

Gene position: 161854-160838 (Counterclockwise)

Preceding gene: 15835665

Following gene: 15835659

Centisome position: 13.2

GC content: 44.15

Gene sequence:

>1017_bases
ATGTTCCCCAGCGCAAATCAAGAATCCAGAACCCGTAATGTACCCCTAGGCATCTTCCATGGGCTCGTTGCCTGCCTATA
CTGGGGAATCGTCTTTGTCATACCAAACTTCCTCGGTTCGTTTGGCGATCTTGATATTGTACTTACCCGTTATACCATTT
TTGGTATTTTCTCCCTGATTGCTTGCGCTATAAAAAATCCCTCCGTAATTAAAAAAACTCCTTTATATATTTGGAGAAAA
AGCCTCCTCTGGACACTGCTGATTAACCCCGTGTATTACTTCGGAATCACCCTTGGCATCCGCTATGTTGGATCCGCAAT
CACTGTAGTCATCGCCAGCCTGGCTCCAACCGCCGTACTCTACCACTCCAATACAAAGCAAAAAGAACTCCCCTATTCTC
TACTCTTTGCTATCAGCAGTGTGATCATCACAGGAGTGATTCTGACACACCTCTCCGCACTCAACTTGCCAACAGCCGCC
TCTCCTCTCTACTCTATCTTGGGAGTCATTGCAGTCATACTCTCAACAAGTCTTTGGGTAATCTATGTGATCCGCAATCA
ATCGCTACTCGAAAAACACCCCAACCTAACTCCAGATACCTGGAGCTACCTCATCGGAATCAGCGCTTTGATCATCTGCC
TCCCTATGATTATTATTCTCGATCTCTGTGGAATTACCCACGTAACACACAATCTTATCTCGCATACACCGGGATCCGAG
CGACTGCTCTTCTTGTTGCTATGTAGTGCTATGGGAATATTTTCCTCAGCAAAAGCTTTAATAGCCTGGAATAAAGCTAG
TTTGAATCTCTCACCAGCATTGCTAGGGGCGATATTAATCTTTGAACCAATTTTTGGCCTTGTGCTTACCTATCTCTACT
CACAAAGTCTTCCTTCTCTACAAGAAGGTATAGGAATCTTTCTAATGTTAGGAGGAAGCCTCCTCTGCCTAGTTCTCTTC
GGAAGAAAAGTACAGAAAAGTTTGGAAAACTCTCAAGTATCGTCTTCTAACGAATAA

Upstream 100 bases:

>100_bases
GAAAAGCAATTCGTATTATTTAAAGTCTCAATACCAACAAAAATCCCTACCATGTTAAAATTGTAGGCAATTCTATTGCT
CATACCCTTAAGAGAGCTTT

Downstream 100 bases:

>100_bases
TCCATCAAAAACACTGCGCAAAGAACTCAACTTTTTTACTATCTCCTAGACAGCCTTGACTCTAATTCAGAAAGACGATC
TTGAGCCACTTTTAATTTCT

Product: cationic amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MFPSANQESRTRNVPLGIFHGLVACLYWGIVFVIPNFLGSFGDLDIVLTRYTIFGIFSLIACAIKNPSVIKKTPLYIWRK
SLLWTLLINPVYYFGITLGIRYVGSAITVVIASLAPTAVLYHSNTKQKELPYSLLFAISSVIITGVILTHLSALNLPTAA
SPLYSILGVIAVILSTSLWVIYVIRNQSLLEKHPNLTPDTWSYLIGISALIICLPMIIILDLCGITHVTHNLISHTPGSE
RLLFLLLCSAMGIFSSAKALIAWNKASLNLSPALLGAILIFEPIFGLVLTYLYSQSLPSLQEGIGIFLMLGGSLLCLVLF
GRKVQKSLENSQVSSSNE

Sequences:

>Translated_338_residues
MFPSANQESRTRNVPLGIFHGLVACLYWGIVFVIPNFLGSFGDLDIVLTRYTIFGIFSLIACAIKNPSVIKKTPLYIWRK
SLLWTLLINPVYYFGITLGIRYVGSAITVVIASLAPTAVLYHSNTKQKELPYSLLFAISSVIITGVILTHLSALNLPTAA
SPLYSILGVIAVILSTSLWVIYVIRNQSLLEKHPNLTPDTWSYLIGISALIICLPMIIILDLCGITHVTHNLISHTPGSE
RLLFLLLCSAMGIFSSAKALIAWNKASLNLSPALLGAILIFEPIFGLVLTYLYSQSLPSLQEGIGIFLMLGGSLLCLVLF
GRKVQKSLENSQVSSSNE
>Mature_338_residues
MFPSANQESRTRNVPLGIFHGLVACLYWGIVFVIPNFLGSFGDLDIVLTRYTIFGIFSLIACAIKNPSVIKKTPLYIWRK
SLLWTLLINPVYYFGITLGIRYVGSAITVVIASLAPTAVLYHSNTKQKELPYSLLFAISSVIITGVILTHLSALNLPTAA
SPLYSILGVIAVILSTSLWVIYVIRNQSLLEKHPNLTPDTWSYLIGISALIICLPMIIILDLCGITHVTHNLISHTPGSE
RLLFLLLCSAMGIFSSAKALIAWNKASLNLSPALLGAILIFEPIFGLVLTYLYSQSLPSLQEGIGIFLMLGGSLLCLVLF
GRKVQKSLENSQVSSSNE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=332, Percent_Identity=25.6024096385542, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 36941; Mature: 36941

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPSANQESRTRNVPLGIFHGLVACLYWGIVFVIPNFLGSFGDLDIVLTRYTIFGIFSLI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ACAIKNPSVIKKTPLYIWRKSLLWTLLINPVYYFGITLGIRYVGSAITVVIASLAPTAVL
HHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE
YHSNTKQKELPYSLLFAISSVIITGVILTHLSALNLPTAASPLYSILGVIAVILSTSLWV
EECCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE
IYVIRNQSLLEKHPNLTPDTWSYLIGISALIICLPMIIILDLCGITHVTHNLISHTPGSE
EEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLLFLLLCSAMGIFSSAKALIAWNKASLNLSPALLGAILIFEPIFGLVLTYLYSQSLPSL
HHHHHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QEGIGIFLMLGGSLLCLVLFGRKVQKSLENSQVSSSNE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFPSANQESRTRNVPLGIFHGLVACLYWGIVFVIPNFLGSFGDLDIVLTRYTIFGIFSLI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ACAIKNPSVIKKTPLYIWRKSLLWTLLINPVYYFGITLGIRYVGSAITVVIASLAPTAVL
HHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE
YHSNTKQKELPYSLLFAISSVIITGVILTHLSALNLPTAASPLYSILGVIAVILSTSLWV
EECCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE
IYVIRNQSLLEKHPNLTPDTWSYLIGISALIICLPMIIILDLCGITHVTHNLISHTPGSE
EEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLLFLLLCSAMGIFSSAKALIAWNKASLNLSPALLGAILIFEPIFGLVLTYLYSQSLPSL
HHHHHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QEGIGIFLMLGGSLLCLVLFGRKVQKSLENSQVSSSNE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]