| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is uvrA
Identifier: 15835631
GI number: 15835631
Start: 118505
End: 123985
Strand: Reverse
Name: uvrA
Synonym: CPj0096
Alternate gene names: 15835631
Gene position: 123985-118505 (Counterclockwise)
Preceding gene: 15835633
Following gene: 15835620
Centisome position: 10.11
GC content: 42.24
Gene sequence:
>5481_bases ATGAAATCACTTCCTGTATATGTTTCTGGGATCAAAGTTAGAAATCTAAAAAACGTTTCTATCCATTTTAACTCCGAGGA AATCGTTCTACTCACAGGAGTTTCGGGATCAGGAAAATCCTCGATAGCCTTTGATACCCTATATGCTGCTGGAAGAAAAC GCTATATTTCAACACTTCCGACATTCTTCGCTACTACGATAACGACGCTGCCCAATCCTAAAGTAGAAGAAATTCATGGT CTCTCACCAACAATAGCAATAAAACAGAACCACTTTTCACACTATAGTCATGCGACTGTCGGGAGCACTACTGAACTTTT TTCGCACCTTGCTCTTCTCTTCACGCTAGAAGGACAGGCTCGAGATCCTAAGACTAAAGAAGTCTTAGATCTCTACAGCA AGGAGAAAGTTCTTAGTACCATTATGGAGCTCTCTGAAGGTGTACAGATCTCTATTTTAGCTCCTCTGCTACGTAAAGAT ATTGCTGCAATCCATGAGTATGCACAACAGGGATTTACAAAAGTACGTTGTAACGGCACGATCCACCCCATTTACTCCTT CCTAACTTCAGGGATTCCTGAAGACTGCTCTGTTGATATTGTTATTGATACTCTAATCAAAAGTGAAAATAATATTGCAA GGCTCAAAGTTAGCCTATTCACAGCTTTGGAATTCGGAGAGGGTCATTGCTCAGTTCTTAGTGACGAAGAGCTCATGACA TTCTCCACAAAGCAACAGATCGATGACGTCACCTATACCCCTCTAACTCAACAATTATTTTCTCCTCATGCCCTGGAGAG CCGTTGCTCTCTTTGTCAAGGATCCGGGATCTTTATTTCCATAGATAATCCCCTTCTTATCGATGAAAATCTTTCGATTA AAGAGAATTGCTGTAGCTTTGCTGGAAATTGTTCTTCCTATCTCTATCATACTATATACCAAGCTCTTGCTGATGCCTTA AATTTCAATCTAGAAACTCCATGGAAAGATCTTTCCCCAGAAATCCAAAATATTTTTCTTAGGGGAAAAAATAACTTGGT TCTTCCTGTACGACTCTTCGATCAAACTTTAGGAAAAAAGAATCTCACCTATAAAGTATGGAGAGGTGTACTTAACGATA TAGGAGATAAAGTTCGTTATACCACGAAGCCCTCACGTTATCTCTCCAAAGGCATGTCAGCACATTCCTGTTCCCTATGT AAAGGTACAGGCCTAGGAGACTACGCTTCCGTAGCTACTTGGGAAGGAAAAACATTCACTGAATTCCAACAGATGTCTCT AAATAACTGGCACGTATTTTTTTCTAAGGTAAAATCTCCTTCTCTCTCTATTCAAGAAATCCTGCAGGGACTAAAGCAAA GGCTCTCTTTTCTTATTGACTTAGGGCTAGGCTACCTCACTCCAAATCGCGCATTAGCTACCCTTTCTGGAGGAGAACAA GAACGTACAGCAATAGCAAAACACCTAGGAGGAGAACTTTTTGGAATTACCTATATCCTAGATGAGCCCTCCATAGGCTT GCATCCACAAGACACTGAAAAGCTCATCGGTGTCATTAAAAAGCTACGAGATCAAGGCAATACGGTGATTCTTGTTGAGC ATGAAGAACGGATGATTTCTCTTGCGGATAGGATTATTGACATCGGCCCTGGAGCAGGAATTTTCGGAGGCGAGGGCCTC TTTAATGGAAAGCCTGAGGACTTCCTCATGAACTCCTCATCTCTGACAGCAAAATACTTGCGTCAAGAGCTTACCATTCC CATTCCAGAATCCCGGGAAGCTCCCACATCTTGGCTCTTGCTAACAGAAGCAACGATCCACAACCTTAAAAATCTTTCTA TTCGTCTGCCGTTAGCTCGGCTAATCGGAGTTACAGGAGTCTCTGGATCGGGGAAATCCTCTTTAATTAATAATACGTTA GTGCCTGCTATAGAAAGCTTCTTGAAACAAGAGAACCCTAAAAATCTGCATTTTGAGTGGGGATGCATAGGCCGCTTGAT TCACATTACCCGAGATCTTCCAGGACGCTCACAGCGTTCGATACCTTTGACCTATATTAAAGCCTTTGATGATATCCGGG AACTCTTCGCCTCTCAACCTCGCAGCCTACGTCAAGGACTGACAAAAGCTCATTTTAGCTTCAACCAACCTCAAGGAGCT TGTATTCAGTGTCAGGGGTTAGGAACGATGACCATCTCCGATGATGATACACCCATCCCCTGTTCTGAATGCCAAGGGAA GCGTTATCACTCAGAAGTATTGGAAATCCTCTATGAAGGGAAGAACATCGCTGATATTTTAGATATGACAGCGTACGAAG CAGAAAAATTTTTCATTTCACATCCTAAAATTCATGAAAAAATCCATGCTCTATGTTCCCTACGCCTAGATTACCTGCCC TTAGGAAGACCTCTTTCCACATTATCCGGAGGGGAAATTCAAAGGCTAAAACTCGCTCACGAGCTTCTCTTTGCTTCTCC TAAGCAAACACTCTATGTCCTAGATGAACCTACGACAGGCCTTCATACTCATGATATCCAAGCACTGATCGAGGTCCTTC TATCCCTCACATATCTAGGGCACACAGTCCTTGTTATCGAACATAACATGCACGTTGTCAAAGTTTGTGATTATGTTTTG GAATTAGGTCCTGAAGGAGGAGATCTCGGAGGATACCTCCTGGCATCCTGCACCCCTAAGGATCTTATCCAACTAAATAC TCCAACAGCAAAAGCGTTGGCCCCCTATATTGAAGGTTCTCTAGACATACCGGTAGTAAAATCTGAACCGCCATCCTCTC CTAAATCTTGTGATATCCTTATCAAGGATGCCTATCAAAATAATCTCAAACACATAGATCTTGCTCTTCCGAGAAACTCC CTAATAGCAATTGCGGGTCCTGGAGCCTCAGGGAAACATTCTTTAGTCTTTGATATACTCTATGCATCAGGAAATATCGC TTATGCCGAGCTCTTCCCTCCCTACATTAGACAGGGTCTGCTTAAGGAGACTCCTCTACCCTCTGTAGGAGAGGTAAAAG GACTCTCTCCAGTCATTTCGGTAAGAAAATGTAGCTCCTCCAATCGCTCGTACCATACAATAGCCTCGGCTCTCGGATTA AGCAATGGTCTGGAAGAGCTCTTTGCCATCTTAGGAGAACCTTTTTCTCCCCTTACAGAAGAAAAACTCTCTAAAATACA CCTCAGACCATCATCGATAGCTACTCAAAGCTATAACGACGAATTAACTTCACTATTAACCTCTCCGATTCCTCTTGGTG CTGATCTGGAAATCTTCCTTCAAGAAAAACAAAAAGAGGGATTCATAAAGTTATATTCTGAGGGGAACCTCTATGATTTA GATGAGAGGCTGCCTCTAAATCTCATAGAACCTGCTATAGTCATACAACATACAAAAGTATCCCCGAAAAATAGTTCCTC TTTATTATCCGCAATCTCGGTAGCTTTTTCTCTATCCTCAGAAATCTGGATCTATATCTCTCAGAAAAAGCAACGAAAAC TCTCGTATTCCTTAGGGTGGAAAGATAAGAAAGGGAGACTCTATCCCGAGATTACACATCAACTACTTTCTTCTGACCAT CCCGAGGGTCGTTGCCTTACATGTGGAGGTCGTGGCGAAATCCTAAAAATCTCCCTAGAAGAGCATAAAGAAAAAATTGC TCACTACACTCCTTTAGAGTTTTTTAGTTTATTCTTTCCAAAGAGCTATATGAAGCCTGTACAAAAGCTGCTTAAAGATG AGAATGCCTCTCAACCACTAAAGTTGCTAACTACGAAAGAGTTCCTAAATTTTTGCCGAGGTTCCTCAGAGTTTCCAGGA ATGAACGCACTACTTATGGAGCAGCTAGATACTGAATCTGACTCTCCCCTGATAAAACCTCTGCTTGCTCTTACCTCCTG TCCTGCCTGCAAAGGCTCAGGACTAAACGATTATGCCAACTATGTGCGAATCAACAATACCTCGCTTTTGGATATTTATC AGGAAGATGCCACATTCTTAGAATCTTTCCTAAACACTATAGGAACCGATGATACAAGAAGCATAATCCAAGATTTGATG AATCGCCTTACCTTCATTAGTAAAGTAGGCCTGAGCTATATTACCCTTGGGCAAAGGCAAGACACTCTCAGTGATGGTGA GAACTACCGTTTACACCTTGCCAAAAAGATCTCTATAAATCTTACCAACATCGTCTACTTATTCGAAGAGCCTCTTTCTG GACTGCACCCCCAGGATCTTCCTACCATAGTTCAGCTACTTAAAGAGCTCGTAGCAAATAACAACACAGTAATTGCTACC GATCGGTCCTGTTCTTTAATCCCCCATGCCGATCACGCGATCTTCTTGGGTCCAGGATCTGGACCTCAAGGAGGATTTCT CATGGATTCTGATACTGAGGTTTGCCCATCTGTAGACCTACACGCTAACGTTCCCCAAACTGAGGTTTGTCCCAAGGCTC CACTTTCTATAAGTAAGGCAAACCATACCCGAGGATCCGATCGTACATTAAAGGTAAATCTATCGATACACCATATTCAG AATTTGAAAGTATCGGCTCCTCTCCATGCTTTGGTTGCCATTGGAGGAGTTTCAGGATCTGGGAAAACCTCTCTACTTTT AGAAGGATTTAAAAAACAAGCTGAGCTCCTGATAGCAAAAGGAACTACAACATTTTCCGACCTTGTAGTGATCGACTCTC ATCCAATAGCTTCATCGCAACGCTCTGATATCAGCACCTATTTCGATATTGCTCCTTCCTTGAGAGCTTTTTATGCTTCG CTAACACAAGCCAAAGCCCTGAATATTTCATCTACGATGTTCAGTACAAATACAAAACAAGGACAATGCTCGGATTGCCA AGGACTTGGGTACCAATGGATAGATCGGGCTTTTTACGCTTTAGAAAAGCGTCCCTGCCCTACCTGCTCAGGATTTCGTA TCCAACCTCTTGCTCAGGAAGTCCTTTATGAAGGCAAGCATTTCGGAGAACTTTTGCATACTCCGATTGAAACTGTAGCC CTCCGATTTCCCTTTATTAAAAAGATACAAAAACCTCTAAAAGCACTTCTTGACATAGGACTCGGCTATCTTCCTATCGG CCAAAAACTCTCTTCCTTATCTGTAAGTGAAAAAACAGCACTGAAAACTGCTTATTTTCTCTATCAAACTCCAGAGACTC CCACCCTATTTCTCATTGATGAGCTCTTTTCTTCTCTAGATCCAATCAAAAAACAACATCTTCCAGAAAAACTTCGCTCC CTCATAAATAGCGGCCACTCGGTAATCTACATAGATCACGATGTGAAGTTGTTAAAATCTGCGGACTACCTCATAGAGAT AGGCCCGGGATCTGGGAAACAAGGAGGAAAGCTTCTTTTTTCAGGATCTCCCAAAGATATCTATGCAAGTAAGGACTCGT TGCTGAAAAAGTATATCTGCAATGAAGAACTCGATTCTTAA
Upstream 100 bases:
>100_bases GGTTTAATTTGTACTTGAAATCCCAAGATATCAGTGCGGATATGACTCTTTTCTCAAGGTTAGGTAAGAGACCTTTCTAA GTATATTACGAGAATTCTTT
Downstream 100 bases:
>100_bases GAACTTAGAATCTAAGATCCTGAGACCATACACAAATCATTTAAAGCTGAAATTCTTCGGTTAAGAGGTGATACATAGTC TGGCATAAGTCACGCTCGTC
Product: excinuclease ABC subunit A
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]
Number of amino acids: Translated: 1826; Mature: 1826
Protein sequence:
>1826_residues MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFATTITTLPNPKVEEIHG LSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD IAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSFAGNCSSYLYHTIYQALADAL NFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGPGAGIFGGEGL FNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTL VPAIESFLKQENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVL ELGPEGGDLGGYLLASCTPKDLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGL SNGLEELFAILGEPFSPLTEEKLSKIHLRPSSIATQSYNDELTSLLTSPIPLGADLEIFLQEKQKEGFIKLYSEGNLYDL DERLPLNLIEPAIVIQHTKVSPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPLKLLTTKEFLNFCRGSSEFPG MNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLM NRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKANHTRGSDRTLKVNLSIHHIQ NLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRS LINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKYICNEELDS
Sequences:
>Translated_1826_residues MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFATTITTLPNPKVEEIHG LSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD IAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSFAGNCSSYLYHTIYQALADAL NFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGPGAGIFGGEGL FNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTL VPAIESFLKQENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVL ELGPEGGDLGGYLLASCTPKDLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGL SNGLEELFAILGEPFSPLTEEKLSKIHLRPSSIATQSYNDELTSLLTSPIPLGADLEIFLQEKQKEGFIKLYSEGNLYDL DERLPLNLIEPAIVIQHTKVSPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPLKLLTTKEFLNFCRGSSEFPG MNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLM NRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKANHTRGSDRTLKVNLSIHHIQ NLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRS LINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKYICNEELDS >Mature_1826_residues MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFATTITTLPNPKVEEIHG LSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD IAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSFAGNCSSYLYHTIYQALADAL NFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGPGAGIFGGEGL FNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTL VPAIESFLKQENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVL ELGPEGGDLGGYLLASCTPKDLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGL SNGLEELFAILGEPFSPLTEEKLSKIHLRPSSIATQSYNDELTSLLTSPIPLGADLEIFLQEKQKEGFIKLYSEGNLYDL DERLPLNLIEPAIVIQHTKVSPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPLKLLTTKEFLNFCRGSSEFPG MNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLM NRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKANHTRGSDRTLKVNLSIHHIQ NLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRS LINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKYICNEELDS
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI2367343, Length=949, Percent_Identity=36.1433087460485, Blast_Score=546, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR013815 - InterPro: IPR004602 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 201585; Mature: 201585
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLP CCCCCEEEEEEEEECEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TFFATTITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQA HHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEECCCC RDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKDIAAIHEYAQQGFTKVRCNGT CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCC IHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT HHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCEEEEEEEEEEHHHCCCCCEEEECCCHHEE FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSF ECHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHH AGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEEEHHHHHHHCCCC NLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLCKGTGLGDYASVATWEGKTFT CCHHHHHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH EFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ HHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMIS HHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHH LADRIIDIGPGAGIFGGEGLFNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLL HHHHHEECCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEE LTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESFLKQENPKNLHFEW EEHHHHHHCCCCEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEH GCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFIS EEEECCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEC HPKIHEKIHALCSLRLDYLPLGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTG CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC LHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPK CCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHH DLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS HHEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEHHHCCCCEEEEEECCCC LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVIS EEEEECCCCCCCCEEEEEEEEECCCEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHH VRKCSSSNRSYHTIASALGLSNGLEELFAILGEPFSPLTEEKLSKIHLRPSSIATQSYND HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHEECCCHHHCCCCCHH ELTSLLTSPIPLGADLEIFLQEKQKEGFIKLYSEGNLYDLDERLPLNLIEPAIVIQHTKV HHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHCCCEEEEEECCC SPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCC PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPL CCCCEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH KLLTTKEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYAN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHC YVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLMNRLTFISKVGLSYITLGQRQ EEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC DTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT CCCCCCCCEEEEEEEEEEEEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEE DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKA CCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAK CCCCCCCCEEEEEEEEEEECCCEECCCCEEEHEEECCCCCCCHHHHHHHHHHCEEEEEEC GTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYASLTQAKALNISSTMFSTNTKQ CCCCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEECCCCC GQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHCCHHHHHHHHCCHHHHH LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLID HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECCCCCEEEEHH ELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLF HHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCEEEE SGSPKDIYASKDSLLKKYICNEELDS CCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLP CCCCCEEEEEEEEECEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TFFATTITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQA HHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEECCCC RDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKDIAAIHEYAQQGFTKVRCNGT CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCC IHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT HHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCEEEEEEEEEEHHHCCCCCEEEECCCHHEE FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSF ECHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHH AGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEEEHHHHHHHCCCC NLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLCKGTGLGDYASVATWEGKTFT CCHHHHHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH EFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ HHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMIS HHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHH LADRIIDIGPGAGIFGGEGLFNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLL HHHHHEECCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEE LTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESFLKQENPKNLHFEW EEHHHHHHCCCCEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEH GCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFIS EEEECCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEC HPKIHEKIHALCSLRLDYLPLGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTG CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC LHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPK CCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHH DLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS HHEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEHHHCCCCEEEEEECCCC LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVIS EEEEECCCCCCCCEEEEEEEEECCCEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHH VRKCSSSNRSYHTIASALGLSNGLEELFAILGEPFSPLTEEKLSKIHLRPSSIATQSYND HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHEECCCHHHCCCCCHH ELTSLLTSPIPLGADLEIFLQEKQKEGFIKLYSEGNLYDLDERLPLNLIEPAIVIQHTKV HHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHCCCEEEEEECCC SPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCC PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPL CCCCEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH KLLTTKEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYAN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHC YVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLMNRLTFISKVGLSYITLGQRQ EEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC DTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT CCCCCCCCEEEEEEEEEEEEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEE DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKA CCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAK CCCCCCCCEEEEEEEEEEECCCEECCCCEEEHEEECCCCCCCHHHHHHHHHHCEEEEEEC GTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYASLTQAKALNISSTMFSTNTKQ CCCCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEECCCCC GQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHCCHHHHHHHHCCHHHHH LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLID HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECCCCCEEEEHH ELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLF HHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCEEEE SGSPKDIYASKDSLLKKYICNEELDS CCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]