Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835598

GI number: 15835598

Start: 75984

End: 77369

Strand: Direct

Name: Not Available

Synonym: CPj0062

Alternate gene names: NA

Gene position: 75984-77369 (Clockwise)

Preceding gene: 15835597

Following gene: 15835599

Centisome position: 6.19

GC content: 40.98

Gene sequence:

>1386_bases
ATGATGAGCTCTAAGCGTACCTCGAAAATAGCGGTGCTTTCAATTTTATTAACATTTACTCACTCTATAGGGTTCGCAAA
TGCGAATTCGTCCGTAGGTCTTGGCACGGTCTACATTACATCCGAGGTTGTAAAGAAGCCTCAGAAAGGATCAGAAAGGA
AACAAGCCAAAAAAGAACCTCGTGCTCGTAAAGGATACTTAGTCCCTTCTTCAAGGACTCTTTCAGCTCGAGCCCAAAAG
ATGAAAAACTCCTCTCGTAAAGAGTCTTCAGGTGGTTGTAACGAAATTTCTGCAAATTCTACACCCAGATCTGTAAAATT
ACGAAGAAACAAACGTGCAGAACAAAAGGCAGCTAAACAAGGATTTTCAGCTTTTTCTAACCTAACTTTGAAAAGCCTAC
TTCCTAAACTTCCTTCAAAACAAAAAACTTCAATTCACGAGAGAGAAAAAGCAACCTCAAGATTTGTTAATGAGTCTCAG
CTTAGTTCCGCACGAAAACGCTACTGCACACCATCTTCAGCCGCTCCTTCCCTATTTTTAGAAACAGAAATCGTTCGAGC
TCCTGTAGAAAGAACTAAAGAACTTCAAGATAATGAAATTCATATTCCTGTAGTGCAAGTCCAAACGAACCCCAAAGAAC
AAAATACAAAGACAACTAAACAGTTGGCATCCCAAGCCTCGATTCAACAATCTGAAGGAACCGAGCAATCATTGCGAGAG
CTCGCCCAAGGTGCTAGCCTACCTGTCTTAGTGCGCTCTAATCCTGAAGTGTCTGTACAAAGACAAAAAGAAGAGTTATT
AAAAGAACTCGTAGCTGAACGTAGACAATGTAAAAGAAAGTCTGTAAGACAAGCTCTTGAAGCTCGTTCTTTAACTAAGA
AAGTTGCTAGAGGCGGTTCTGTGACCTCGACTTTACGATACGATCCAGAAAAAGCGGCGGAAATCAAAAGTAGACGCAAT
TGCAAAGTAAGTCCTGAAGCACGTGAACAAAAATATTCATCTTGCAAAAGAGATGCTCGCGCTAATGGGAAACAAGACAA
GACAACTCCTAGTGAAGATGCTTCTCAAGAAGAACAACAAACTGGGGCAGGACTCGTACGCAAGACTCCTAAATCTCAGG
TTGCAAGTAATGCTCAGAACTTCTACCGAAATTCTAAAAATACAAACATAGATAGCTATCTTACAGCTAACCAATACAGC
TGTAGTTCTGAAGAAACAGATTGGCCATGTTCTTCCTGCGTCTCTAAACGCAGAACTCACAACAGTATATCTGTATGTAC
CATGGTAGTTACTGTCATTGCGATGATCGTAGGGGCTTTGATTATAGCTAATGCTACAGAATCTCAAACAACATCAGATC
CAACTCCTCCAACTCCTACTCCATAG

Upstream 100 bases:

>100_bases
TTAATAGCTAGAGTTTAAAAAGATTTTTAAGTCCAAGTTGTGAAAAAAATCCTTTTGTTGCTATGGTGATCCTCATAGGC
TTCCAGGAGATTGTAGTCGC

Downstream 100 bases:

>100_bases
TTGTATAGCCCTTGCTGGACGTGTAGCTCTACCCAAAATCTTAGATAGCCTTCTTATCTATGATTTTAGTGGGTAGAGCT
TTCCCTCCCGACTCGTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MMSSKRTSKIAVLSILLTFTHSIGFANANSSVGLGTVYITSEVVKKPQKGSERKQAKKEPRARKGYLVPSSRTLSARAQK
MKNSSRKESSGGCNEISANSTPRSVKLRRNKRAEQKAAKQGFSAFSNLTLKSLLPKLPSKQKTSIHEREKATSRFVNESQ
LSSARKRYCTPSSAAPSLFLETEIVRAPVERTKELQDNEIHIPVVQVQTNPKEQNTKTTKQLASQASIQQSEGTEQSLRE
LAQGASLPVLVRSNPEVSVQRQKEELLKELVAERRQCKRKSVRQALEARSLTKKVARGGSVTSTLRYDPEKAAEIKSRRN
CKVSPEAREQKYSSCKRDARANGKQDKTTPSEDASQEEQQTGAGLVRKTPKSQVASNAQNFYRNSKNTNIDSYLTANQYS
CSSEETDWPCSSCVSKRRTHNSISVCTMVVTVIAMIVGALIIANATESQTTSDPTPPTPTP

Sequences:

>Translated_461_residues
MMSSKRTSKIAVLSILLTFTHSIGFANANSSVGLGTVYITSEVVKKPQKGSERKQAKKEPRARKGYLVPSSRTLSARAQK
MKNSSRKESSGGCNEISANSTPRSVKLRRNKRAEQKAAKQGFSAFSNLTLKSLLPKLPSKQKTSIHEREKATSRFVNESQ
LSSARKRYCTPSSAAPSLFLETEIVRAPVERTKELQDNEIHIPVVQVQTNPKEQNTKTTKQLASQASIQQSEGTEQSLRE
LAQGASLPVLVRSNPEVSVQRQKEELLKELVAERRQCKRKSVRQALEARSLTKKVARGGSVTSTLRYDPEKAAEIKSRRN
CKVSPEAREQKYSSCKRDARANGKQDKTTPSEDASQEEQQTGAGLVRKTPKSQVASNAQNFYRNSKNTNIDSYLTANQYS
CSSEETDWPCSSCVSKRRTHNSISVCTMVVTVIAMIVGALIIANATESQTTSDPTPPTPTP
>Mature_461_residues
MMSSKRTSKIAVLSILLTFTHSIGFANANSSVGLGTVYITSEVVKKPQKGSERKQAKKEPRARKGYLVPSSRTLSARAQK
MKNSSRKESSGGCNEISANSTPRSVKLRRNKRAEQKAAKQGFSAFSNLTLKSLLPKLPSKQKTSIHEREKATSRFVNESQ
LSSARKRYCTPSSAAPSLFLETEIVRAPVERTKELQDNEIHIPVVQVQTNPKEQNTKTTKQLASQASIQQSEGTEQSLRE
LAQGASLPVLVRSNPEVSVQRQKEELLKELVAERRQCKRKSVRQALEARSLTKKVARGGSVTSTLRYDPEKAAEIKSRRN
CKVSPEAREQKYSSCKRDARANGKQDKTTPSEDASQEEQQTGAGLVRKTPKSQVASNAQNFYRNSKNTNIDSYLTANQYS
CSSEETDWPCSSCVSKRRTHNSISVCTMVVTVIAMIVGALIIANATESQTTSDPTPPTPTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50823; Mature: 50823

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSKRTSKIAVLSILLTFTHSIGFANANSSVGLGTVYITSEVVKKPQKGSERKQAKKEP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHCC
RARKGYLVPSSRTLSARAQKMKNSSRKESSGGCNEISANSTPRSVKLRRNKRAEQKAAKQ
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GFSAFSNLTLKSLLPKLPSKQKTSIHEREKATSRFVNESQLSSARKRYCTPSSAAPSLFL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ETEIVRAPVERTKELQDNEIHIPVVQVQTNPKEQNTKTTKQLASQASIQQSEGTEQSLRE
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
LAQGASLPVLVRSNPEVSVQRQKEELLKELVAERRQCKRKSVRQALEARSLTKKVARGGS
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTSTLRYDPEKAAEIKSRRNCKVSPEAREQKYSSCKRDARANGKQDKTTPSEDASQEEQQ
CCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
TGAGLVRKTPKSQVASNAQNFYRNSKNTNIDSYLTANQYSCSSEETDWPCSSCVSKRRTH
HCCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHCC
NSISVCTMVVTVIAMIVGALIIANATESQTTSDPTPPTPTP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSSKRTSKIAVLSILLTFTHSIGFANANSSVGLGTVYITSEVVKKPQKGSERKQAKKEP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHCC
RARKGYLVPSSRTLSARAQKMKNSSRKESSGGCNEISANSTPRSVKLRRNKRAEQKAAKQ
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GFSAFSNLTLKSLLPKLPSKQKTSIHEREKATSRFVNESQLSSARKRYCTPSSAAPSLFL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ETEIVRAPVERTKELQDNEIHIPVVQVQTNPKEQNTKTTKQLASQASIQQSEGTEQSLRE
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
LAQGASLPVLVRSNPEVSVQRQKEELLKELVAERRQCKRKSVRQALEARSLTKKVARGGS
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTSTLRYDPEKAAEIKSRRNCKVSPEAREQKYSSCKRDARANGKQDKTTPSEDASQEEQQ
CCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
TGAGLVRKTPKSQVASNAQNFYRNSKNTNIDSYLTANQYSCSSEETDWPCSSCVSKRRTH
HCCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHCC
NSISVCTMVVTVIAMIVGALIIANATESQTTSDPTPPTPTP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA