| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835585
GI number: 15835585
Start: 65495
End: 65977
Strand: Reverse
Name: Not Available
Synonym: CPj0049
Alternate gene names: NA
Gene position: 65977-65495 (Counterclockwise)
Preceding gene: 15835586
Following gene: 15835577
Centisome position: 5.38
GC content: 39.75
Gene sequence:
>483_bases ATGCTACATCAACCTTACTATGACAAAATATTGACAGGAAACACGATATATATCCCAGGTCACACTCACAAGGACTCAAA CAAACTATTCCAGAAAAAAAGCCGTGCTATTTGGGTGGATGAAAAACCCTTTAGTTTAGACTGCTTTTCGAACGTGTTTT TGATATTTGTGAGTCTAGTACCAATTGCGGGTTTGGTCCGTGCTTATCAAATAAAAAAATCCCTAGATCGGACTACAGTT CAGATCGGGTACTCGCCTTCGCTTTCTTGCGAACAGAAAGAGTGTGTCGAGGCCTTCGTAAACGGATACGGCCTAATTTG CATTTCCATCCTAGGAGGACTGGGAATTTTAGTCCCTATTCTCATTTTGGTCGTTTTGTCGCTACTGCTTCTTGGCATTC TAATGCTTTTTTCTCTTTCTACATATGAGAGCATAAAAAATTATATTTCAAAGCACATTTGCTGGAAATCAAACGCCACG TAA
Upstream 100 bases:
>100_bases TTTATTCTTAGTGACTTATAAAAAATACCATTGACTGAAAGAGAAAAGAAGGAATATCGTTTACCTGCTAGTTATCTATC AAGAAATTTTTTGGCTTACT
Downstream 100 bases:
>100_bases TCTAGAGAACTAAGTTCCTCCTATAGAGGGTTTGGGGCAGGAATCCATAGAAATTTGATACGATATTTCAGGGTATTTCA TCCGAGAATGTAGAGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLHQPYYDKILTGNTIYIPGHTHKDSNKLFQKKSRAIWVDEKPFSLDCFSNVFLIFVSLVPIAGLVRAYQIKKSLDRTTV QIGYSPSLSCEQKECVEAFVNGYGLICISILGGLGILVPILILVVLSLLLLGILMLFSLSTYESIKNYISKHICWKSNAT
Sequences:
>Translated_160_residues MLHQPYYDKILTGNTIYIPGHTHKDSNKLFQKKSRAIWVDEKPFSLDCFSNVFLIFVSLVPIAGLVRAYQIKKSLDRTTV QIGYSPSLSCEQKECVEAFVNGYGLICISILGGLGILVPILILVVLSLLLLGILMLFSLSTYESIKNYISKHICWKSNAT >Mature_160_residues MLHQPYYDKILTGNTIYIPGHTHKDSNKLFQKKSRAIWVDEKPFSLDCFSNVFLIFVSLVPIAGLVRAYQIKKSLDRTTV QIGYSPSLSCEQKECVEAFVNGYGLICISILGGLGILVPILILVVLSLLLLGILMLFSLSTYESIKNYISKHICWKSNAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17946; Mature: 17946
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHQPYYDKILTGNTIYIPGHTHKDSNKLFQKKSRAIWVDEKPFSLDCFSNVFLIFVSLV CCCCCCHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHH PIAGLVRAYQIKKSLDRTTVQIGYSPSLSCEQKECVEAFVNGYGLICISILGGLGILVPI HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LILVVLSLLLLGILMLFSLSTYESIKNYISKHICWKSNAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLHQPYYDKILTGNTIYIPGHTHKDSNKLFQKKSRAIWVDEKPFSLDCFSNVFLIFVSLV CCCCCCHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHH PIAGLVRAYQIKKSLDRTTVQIGYSPSLSCEQKECVEAFVNGYGLICISILGGLGILVPI HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LILVVLSLLLLGILMLFSLSTYESIKNYISKHICWKSNAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA