| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835582
GI number: 15835582
Start: 60740
End: 62947
Strand: Direct
Name: Not Available
Synonym: CPj0045
Alternate gene names: NA
Gene position: 60740-62947 (Clockwise)
Preceding gene: 15835581
Following gene: 15835583
Centisome position: 4.95
GC content: 42.48
Gene sequence:
>2208_bases GTGCTTTTACTGATTTCAGGAGCTCTCTTTCTAACGTTGGGAGTTCCAGGACTTGCTGCAGGGCTCTCTTTTGGATTAGG CATCGGTCTCTCCGCATTAGGAGGCGTACTGGTTGTTTCAGGACTTCTATTCTTTCTCATAAGACGAGGGGTTTCGAAAG TTCGTCCAGAAGAGATTCCTGTGACTCCTTCCCATGAAGCCCAGAAGATTTTATGTCAGCTACCTCAGGAACTGGATCAG TTAGATACGTCTATTCAGGAAGTAGTCTCATGTTTAGGGAAACTGAAAGATCTTAAGTACGAAGATCAAGGGCTTTTAAC AGAGGTACAGGAGAAACTTCGAGTTTTTGACTTTGTCAGGAAAGACATGGTGACAGAGTTTTTAGAGCTACAGCAGGTTG TGGCTCAAGAAGGACAATTTCTAGATTACCTAATCAATCAGGTGCAAAGCATATCACACAAACTTTTTGTACCTGATGTA AATATTGGAGCTCATTTAGCGGAGTTGTGTGGGTATTTACCTTCTGGTGATGTTCGAGTGGAGCGTTTAAAGAGATCTGC TCGTCAGGTTGTAGATCGCTTTATGAGGGTGACTTGTGACACGCGGAAGGTGGCAATGGCTTTTGACGAGAATGCCTGTG GAGTGGCAAAAAATGCCTTTGATAAGGCTTTTGGGGCATTAGAAGAGTGTGTGTATAAGAGTCTGACAGAGAGTTATAGA GAGGCATTTTATGAATATGAGAAGGCGAAGATCCTTAGGAATGAAGATGTAGAATGGCTGCAGGATAAGAATAAGAGCGC ACGTGCTGAGCAGAGATTTAGGGAAGTCAAGGATCGTTGGGAGGACTTAAAGGAAACGGTCTTTTGGGTAAAAGAAAACG GTTGTATTGACCTAGAAGTGCTCACTGCAGTGGGTGGGTGGCCGGATCGTGGTCCAGAGCATCTTATTCCTGAAAAAAGA AGGAATAAGGTAATGAGCCATAAATTATGGGAGGCGACTATGCGAATGAAGGGAGCAGAAGGAACGTATAGTGTAGCAAG AGTCGCCTTTGAAAAGGATGGATCTAGAAAGAATCAGAAGAAATTCCAAGAAAAGACAAAAGAGTGGTTGCGATGTTTAA AGGATTTGCATGATCAGGAGTGTCATCGTGCACGGGAGAGATTGGCAGAACTTGAAGCTTTGTATCCTGAGGTTTCAGTC TCTGTAGTAGAGACGGAGAGAGAGACAAAATTTAAATTAGAGACTGCTTATGGGAATCTCGAAGAGCGCTATCAGAGCGT TGTGCGAGATCAGGAGGACTACTGGAAAGAAGAAGAAAACAAGGAAGCAGAGTTTAGGGAAAAAGGAACAAAGGTTCGCT CTCCAGAGGAGGTGGTAGAGTATCTTCAGATCTTAGAAAATCTGTTGGAAGACTGTTCTAAGCAATTAACTATAGCGGAA GTGGTTGTCTTAGGTGTAGAGCTGGAAGCTACAGCAGAGTTCGAGTATACCATACTCTCTGATGCAGCGAATCGTCTTAA GGTTTTATGTGAAGATATTGAGGACATCCTGCCTCGAGTCGAAGAAATAGAAATCATGCTACGTATAGCAGAGCTTCCAT TCCTTCCTATAAAGCAAGCATTTACTAAGGCCTTTTTACAATATAACAGCTGTAAAGATAAGTTAGCAAAGGTGGAGCCC TACTGTCAGGAGAGCGTGGACTATAGAAGAAACAAAGAGCGGTTTCAGAGTTTGAATCAGGATTTACAAAATGTATACCA AGAGTGCCAGAAGGCTACAGGTTTAGAATCGGAAGTGAGTGCATATAGAGATCATCTTAGAGAGCAGATCACAGAGTTTG AAACTCAAGGGCTGGACGTGATAAAAGAAGAACTTCTTTTTGTGAGTAGTACTCTCAAAAGTAAATTGAGCTATGATCCA TTAATAGCAGACATTCCCTGTATGAAGTTTTATGAGGAGTATTATGATGGCATTGATAAAGCGAGAGTTCAATCCCGATG GCTGGAGAAGTCTGAGAGGTATAGAAAGGCGAAGAAGGGATTCCAAGAGATGCTGAAGGAAGGCCTATTCAAAGAAGATC AGGCTTTGAAAAAAGCAGAGTATAGATTACTTCGAGAGAAGAGAATGAATAAGGAGAAGCTTTTGATTTGCAATAAGATA GAAGCAGCTCAGCAGCGAGTCCAAGAATTTGGACCCTCGGATTCATAA
Upstream 100 bases:
>100_bases CACGTATCACCCACCACAGCTACCCCCCGATCACTCGGTAGGGGCTACTTCTTGGCAACCTAAGCTTCGTATTTTAACCA TTACTTTTTTAGTTCTTGGT
Downstream 100 bases:
>100_bases TGAAAAATGACATATCGGCTCTTCTCCCTCTGATATTTCAGGAGTCTCAAGCAATGTTTTTCGCCTAGTGCTCTATTTTG GCTAAATTTTAGAGAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MLLLISGALFLTLGVPGLAAGLSFGLGIGLSALGGVLVVSGLLFFLIRRGVSKVRPEEIPVTPSHEAQKILCQLPQELDQ LDTSIQEVVSCLGKLKDLKYEDQGLLTEVQEKLRVFDFVRKDMVTEFLELQQVVAQEGQFLDYLINQVQSISHKLFVPDV NIGAHLAELCGYLPSGDVRVERLKRSARQVVDRFMRVTCDTRKVAMAFDENACGVAKNAFDKAFGALEECVYKSLTESYR EAFYEYEKAKILRNEDVEWLQDKNKSARAEQRFREVKDRWEDLKETVFWVKENGCIDLEVLTAVGGWPDRGPEHLIPEKR RNKVMSHKLWEATMRMKGAEGTYSVARVAFEKDGSRKNQKKFQEKTKEWLRCLKDLHDQECHRARERLAELEALYPEVSV SVVETERETKFKLETAYGNLEERYQSVVRDQEDYWKEEENKEAEFREKGTKVRSPEEVVEYLQILENLLEDCSKQLTIAE VVVLGVELEATAEFEYTILSDAANRLKVLCEDIEDILPRVEEIEIMLRIAELPFLPIKQAFTKAFLQYNSCKDKLAKVEP YCQESVDYRRNKERFQSLNQDLQNVYQECQKATGLESEVSAYRDHLREQITEFETQGLDVIKEELLFVSSTLKSKLSYDP LIADIPCMKFYEEYYDGIDKARVQSRWLEKSERYRKAKKGFQEMLKEGLFKEDQALKKAEYRLLREKRMNKEKLLICNKI EAAQQRVQEFGPSDS
Sequences:
>Translated_735_residues MLLLISGALFLTLGVPGLAAGLSFGLGIGLSALGGVLVVSGLLFFLIRRGVSKVRPEEIPVTPSHEAQKILCQLPQELDQ LDTSIQEVVSCLGKLKDLKYEDQGLLTEVQEKLRVFDFVRKDMVTEFLELQQVVAQEGQFLDYLINQVQSISHKLFVPDV NIGAHLAELCGYLPSGDVRVERLKRSARQVVDRFMRVTCDTRKVAMAFDENACGVAKNAFDKAFGALEECVYKSLTESYR EAFYEYEKAKILRNEDVEWLQDKNKSARAEQRFREVKDRWEDLKETVFWVKENGCIDLEVLTAVGGWPDRGPEHLIPEKR RNKVMSHKLWEATMRMKGAEGTYSVARVAFEKDGSRKNQKKFQEKTKEWLRCLKDLHDQECHRARERLAELEALYPEVSV SVVETERETKFKLETAYGNLEERYQSVVRDQEDYWKEEENKEAEFREKGTKVRSPEEVVEYLQILENLLEDCSKQLTIAE VVVLGVELEATAEFEYTILSDAANRLKVLCEDIEDILPRVEEIEIMLRIAELPFLPIKQAFTKAFLQYNSCKDKLAKVEP YCQESVDYRRNKERFQSLNQDLQNVYQECQKATGLESEVSAYRDHLREQITEFETQGLDVIKEELLFVSSTLKSKLSYDP LIADIPCMKFYEEYYDGIDKARVQSRWLEKSERYRKAKKGFQEMLKEGLFKEDQALKKAEYRLLREKRMNKEKLLICNKI EAAQQRVQEFGPSDS >Mature_735_residues MLLLISGALFLTLGVPGLAAGLSFGLGIGLSALGGVLVVSGLLFFLIRRGVSKVRPEEIPVTPSHEAQKILCQLPQELDQ LDTSIQEVVSCLGKLKDLKYEDQGLLTEVQEKLRVFDFVRKDMVTEFLELQQVVAQEGQFLDYLINQVQSISHKLFVPDV NIGAHLAELCGYLPSGDVRVERLKRSARQVVDRFMRVTCDTRKVAMAFDENACGVAKNAFDKAFGALEECVYKSLTESYR EAFYEYEKAKILRNEDVEWLQDKNKSARAEQRFREVKDRWEDLKETVFWVKENGCIDLEVLTAVGGWPDRGPEHLIPEKR RNKVMSHKLWEATMRMKGAEGTYSVARVAFEKDGSRKNQKKFQEKTKEWLRCLKDLHDQECHRARERLAELEALYPEVSV SVVETERETKFKLETAYGNLEERYQSVVRDQEDYWKEEENKEAEFREKGTKVRSPEEVVEYLQILENLLEDCSKQLTIAE VVVLGVELEATAEFEYTILSDAANRLKVLCEDIEDILPRVEEIEIMLRIAELPFLPIKQAFTKAFLQYNSCKDKLAKVEP YCQESVDYRRNKERFQSLNQDLQNVYQECQKATGLESEVSAYRDHLREQITEFETQGLDVIKEELLFVSSTLKSKLSYDP LIADIPCMKFYEEYYDGIDKARVQSRWLEKSERYRKAKKGFQEMLKEGLFKEDQALKKAEYRLLREKRMNKEKLLICNKI EAAQQRVQEFGPSDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85141; Mature: 85141
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLISGALFLTLGVPGLAAGLSFGLGIGLSALGGVLVVSGLLFFLIRRGVSKVRPEEIP CEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VTPSHEAQKILCQLPQELDQLDTSIQEVVSCLGKLKDLKYEDQGLLTEVQEKLRVFDFVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH KDMVTEFLELQQVVAQEGQFLDYLINQVQSISHKLFVPDVNIGAHLAELCGYLPSGDVRV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCCHHH ERLKRSARQVVDRFMRVTCDTRKVAMAFDENACGVAKNAFDKAFGALEECVYKSLTESYR HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAFYEYEKAKILRNEDVEWLQDKNKSARAEQRFREVKDRWEDLKETVFWVKENGCIDLEV HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH LTAVGGWPDRGPEHLIPEKRRNKVMSHKLWEATMRMKGAEGTYSVARVAFEKDGSRKNQK HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH KFQEKTKEWLRCLKDLHDQECHRARERLAELEALYPEVSVSVVETERETKFKLETAYGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHEEHHHHHCCH EERYQSVVRDQEDYWKEEENKEAEFREKGTKVRSPEEVVEYLQILENLLEDCSKQLTIAE HHHHHHHHHCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVVLGVELEATAEFEYTILSDAANRLKVLCEDIEDILPRVEEIEIMLRIAELPFLPIKQA HHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FTKAFLQYNSCKDKLAKVEPYCQESVDYRRNKERFQSLNQDLQNVYQECQKATGLESEVS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AYRDHLREQITEFETQGLDVIKEELLFVSSTLKSKLSYDPLIADIPCMKFYEEYYDGIDK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCHHH ARVQSRWLEKSERYRKAKKGFQEMLKEGLFKEDQALKKAEYRLLREKRMNKEKLLICNKI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EAAQQRVQEFGPSDS HHHHHHHHHCCCCCC >Mature Secondary Structure MLLLISGALFLTLGVPGLAAGLSFGLGIGLSALGGVLVVSGLLFFLIRRGVSKVRPEEIP CEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VTPSHEAQKILCQLPQELDQLDTSIQEVVSCLGKLKDLKYEDQGLLTEVQEKLRVFDFVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH KDMVTEFLELQQVVAQEGQFLDYLINQVQSISHKLFVPDVNIGAHLAELCGYLPSGDVRV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCCHHH ERLKRSARQVVDRFMRVTCDTRKVAMAFDENACGVAKNAFDKAFGALEECVYKSLTESYR HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAFYEYEKAKILRNEDVEWLQDKNKSARAEQRFREVKDRWEDLKETVFWVKENGCIDLEV HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH LTAVGGWPDRGPEHLIPEKRRNKVMSHKLWEATMRMKGAEGTYSVARVAFEKDGSRKNQK HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH KFQEKTKEWLRCLKDLHDQECHRARERLAELEALYPEVSVSVVETERETKFKLETAYGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHEEHHHHHCCH EERYQSVVRDQEDYWKEEENKEAEFREKGTKVRSPEEVVEYLQILENLLEDCSKQLTIAE HHHHHHHHHCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVVLGVELEATAEFEYTILSDAANRLKVLCEDIEDILPRVEEIEIMLRIAELPFLPIKQA HHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FTKAFLQYNSCKDKLAKVEPYCQESVDYRRNKERFQSLNQDLQNVYQECQKATGLESEVS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AYRDHLREQITEFETQGLDVIKEELLFVSSTLKSKLSYDPLIADIPCMKFYEEYYDGIDK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCHHH ARVQSRWLEKSERYRKAKKGFQEMLKEGLFKEDQALKKAEYRLLREKRMNKEKLLICNKI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EAAQQRVQEFGPSDS HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA