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The map label for this gene is ybaB

Identifier: 15835576

GI number: 15835576

Start: 53631

End: 53921

Strand: Reverse

Name: ybaB

Synonym: CPj0039

Alternate gene names: 15835576

Gene position: 53921-53631 (Counterclockwise)

Preceding gene: 15835577

Following gene: 15835572

Centisome position: 4.4

GC content: 41.92

Gene sequence:

>291_bases
ATGGGCAGCGGATACGCTAAGAAAAAAAAAGAAGCTAAAATTATGGAACAGCAATTCCTAGAAATGGAGGCCTCACTATT
AGAAAAGCGTTACGAAGGGCAAGCTGGCAACGGTCTTGTCTCTGTTGTCATCAACGGAAAGTGTGACTTAATTTCAGTAA
AAGTACAACCTACGTGCTTAGACCCTGAAGATCCAGAAGTCATTGAAGACTTGTTCCGTGCTGCATTCAAACTTGCAAAA
GAGCAGATGGATCAAGAAATGTCTCTTATGCGTTCCACAATGCCTTTCTAG

Upstream 100 bases:

>100_bases
GCTGTTGTAGAATTTTCAGGAATTTTAAGACAATAAGCAAGAACCTCTTAGAAAATTTCATGAGAGGAAAGATCAATATT
TCACCTAAGGATAGATAAGC

Downstream 100 bases:

>100_bases
AACTAGAGATCCGCCGTGGAGTTGGTATTTTTTCCTATTGCACATTGGCACGACTAGAAAACACAGTTTTTACAAACTTT
ATACATCATAAAAGATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MGSGYAKKKKEAKIMEQQFLEMEASLLEKRYEGQAGNGLVSVVINGKCDLISVKVQPTCLDPEDPEVIEDLFRAAFKLAK
EQMDQEMSLMRSTMPF

Sequences:

>Translated_96_residues
MGSGYAKKKKEAKIMEQQFLEMEASLLEKRYEGQAGNGLVSVVINGKCDLISVKVQPTCLDPEDPEVIEDLFRAAFKLAK
EQMDQEMSLMRSTMPF
>Mature_95_residues
GSGYAKKKKEAKIMEQQFLEMEASLLEKRYEGQAGNGLVSVVINGKCDLISVKVQPTCLDPEDPEVIEDLFRAAFKLAKE
QMDQEMSLMRSTMPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y039_CHLPN (Q9Z9E2)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A86496
- PIR:   B72127
- RefSeq:   NP_224247.1
- RefSeq:   NP_300100.1
- RefSeq:   NP_445278.1
- RefSeq:   NP_876319.1
- ProteinModelPortal:   Q9Z9E2
- SMR:   Q9Z9E2
- PHCI-2DPAGE:   Q9Z9E2
- GeneID:   1466726
- GeneID:   894808
- GeneID:   918831
- GeneID:   963167
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0736
- KEGG:   cpj:CPj0039
- KEGG:   cpn:CPn0039
- KEGG:   cpt:CpB0043
- TIGR:   CP_0736
- HOGENOM:   HBG734215
- OMA:   FRSAFKE
- ProtClustDB:   PRK00153
- BioCyc:   CPNE115711:CP_0736-MONOMER
- BioCyc:   CPNE115713:CPN0039-MONOMER
- BioCyc:   CPNE138677:CPJ0039-MONOMER
- BioCyc:   CPNE182082:CPB0043-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 10820; Mature: 10689

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGYAKKKKEAKIMEQQFLEMEASLLEKRYEGQAGNGLVSVVINGKCDLISVKVQPTCL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCC
DPEDPEVIEDLFRAAFKLAKEQMDQEMSLMRSTMPF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GSGYAKKKKEAKIMEQQFLEMEASLLEKRYEGQAGNGLVSVVINGKCDLISVKVQPTCL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCC
DPEDPEVIEDLFRAAFKLAKEQMDQEMSLMRSTMPF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362