| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835558
GI number: 15835558
Start: 32375
End: 34081
Strand: Reverse
Name: Not Available
Synonym: CPj0021
Alternate gene names: NA
Gene position: 34081-32375 (Counterclockwise)
Preceding gene: 15835559
Following gene: 15835557
Centisome position: 2.78
GC content: 44.23
Gene sequence:
>1707_bases ATGGGACTATTCCATCTAACTCTCTTTGGACTTTTATTGTGTAGTCTTCCCATTTCTCTTGTTGCTAAATTCCCTGAGTC TGTAGGTCATAAGATCCTTTATATAAGTACGCAATCTACACAGCAGGCCTTAGCAACATATCTGGAAGCTCTAGATGCCT ACGGTGATCATGACTTCTTCGTTTTAAGAAAAATCGGAGAAGACTATCTCAAGCAAAGCATCCACTCCTCAGATCCGCAA ACTAGAAAAAGCACCATCATTGGAGCAGGCCTGGCGGGATCTTCAGAAGCCTTGGACGTGCTCTCCCAAGCTATGGAAAC TGCAGACCCCCTGCAGCAGCTACTGGTTTTATCGGCAGTCTCAGGACATCTTGGGAAAACTTCTGACGACTTACTGTTTA AAGCTTTAGCATCTCCCTATCCTGTCATCCGCTTAGAAGCCGCCTATAGACTTGCTAATTTGAAGAACACTAAAGTCATT GATCATCTACATTCTTTCATTCATAAGCTTCCCGAAGAAATCCAATGCCTATCTGCGGCAATATTCCTACGCTTGGAGAC TGAAGAATCTGATGCTTATATTCGGGATCTCTTAGCTGCCAAGAAAAGCGCGATTCGGAGTGCCACAGCTTTGCAGATCG GAGAATACCAACAAAAACGCTTTCTTCCGACACTTAGGAATTTGCTAACGAGTGCGTCTCCTCAAGATCAAGAAGCTATT CTTTATGCTTTAGGGAAGCTTAAGGATGGTCAGAGCTACTACAATATAAAAAAGCAATTGCAGAAGCCTGATGTGGATGT CACTTTAGCAGCAGCTCAAGCTTTAATTGCTTTGGGGAAAGAAGAGGACGCTCTTCCCGTGATAAAAAAGCAAGCACTTG AGGAGCGGCCTCGAGCCCTGTATGCCTTACGGCATCTACCCTCTGAGATAGGGATTCCGATTGCCCTGCCGATATTCCTA AAAACTAAGAACAGCGAAGCCAAGTTGAATGTAGCTTTAGCTCTCTTAGAGTTAGGGTGTGACACCCCTAAACTACTGGA ATACATTACCGAAAGGCTTGTCCAACCACATTATAATGAGACTCTAGCCTTGAGTTTCTCTAAGGGGCGTACTTTACAAA ATTGGAAGCGGGTGAACATCATAGTCCCTCAAGATCCCCAGGAGAGGGAAAGGTTGCTCTCCACAACCCGAGGTCTTGAA GAGCAGATCCTTACGTTTCTCTTCCGCCTACCTAAAGAAGCTTACCTCCCCTGTATTTATAAGCTTTTGGCGAGTCAGAA AACTCAGCTTGCCACTACTGCGATTTCTTTTTTAAGTCACACCTCACATCAGGAAGCCTTAGATCTACTTTTCCAAGCTG CGAAGCTTCCTGGAGAACCTATCATCCGCGCCTATGCAGATCTTGCTATTTATAATCTCACCAAAGATCCTGAAAAAAAA CGTTCTCTCCATGATTATGCAAAAAAGCTAATTCAGGAAACCTTGTTATTTGTGGACACGGAAAACCAAAGACCCCATCC CAGCATGCCCTATCTACGTTATCAGGTCACCCCAGAAAGCCGTACGAAGCTCATGTTGGATATTCTAGAGACACTAGCCA CCTCGAAGTCTTCCGAAGATATCCGTTTATTGATACAACTGATGACGGAAGGAGATGCAAAAAATTTCCCAGTCCTTGCA GGCTTACTCATAAAAATTGTGGAGTAA
Upstream 100 bases:
>100_bases GTGGCTTGATTTTGAAAAAGGTCCATGGATGTGTTTATAATGTTCAAGGTCTCCCTATCCAAACATTGAAATACTTGCTA GAGGAGTTGAACATCGATCT
Downstream 100 bases:
>100_bases CCCCAACCTACGTCTTATGAAACGTTGCTTCTTATTTCTAGCTTCCTTTGTTCTTATGGGTTCCTCAGCTGATGCTTTGA CTCATCAAGAGGCTGTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MGLFHLTLFGLLLCSLPISLVAKFPESVGHKILYISTQSTQQALATYLEALDAYGDHDFFVLRKIGEDYLKQSIHSSDPQ TRKSTIIGAGLAGSSEALDVLSQAMETADPLQQLLVLSAVSGHLGKTSDDLLFKALASPYPVIRLEAAYRLANLKNTKVI DHLHSFIHKLPEEIQCLSAAIFLRLETEESDAYIRDLLAAKKSAIRSATALQIGEYQQKRFLPTLRNLLTSASPQDQEAI LYALGKLKDGQSYYNIKKQLQKPDVDVTLAAAQALIALGKEEDALPVIKKQALEERPRALYALRHLPSEIGIPIALPIFL KTKNSEAKLNVALALLELGCDTPKLLEYITERLVQPHYNETLALSFSKGRTLQNWKRVNIIVPQDPQERERLLSTTRGLE EQILTFLFRLPKEAYLPCIYKLLASQKTQLATTAISFLSHTSHQEALDLLFQAAKLPGEPIIRAYADLAIYNLTKDPEKK RSLHDYAKKLIQETLLFVDTENQRPHPSMPYLRYQVTPESRTKLMLDILETLATSKSSEDIRLLIQLMTEGDAKNFPVLA GLLIKIVE
Sequences:
>Translated_568_residues MGLFHLTLFGLLLCSLPISLVAKFPESVGHKILYISTQSTQQALATYLEALDAYGDHDFFVLRKIGEDYLKQSIHSSDPQ TRKSTIIGAGLAGSSEALDVLSQAMETADPLQQLLVLSAVSGHLGKTSDDLLFKALASPYPVIRLEAAYRLANLKNTKVI DHLHSFIHKLPEEIQCLSAAIFLRLETEESDAYIRDLLAAKKSAIRSATALQIGEYQQKRFLPTLRNLLTSASPQDQEAI LYALGKLKDGQSYYNIKKQLQKPDVDVTLAAAQALIALGKEEDALPVIKKQALEERPRALYALRHLPSEIGIPIALPIFL KTKNSEAKLNVALALLELGCDTPKLLEYITERLVQPHYNETLALSFSKGRTLQNWKRVNIIVPQDPQERERLLSTTRGLE EQILTFLFRLPKEAYLPCIYKLLASQKTQLATTAISFLSHTSHQEALDLLFQAAKLPGEPIIRAYADLAIYNLTKDPEKK RSLHDYAKKLIQETLLFVDTENQRPHPSMPYLRYQVTPESRTKLMLDILETLATSKSSEDIRLLIQLMTEGDAKNFPVLA GLLIKIVE >Mature_567_residues GLFHLTLFGLLLCSLPISLVAKFPESVGHKILYISTQSTQQALATYLEALDAYGDHDFFVLRKIGEDYLKQSIHSSDPQT RKSTIIGAGLAGSSEALDVLSQAMETADPLQQLLVLSAVSGHLGKTSDDLLFKALASPYPVIRLEAAYRLANLKNTKVID HLHSFIHKLPEEIQCLSAAIFLRLETEESDAYIRDLLAAKKSAIRSATALQIGEYQQKRFLPTLRNLLTSASPQDQEAIL YALGKLKDGQSYYNIKKQLQKPDVDVTLAAAQALIALGKEEDALPVIKKQALEERPRALYALRHLPSEIGIPIALPIFLK TKNSEAKLNVALALLELGCDTPKLLEYITERLVQPHYNETLALSFSKGRTLQNWKRVNIIVPQDPQERERLLSTTRGLEE QILTFLFRLPKEAYLPCIYKLLASQKTQLATTAISFLSHTSHQEALDLLFQAAKLPGEPIIRAYADLAIYNLTKDPEKKR SLHDYAKKLIQETLLFVDTENQRPHPSMPYLRYQVTPESRTKLMLDILETLATSKSSEDIRLLIQLMTEGDAKNFPVLAG LLIKIVE
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63555; Mature: 63423
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFHLTLFGLLLCSLPISLVAKFPESVGHKILYISTQSTQQALATYLEALDAYGDHDFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHH VLRKIGEDYLKQSIHSSDPQTRKSTIIGAGLAGSSEALDVLSQAMETADPLQQLLVLSAV HHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGHLGKTSDDLLFKALASPYPVIRLEAAYRLANLKNTKVIDHLHSFIHKLPEEIQCLSAA HCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IFLRLETEESDAYIRDLLAAKKSAIRSATALQIGEYQQKRFLPTLRNLLTSASPQDQEAI HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LYALGKLKDGQSYYNIKKQLQKPDVDVTLAAAQALIALGKEEDALPVIKKQALEERPRAL HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YALRHLPSEIGIPIALPIFLKTKNSEAKLNVALALLELGCDTPKLLEYITERLVQPHYNE HHHHHCHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC TLALSFSKGRTLQNWKRVNIIVPQDPQERERLLSTTRGLEEQILTFLFRLPKEAYLPCIY EEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH KLLASQKTQLATTAISFLSHTSHQEALDLLFQAAKLPGEPIIRAYADLAIYNLTKDPEKK HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHH RSLHDYAKKLIQETLLFVDTENQRPHPSMPYLRYQVTPESRTKLMLDILETLATSKSSED HHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHH IRLLIQLMTEGDAKNFPVLAGLLIKIVE HHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure GLFHLTLFGLLLCSLPISLVAKFPESVGHKILYISTQSTQQALATYLEALDAYGDHDFF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHH VLRKIGEDYLKQSIHSSDPQTRKSTIIGAGLAGSSEALDVLSQAMETADPLQQLLVLSAV HHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGHLGKTSDDLLFKALASPYPVIRLEAAYRLANLKNTKVIDHLHSFIHKLPEEIQCLSAA HCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IFLRLETEESDAYIRDLLAAKKSAIRSATALQIGEYQQKRFLPTLRNLLTSASPQDQEAI HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LYALGKLKDGQSYYNIKKQLQKPDVDVTLAAAQALIALGKEEDALPVIKKQALEERPRAL HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YALRHLPSEIGIPIALPIFLKTKNSEAKLNVALALLELGCDTPKLLEYITERLVQPHYNE HHHHHCHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC TLALSFSKGRTLQNWKRVNIIVPQDPQERERLLSTTRGLEEQILTFLFRLPKEAYLPCIY EEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH KLLASQKTQLATTAISFLSHTSHQEALDLLFQAAKLPGEPIIRAYADLAIYNLTKDPEKK HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHH RSLHDYAKKLIQETLLFVDTENQRPHPSMPYLRYQVTPESRTKLMLDILETLATSKSSED HHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHH IRLLIQLMTEGDAKNFPVLAGLLIKIVE HHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA