| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835448
GI number: 15835448
Start: 969614
End: 970489
Strand: Reverse
Name: Not Available
Synonym: TC0834
Alternate gene names: NA
Gene position: 970489-969614 (Counterclockwise)
Preceding gene: 15835452
Following gene: 15835444
Centisome position: 90.45
GC content: 39.27
Gene sequence:
>876_bases TTGTTTATGAAGAAAGTTGTTTTTATTGCGGCAATTTTTAGTTCTATTGTCTTTTGGGAAAAGATCCCTTATTCACATAG AATCAAACAATTCGCTATGGATTATGGAGTAGAACTTGTTGAGAAAAGCTCGCAACTCGTTCGAAAAATTTCCGGTAATG AGCGTTTATGTGTATTCGAAAGACGTATATCTGAAGAGCAAGTTTTGGCGATGTTTGCAAAAGATAAAGCTTCTGCCGAA TTGCTTTTTGTTCCTCATGTTCTTATGCGTGTCCGATTTTCTGGAGAAGAAGATAAGCGCGCAGGAAGTCATGAAGGAGC TGTGCTTTGGAGCTTGTCCAATGGGGAAATGGTATTGAATACTGGATCTTGGACTTATTCTAAAGGCTTTAGAGAATGTC TCATGTTGAAGGCAGGAAAACAAGACGTACAACTTATGCAAATTTTAGCAGGTATGGGAGGAGCTGCTCCTAAAGAGGTG CTTTCTCAAGCTTTGTCTATGCGCAATGTTCGTGCTGATCGGGTAATCCGTGCGTGTCAGAAGAAAAAATTGATATTTAC TCATGATAATTTGATTTATAGCCACTTCCAGCAACCGCAACCAATCAAAGGGTGCATGACTGTATTTAATTCGTCTCCTG TTTGGTTAGCTAAACCAAAAGGAGCCACAGTTTGCTCGATTGTATACCCAGAAGATCGCATTCAAAATCTAGTAGAGATG ATCTTTGGAGACAACTTCTTTATTTTGAGTTCTGAGCATATTCATGTTCCCGTATACAAAGTTTCTATTGCCGCTTCGGA TAGTAGTGTTCGTGTTGAATATATTAATGCCATTACAGGAAAACCCTTCGATTTTGCCCCTTCTCATCGCAAATAG
Upstream 100 bases:
>100_bases GAAAAAGAGAATTTGTCAAATCTCTTACAGCTTTTGTTTAACAAAAAATAAAAAAACATTTGGAATAGGAGTTTTTATTT ATTAAAATAAATAAAAAGGT
Downstream 100 bases:
>100_bases CACCTTTGCTTTTTCTCTTGATCTCTATTGAGTACTCTTCTCTTTCTCTTTTTATCTCCCTAAAAAAACGAGGGTGGAAA TGCAGCCCCCTCGTTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MFMKKVVFIAAIFSSIVFWEKIPYSHRIKQFAMDYGVELVEKSSQLVRKISGNERLCVFERRISEEQVLAMFAKDKASAE LLFVPHVLMRVRFSGEEDKRAGSHEGAVLWSLSNGEMVLNTGSWTYSKGFRECLMLKAGKQDVQLMQILAGMGGAAPKEV LSQALSMRNVRADRVIRACQKKKLIFTHDNLIYSHFQQPQPIKGCMTVFNSSPVWLAKPKGATVCSIVYPEDRIQNLVEM IFGDNFFILSSEHIHVPVYKVSIAASDSSVRVEYINAITGKPFDFAPSHRK
Sequences:
>Translated_291_residues MFMKKVVFIAAIFSSIVFWEKIPYSHRIKQFAMDYGVELVEKSSQLVRKISGNERLCVFERRISEEQVLAMFAKDKASAE LLFVPHVLMRVRFSGEEDKRAGSHEGAVLWSLSNGEMVLNTGSWTYSKGFRECLMLKAGKQDVQLMQILAGMGGAAPKEV LSQALSMRNVRADRVIRACQKKKLIFTHDNLIYSHFQQPQPIKGCMTVFNSSPVWLAKPKGATVCSIVYPEDRIQNLVEM IFGDNFFILSSEHIHVPVYKVSIAASDSSVRVEYINAITGKPFDFAPSHRK >Mature_291_residues MFMKKVVFIAAIFSSIVFWEKIPYSHRIKQFAMDYGVELVEKSSQLVRKISGNERLCVFERRISEEQVLAMFAKDKASAE LLFVPHVLMRVRFSGEEDKRAGSHEGAVLWSLSNGEMVLNTGSWTYSKGFRECLMLKAGKQDVQLMQILAGMGGAAPKEV LSQALSMRNVRADRVIRACQKKKLIFTHDNLIYSHFQQPQPIKGCMTVFNSSPVWLAKPKGATVCSIVYPEDRIQNLVEM IFGDNFFILSSEHIHVPVYKVSIAASDSSVRVEYINAITGKPFDFAPSHRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32919; Mature: 32919
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMKKVVFIAAIFSSIVFWEKIPYSHRIKQFAMDYGVELVEKSSQLVRKISGNERLCVFE CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH RRISEEQVLAMFAKDKASAELLFVPHVLMRVRFSGEEDKRAGSHEGAVLWSLSNGEMVLN HHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCEEEE TGSWTYSKGFRECLMLKAGKQDVQLMQILAGMGGAAPKEVLSQALSMRNVRADRVIRACQ CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH KKKLIFTHDNLIYSHFQQPQPIKGCMTVFNSSPVWLAKPKGATVCSIVYPEDRIQNLVEM HCCEEEEECCHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEECCHHHHHHHHHH IFGDNFFILSSEHIHVPVYKVSIAASDSSVRVEYINAITGKPFDFAPSHRK HHCCCEEEEECCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MFMKKVVFIAAIFSSIVFWEKIPYSHRIKQFAMDYGVELVEKSSQLVRKISGNERLCVFE CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH RRISEEQVLAMFAKDKASAELLFVPHVLMRVRFSGEEDKRAGSHEGAVLWSLSNGEMVLN HHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCEEEE TGSWTYSKGFRECLMLKAGKQDVQLMQILAGMGGAAPKEVLSQALSMRNVRADRVIRACQ CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH KKKLIFTHDNLIYSHFQQPQPIKGCMTVFNSSPVWLAKPKGATVCSIVYPEDRIQNLVEM HCCEEEEECCHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEECCHHHHHHHHHH IFGDNFFILSSEHIHVPVYKVSIAASDSSVRVEYINAITGKPFDFAPSHRK HHCCCEEEEECCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA