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The map label for this gene is recO

Identifier: 15835369

GI number: 15835369

Start: 897070

End: 897774

Strand: Direct

Name: recO

Synonym: TC0755

Alternate gene names: 15835369

Gene position: 897070-897774 (Clockwise)

Preceding gene: 15835368

Following gene: 15835371

Centisome position: 83.61

GC content: 38.01

Gene sequence:

>705_bases
ATGCAAATCATCCTCCCAGGAATCGTTCTAACCCACTCTCCAGCAGAAAAACAACATGTCATAGCAAAAATCTTCTCTCC
TGCAGGGCTTCTCTCTGCCTTCGCAAAAAATGGAGCCTCTCTATCCTGTGATTTTCGAGAATCTCTGCTCCCTATTTCGT
TCAGCCTTTTTACCATTCAACATACTCCTCCCAAAATGCGAAAAGTACTACAAGGAGAACTGAAAAATCCGTTCACAACG
ATTAAAAATTCTTATCGACTATTGCAAAGCACCGGAAAAATGATTCAAGCCATTCTCAAAACACAATGGCAAGAAAAACC
TTCCCCCCAACTCTTTTCTCTTTTTTTAAACTTCCTTCAACGAATCCCTGAAACTCCTCATCCTTATTTTTTTTCTTCTA
TGTTCCTGCTTAAGCTTTTACAACATGAAGGAAGTTTAGATTTATCCCACTCCTGCACTCTGTGTAAAAGCTCTTTAGAA
TCCTCAACTGTTTATCGTCATGAAGGATCTCTATTTTGTGAAAAACATGCACACGAAAAAACTATCTTATTTAGCCAAGA
AGAAGAGCAAATTTTAAGAATTATTGTACAAGCGAAGAAGTTTCAAGAGCTTATGTGTTTAGCAGAGTTCCCTATCGATA
TCGACTCCAAAATCGACTCTCTATTTTCCTCTTTCCTCACAGAAAAAATGAACGTTCTTCCCTAA

Upstream 100 bases:

>100_bases
AAATGACAGGTTTTCTGTCCCCAGAAACAAAAACATTCGCCTTTTTCCAAGGGATTCCTTCATATTCTCAGCTTATAAAT
TTCTATATAGATACGTTTTC

Downstream 100 bases:

>100_bases
CTTCAGAAAGAGACAGCCTGGCTTAACGAAGAAGAATCGCCCCACCGTTACGAGTCTCTACATGGAAAGTAAGAGTAACA
GGAGCTTCTCCTACTAAAGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MQIILPGIVLTHSPAEKQHVIAKIFSPAGLLSAFAKNGASLSCDFRESLLPISFSLFTIQHTPPKMRKVLQGELKNPFTT
IKNSYRLLQSTGKMIQAILKTQWQEKPSPQLFSLFLNFLQRIPETPHPYFFSSMFLLKLLQHEGSLDLSHSCTLCKSSLE
SSTVYRHEGSLFCEKHAHEKTILFSQEEEQILRIIVQAKKFQELMCLAEFPIDIDSKIDSLFSSFLTEKMNVLP

Sequences:

>Translated_234_residues
MQIILPGIVLTHSPAEKQHVIAKIFSPAGLLSAFAKNGASLSCDFRESLLPISFSLFTIQHTPPKMRKVLQGELKNPFTT
IKNSYRLLQSTGKMIQAILKTQWQEKPSPQLFSLFLNFLQRIPETPHPYFFSSMFLLKLLQHEGSLDLSHSCTLCKSSLE
SSTVYRHEGSLFCEKHAHEKTILFSQEEEQILRIIVQAKKFQELMCLAEFPIDIDSKIDSLFSSFLTEKMNVLP
>Mature_234_residues
MQIILPGIVLTHSPAEKQHVIAKIFSPAGLLSAFAKNGASLSCDFRESLLPISFSLFTIQHTPPKMRKVLQGELKNPFTT
IKNSYRLLQSTGKMIQAILKTQWQEKPSPQLFSLFLNFLQRIPETPHPYFFSSMFLLKLLQHEGSLDLSHSCTLCKSSLE
SSTVYRHEGSLFCEKHAHEKTILFSQEEEQILRIIVQAKKFQELMCLAEFPIDIDSKIDSLFSSFLTEKMNVLP

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_CHLMU (Q9PJS3)

Other databases:

- EMBL:   AE002160
- PIR:   H81669
- RefSeq:   NP_297128.1
- GeneID:   1246119
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0755
- TIGR:   TC_0755
- HOGENOM:   HBG414088
- OMA:   LQYEGIL
- ProtClustDB:   PRK00085
- BioCyc:   CMUR243161:TC_0755-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- InterPro:   IPR001781
- Gene3D:   G3DSA:2.10.110.10
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26658; Mature: 26658

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIILPGIVLTHSPAEKQHVIAKIFSPAGLLSAFAKNGASLSCDFRESLLPISFSLFTIQ
CEEEECCEEEECCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEEHHHHHCCCCEEEEEEEE
HTPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQEKPSPQLFSLFLNFLQ
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RIPETPHPYFFSSMFLLKLLQHEGSLDLSHSCTLCKSSLESSTVYRHEGSLFCEKHAHEK
HCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHCCCC
TILFSQEEEQILRIIVQAKKFQELMCLAEFPIDIDSKIDSLFSSFLTEKMNVLP
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQIILPGIVLTHSPAEKQHVIAKIFSPAGLLSAFAKNGASLSCDFRESLLPISFSLFTIQ
CEEEECCEEEECCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEEHHHHHCCCCEEEEEEEE
HTPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQEKPSPQLFSLFLNFLQ
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RIPETPHPYFFSSMFLLKLLQHEGSLDLSHSCTLCKSSLESSTVYRHEGSLFCEKHAHEK
HCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHCCCC
TILFSQEEEQILRIIVQAKKFQELMCLAEFPIDIDSKIDSLFSSFLTEKMNVLP
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935