| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835250
GI number: 15835250
Start: 760882
End: 762996
Strand: Reverse
Name: Not Available
Synonym: TC0635
Alternate gene names: 15835250
Gene position: 762996-760882 (Counterclockwise)
Preceding gene: 15835253
Following gene: 15835249
Centisome position: 71.11
GC content: 39.15
Gene sequence:
>2115_bases ATGACTGCGGACCGCCCTTTTACGAATAAACTCATTTCTGAAAAATCTCCTTACCTCCTTCTCTATGCCCACACCCCAGT GGATTGGTATCCCTGGTCTGCAGAAGCTTTTCAGAAAGCATCAGCGGAAGATAAGCCGATCTTTTTGTCTATAGGCTGCA CGCATTCTAAATGGTGCCAAGTCATGCTTAAAGAAAATTACGAAAATCCAGAAGTTGCAGCCATTCTAAATGAGTATTTT ATTTGTATTAAGGTAGATAAAGAGGAACTTCCTCATTTAGCAAATCTTTATTTCGAATTATCTCAGCTGCTGTCAGTATC CGGGGAAGTTCAGGATTCTCCGACTTGGCCGCTACATGTATTCCTAACACCCAACCTTTTACCTTTTTTTAGCTTGGGAT ATTCCGGCTTTTCAGGGAAAACAGGAGCTATTTCTTTTATTCAAATGTTAGAAAAACTTCATGTTATGTGGGAGGATCGA GAGGATCGAGAGGTATTTGTTCAACAAGCAGAAAAAGTAATGGAAGTGGCTTCCTTTCTAGAGGGGTGTTCTTGTAAAAA AGAGTCTCTAAAAGAGGGGATTTTGAAGCAGGTAACGGAAGCTATTTACAGAGATGTGGATGCCCAATTTGGAGGCGTTA AGTCGTTCCCAAAAACGTTGCCAGGTTTGCTTAGCCTATTTCTTCTAAGAGTAGGCGCAGAATATCAAGATGGAAGAGCT ATTTTCTTTGTAAATAGATCTTTACAATCCATAGCAAATGGAGGAATTTTTGATCATTTAGCTGGAGGGTTTTTCTGTTA CACGATTGATGATCGGTGGTTGATTCCCTGTTTTGAAAAAAGGGTGTTTGATAATGCTCTCATGATGCTTGTTTATGCTG AAGCCGGTGTATATATGAGAAATCCGGAGTTTATCATCACAGCTAAACGGGTGTTAACCTATCTAATCAAAGAGCTTTTA GATCCTACAACCGGAGCATTTTATCTCTCCGAGTACGGTCAGCAGTGGTCAAAAGCTGATATCGATAGTCAGTACACATG GTCTGGAGAAGAGATTCGCTCTTTGCTGGGAGATCAAGCGGAGATGTTTTGTGAGTACTACGACATATCTAGAGAGGGGA TTTATAATGGAAGAAATATCCTCCATATTTCTCCTTATATGAATAGAAAAGAAATAGCGGAGCGTTATCGATGTTCTCCG GAAGAACTTCAGGAAAAATTAGAGGGGTTACGAGAAAAATTACGGATCTATCGGTCTGAGAAAATTAAGTCTTTTAAAGA TGATCAGTCTTTAACATTTCACAATGGTTGGGGAATTTTTTCCTTAATAAAAACAGGGCTTATCTTAGGAGATCCTGAGT GTTTTTCAGTAGCTGAGAAATGCGGGGATTTTATCGCAAAAAATTTATGCAAAAATGGTCGATTATTACGTCGATGGCGA CAGGGTGAAGCTAAGTATTCTGCAGGATTAGAAGATTATGCCGCGGTTATTATGGGGGCTTTGGCTCTTTTTGAAATAGG ATCAGGAGCAAAGTGGCTAGTATTTGCCGAAGAGTTAATGAAGGAAGTACTGGTGTCTTTTCGATCCGAAACAGGGGGAT TTTATTCTACGGATGGAAGAGATGCTTCTCTATTGATAAAGAAAGCTTGTTTTATGGACGGAGATACCGTATCCAGCAAT GCGTTGCTTTGTCAGTGTTTATTAAAATTACATATCATTTCAGGTAAACGGCATTACCTTACATTTGCAGAAGATATTCT ACAATGCGTTCAAGGGAAGTGGTCTAAACATAAATTCTCTTCGTTAGGAAGTTTGCTTGCTGCTCAAGAGTATTTTTCTA AACATCATAGAAAGATTTTTATTTCTTTGGGGAATGAGCGTGATAGGGAGCAAGTATTGGATTGTTTTAAAGGCATTTTT CTTCCGCATACATCTTTTGTCTGGTTAACGGCTAAAGATCGGGAAATTTTGACAGCATGCCTTCCAGAAGGGGAAAGAGG ATTAATCCCTTCAGGAGAAAATCCAGTCACAAAAATCTATCTACTAGATAAGGATTGCGGGCGCTTATTTTCTTCCTTAG AACATTTTTACGAGTTTCTTTCTAAGCAAAGTTAA
Upstream 100 bases:
>100_bases TCTTCATTGGGATTTGTTAGATAAAAACAAATTTTTTTAGGAAAGTATAATTTTTGATTTTAAAATTAAAAATATACCTT TTGTTTTTTTTATTTTTATC
Downstream 100 bases:
>100_bases TTCGAGTTTTTTTGCTTGTTAGCTTTGATTTCTTCATAAAAGATATCTTTTTGTGTCCTTTGAGTTGAGGATATAACGCT TTTTTGTTAAAAGTGTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MTADRPFTNKLISEKSPYLLLYAHTPVDWYPWSAEAFQKASAEDKPIFLSIGCTHSKWCQVMLKENYENPEVAAILNEYF ICIKVDKEELPHLANLYFELSQLLSVSGEVQDSPTWPLHVFLTPNLLPFFSLGYSGFSGKTGAISFIQMLEKLHVMWEDR EDREVFVQQAEKVMEVASFLEGCSCKKESLKEGILKQVTEAIYRDVDAQFGGVKSFPKTLPGLLSLFLLRVGAEYQDGRA IFFVNRSLQSIANGGIFDHLAGGFFCYTIDDRWLIPCFEKRVFDNALMMLVYAEAGVYMRNPEFIITAKRVLTYLIKELL DPTTGAFYLSEYGQQWSKADIDSQYTWSGEEIRSLLGDQAEMFCEYYDISREGIYNGRNILHISPYMNRKEIAERYRCSP EELQEKLEGLREKLRIYRSEKIKSFKDDQSLTFHNGWGIFSLIKTGLILGDPECFSVAEKCGDFIAKNLCKNGRLLRRWR QGEAKYSAGLEDYAAVIMGALALFEIGSGAKWLVFAEELMKEVLVSFRSETGGFYSTDGRDASLLIKKACFMDGDTVSSN ALLCQCLLKLHIISGKRHYLTFAEDILQCVQGKWSKHKFSSLGSLLAAQEYFSKHHRKIFISLGNERDREQVLDCFKGIF LPHTSFVWLTAKDREILTACLPEGERGLIPSGENPVTKIYLLDKDCGRLFSSLEHFYEFLSKQS
Sequences:
>Translated_704_residues MTADRPFTNKLISEKSPYLLLYAHTPVDWYPWSAEAFQKASAEDKPIFLSIGCTHSKWCQVMLKENYENPEVAAILNEYF ICIKVDKEELPHLANLYFELSQLLSVSGEVQDSPTWPLHVFLTPNLLPFFSLGYSGFSGKTGAISFIQMLEKLHVMWEDR EDREVFVQQAEKVMEVASFLEGCSCKKESLKEGILKQVTEAIYRDVDAQFGGVKSFPKTLPGLLSLFLLRVGAEYQDGRA IFFVNRSLQSIANGGIFDHLAGGFFCYTIDDRWLIPCFEKRVFDNALMMLVYAEAGVYMRNPEFIITAKRVLTYLIKELL DPTTGAFYLSEYGQQWSKADIDSQYTWSGEEIRSLLGDQAEMFCEYYDISREGIYNGRNILHISPYMNRKEIAERYRCSP EELQEKLEGLREKLRIYRSEKIKSFKDDQSLTFHNGWGIFSLIKTGLILGDPECFSVAEKCGDFIAKNLCKNGRLLRRWR QGEAKYSAGLEDYAAVIMGALALFEIGSGAKWLVFAEELMKEVLVSFRSETGGFYSTDGRDASLLIKKACFMDGDTVSSN ALLCQCLLKLHIISGKRHYLTFAEDILQCVQGKWSKHKFSSLGSLLAAQEYFSKHHRKIFISLGNERDREQVLDCFKGIF LPHTSFVWLTAKDREILTACLPEGERGLIPSGENPVTKIYLLDKDCGRLFSSLEHFYEFLSKQS >Mature_703_residues TADRPFTNKLISEKSPYLLLYAHTPVDWYPWSAEAFQKASAEDKPIFLSIGCTHSKWCQVMLKENYENPEVAAILNEYFI CIKVDKEELPHLANLYFELSQLLSVSGEVQDSPTWPLHVFLTPNLLPFFSLGYSGFSGKTGAISFIQMLEKLHVMWEDRE DREVFVQQAEKVMEVASFLEGCSCKKESLKEGILKQVTEAIYRDVDAQFGGVKSFPKTLPGLLSLFLLRVGAEYQDGRAI FFVNRSLQSIANGGIFDHLAGGFFCYTIDDRWLIPCFEKRVFDNALMMLVYAEAGVYMRNPEFIITAKRVLTYLIKELLD PTTGAFYLSEYGQQWSKADIDSQYTWSGEEIRSLLGDQAEMFCEYYDISREGIYNGRNILHISPYMNRKEIAERYRCSPE ELQEKLEGLREKLRIYRSEKIKSFKDDQSLTFHNGWGIFSLIKTGLILGDPECFSVAEKCGDFIAKNLCKNGRLLRRWRQ GEAKYSAGLEDYAAVIMGALALFEIGSGAKWLVFAEELMKEVLVSFRSETGGFYSTDGRDASLLIKKACFMDGDTVSSNA LLCQCLLKLHIISGKRHYLTFAEDILQCVQGKWSKHKFSSLGSLLAAQEYFSKHHRKIFISLGNERDREQVLDCFKGIFL PHTSFVWLTAKDREILTACLPEGERGLIPSGENPVTKIYLLDKDCGRLFSSLEHFYEFLSKQS
Specific function: Unknown
COG id: COG1331
COG function: function code O; Highly conserved protein containing a thioredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=698, Percent_Identity=26.2177650429799, Blast_Score=243, Evalue=4e-64, Organism=Caenorhabditis elegans, GI25147430, Length=621, Percent_Identity=28.341384863124, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI20129985, Length=634, Percent_Identity=27.7602523659306, Blast_Score=211, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 80402; Mature: 80271
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00336 BETA_LACTAMASE_C
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADRPFTNKLISEKSPYLLLYAHTPVDWYPWSAEAFQKASAEDKPIFLSIGCTHSKWCQ CCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHH VMLKENYENPEVAAILNEYFICIKVDKEELPHLANLYFELSQLLSVSGEVQDSPTWPLHV HHHHCCCCCCHHHHHHHCCEEEEEECHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE FLTPNLLPFFSLGYSGFSGKTGAISFIQMLEKLHVMWEDREDREVFVQQAEKVMEVASFL EECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EGCSCKKESLKEGILKQVTEAIYRDVDAQFGGVKSFPKTLPGLLSLFLLRVGAEYQDGRA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE IFFVNRSLQSIANGGIFDHLAGGFFCYTIDDRWLIPCFEKRVFDNALMMLVYAEAGVYMR EEEECHHHHHHHCCCCHHHHCCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHCCCEEE NPEFIITAKRVLTYLIKELLDPTTGAFYLSEYGQQWSKADIDSQYTWSGEEIRSLLGDQA CCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHCHHH EMFCEYYDISREGIYNGRNILHISPYMNRKEIAERYRCSPEELQEKLEGLREKLRIYRSE HHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KIKSFKDDQSLTFHNGWGIFSLIKTGLILGDPECFSVAEKCGDFIAKNLCKNGRLLRRWR HHHCCCCCCCEEEECCCCHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH QGEAKYSAGLEDYAAVIMGALALFEIGSGAKWLVFAEELMKEVLVSFRSETGGFYSTDGR CCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCC DASLLIKKACFMDGDTVSSNALLCQCLLKLHIISGKRHYLTFAEDILQCVQGKWSKHKFS CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH SLGSLLAAQEYFSKHHRKIFISLGNERDREQVLDCFKGIFLPHTSFVWLTAKDREILTAC HHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH LPEGERGLIPSGENPVTKIYLLDKDCGRLFSSLEHFYEFLSKQS CCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TADRPFTNKLISEKSPYLLLYAHTPVDWYPWSAEAFQKASAEDKPIFLSIGCTHSKWCQ CCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHH VMLKENYENPEVAAILNEYFICIKVDKEELPHLANLYFELSQLLSVSGEVQDSPTWPLHV HHHHCCCCCCHHHHHHHCCEEEEEECHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE FLTPNLLPFFSLGYSGFSGKTGAISFIQMLEKLHVMWEDREDREVFVQQAEKVMEVASFL EECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EGCSCKKESLKEGILKQVTEAIYRDVDAQFGGVKSFPKTLPGLLSLFLLRVGAEYQDGRA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE IFFVNRSLQSIANGGIFDHLAGGFFCYTIDDRWLIPCFEKRVFDNALMMLVYAEAGVYMR EEEECHHHHHHHCCCCHHHHCCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHCCCEEE NPEFIITAKRVLTYLIKELLDPTTGAFYLSEYGQQWSKADIDSQYTWSGEEIRSLLGDQA CCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHCHHH EMFCEYYDISREGIYNGRNILHISPYMNRKEIAERYRCSPEELQEKLEGLREKLRIYRSE HHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KIKSFKDDQSLTFHNGWGIFSLIKTGLILGDPECFSVAEKCGDFIAKNLCKNGRLLRRWR HHHCCCCCCCEEEECCCCHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH QGEAKYSAGLEDYAAVIMGALALFEIGSGAKWLVFAEELMKEVLVSFRSETGGFYSTDGR CCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCC DASLLIKKACFMDGDTVSSNALLCQCLLKLHIISGKRHYLTFAEDILQCVQGKWSKHKFS CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH SLGSLLAAQEYFSKHHRKIFISLGNERDREQVLDCFKGIFLPHTSFVWLTAKDREILTAC HHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH LPEGERGLIPSGENPVTKIYLLDKDCGRLFSSLEHFYEFLSKQS CCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]