| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835232
GI number: 15835232
Start: 739987
End: 741519
Strand: Direct
Name: Not Available
Synonym: TC0617
Alternate gene names: NA
Gene position: 739987-741519 (Clockwise)
Preceding gene: 15835229
Following gene: 15835238
Centisome position: 68.97
GC content: 38.55
Gene sequence:
>1533_bases ATGTTAAGTCATCTTTGTACCACTGCATTTCTAACCTCATTACATCGCTTATCTTCCTTATGGATAAGACTATTGAATTC CTGCTCCGTTTTTCAAAGGCAACATCCCTTTTTCATTGGTGGAGCTTACTGGTTTGCAGGCATACTCGCTCATGAAGCTC CTATCTGCTGCGCACTCCTGATTGTAGCGCTCCATCCTTTTATTCCCAAATACTGCGTAAAAACTCTCTTCTTCTTTTTT CTTTGTTTTGGCTGCCCACTACTCTTTTCTCCTTTTGGAACTTCCACTTCAAATAAGCAGTTCACCGTTCCTGCTTCAAA AATACGCGTAGATAAAGGTCCTGCTTCCGGTTACTTTTTAGTTAAGAAAACAGGTAACAGAGCCTATTCAAGCATAGCTC TCTCTCTGGAAACAGAGAATAAACACTTCTATCAGGACCTTCCTTGTTCTCTTGTTTCCTCTACTCCATTGAATGAGCAG ACCATTTATCATCTACAAGGAATCATTTCCAAATCTTCATATCCCATTACTTTTCGCGTATCCAATCTTATAGAGAAAAC AGCCCTCAGTGCTCCTAAACTAAAAAATAACCCTTTTTCTTTTTTCCCTATTTTCAAAGAAAACTTCCGTAAGAGCCTCC ACAAGAAGCTCATTAACTTATTTCCTAACCAAGACATCGGAAGATTTTCTTCGAGTTTGATCCTTGGAACCCCTCTTCCC TACAAACAGAAAGAACTATTCAAAAGTAAAGGTCTCTCCCATCTTTTTTCTGTATCAGGATGGCATTTTTCATTGTTTGC CAACGTGCTATTCTTCGTATTAGGGGATATCCCTCCCAAAAAGCGTGGGCTGCTTGTGATGTTTCTATTATCTCTTCTCA ATCTGGTTTTCCCAACCTCTCCATCTGTATTTAGAAGCTGGTTCTCTTCTATTCTTTTCTGCTTAGCTCCTTTTTCTATA GGATACTGCTCTAGCTTAAATCGCTTAGGCATTAGTTTTATCTGCTGCTCTCTGATTTTTCCTCTATCATCCCCAGCTTT AATACTGAGCTTCCTAGCAACTTTAGGTATCTTATTTTTCTATACCCCTCTGCTACGTTTCTTTTATTCCCCCTGGAAAT TATTATTCGGAAATCGATGGTTTCTCTTTCCTATTCGTTTTTTGTTTACAACACTATCTATCTCGATTGCTGCTCAACTT TTTATCATTTTTCCCATGATTCGAATGTTTAAAATTCTTCCTTTAGATGGGCTTATCTACAACTTATTCTATCCAACACT CGTTGTACCAATCTTCCTGCTGATACCTTTATCCTTTTTCATTCCCCTTCTATCTCGATTTTCTGAATCTTATATCGCAT GGATCCTTACTCTTAACTGTCTGCACGCTCCTAATATCCTGATCTCATTAACATCAGCGCCCCTATCTTTAGAATGGATC TCTCTTTTCTCCATTCTTCTCTTTTATCTAGGCGTCTTTTTATCTACAGGAAAAGCTTCTAACCCATCTGTAAACCACTC GATTATCATCTGA
Upstream 100 bases:
>100_bases CTAGGCAATTGAGGGACTTTAGTAGCTATTTCTTCCCAAGTAAGCGTTCTGCGCATCTGCTCCAAAGAAAAAACTTCTGC CTGTTGCTTAGAAAAAGCTG
Downstream 100 bases:
>100_bases ATCACTCCAAAAAAAAGCGCTCCCATGAGAGGGAGCGCTACTCTAAAGGAAGTACTCAAGAAATCTAAAACTCTGCCAAT GATTTCGCTTCTTGAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MLSHLCTTAFLTSLHRLSSLWIRLLNSCSVFQRQHPFFIGGAYWFAGILAHEAPICCALLIVALHPFIPKYCVKTLFFFF LCFGCPLLFSPFGTSTSNKQFTVPASKIRVDKGPASGYFLVKKTGNRAYSSIALSLETENKHFYQDLPCSLVSSTPLNEQ TIYHLQGIISKSSYPITFRVSNLIEKTALSAPKLKNNPFSFFPIFKENFRKSLHKKLINLFPNQDIGRFSSSLILGTPLP YKQKELFKSKGLSHLFSVSGWHFSLFANVLFFVLGDIPPKKRGLLVMFLLSLLNLVFPTSPSVFRSWFSSILFCLAPFSI GYCSSLNRLGISFICCSLIFPLSSPALILSFLATLGILFFYTPLLRFFYSPWKLLFGNRWFLFPIRFLFTTLSISIAAQL FIIFPMIRMFKILPLDGLIYNLFYPTLVVPIFLLIPLSFFIPLLSRFSESYIAWILTLNCLHAPNILISLTSAPLSLEWI SLFSILLFYLGVFLSTGKASNPSVNHSIII
Sequences:
>Translated_510_residues MLSHLCTTAFLTSLHRLSSLWIRLLNSCSVFQRQHPFFIGGAYWFAGILAHEAPICCALLIVALHPFIPKYCVKTLFFFF LCFGCPLLFSPFGTSTSNKQFTVPASKIRVDKGPASGYFLVKKTGNRAYSSIALSLETENKHFYQDLPCSLVSSTPLNEQ TIYHLQGIISKSSYPITFRVSNLIEKTALSAPKLKNNPFSFFPIFKENFRKSLHKKLINLFPNQDIGRFSSSLILGTPLP YKQKELFKSKGLSHLFSVSGWHFSLFANVLFFVLGDIPPKKRGLLVMFLLSLLNLVFPTSPSVFRSWFSSILFCLAPFSI GYCSSLNRLGISFICCSLIFPLSSPALILSFLATLGILFFYTPLLRFFYSPWKLLFGNRWFLFPIRFLFTTLSISIAAQL FIIFPMIRMFKILPLDGLIYNLFYPTLVVPIFLLIPLSFFIPLLSRFSESYIAWILTLNCLHAPNILISLTSAPLSLEWI SLFSILLFYLGVFLSTGKASNPSVNHSIII >Mature_510_residues MLSHLCTTAFLTSLHRLSSLWIRLLNSCSVFQRQHPFFIGGAYWFAGILAHEAPICCALLIVALHPFIPKYCVKTLFFFF LCFGCPLLFSPFGTSTSNKQFTVPASKIRVDKGPASGYFLVKKTGNRAYSSIALSLETENKHFYQDLPCSLVSSTPLNEQ TIYHLQGIISKSSYPITFRVSNLIEKTALSAPKLKNNPFSFFPIFKENFRKSLHKKLINLFPNQDIGRFSSSLILGTPLP YKQKELFKSKGLSHLFSVSGWHFSLFANVLFFVLGDIPPKKRGLLVMFLLSLLNLVFPTSPSVFRSWFSSILFCLAPFSI GYCSSLNRLGISFICCSLIFPLSSPALILSFLATLGILFFYTPLLRFFYSPWKLLFGNRWFLFPIRFLFTTLSISIAAQL FIIFPMIRMFKILPLDGLIYNLFYPTLVVPIFLLIPLSFFIPLLSRFSESYIAWILTLNCLHAPNILISLTSAPLSLEWI SLFSILLFYLGVFLSTGKASNPSVNHSIII
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57745; Mature: 57745
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHLCTTAFLTSLHRLSSLWIRLLNSCSVFQRQHPFFIGGAYWFAGILAHEAPICCALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHH IVALHPFIPKYCVKTLFFFFLCFGCPLLFSPFGTSTSNKQFTVPASKIRVDKGPASGYFL HHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCHHHEEECCCCCCCEEE VKKTGNRAYSSIALSLETENKHFYQDLPCSLVSSTPLNEQTIYHLQGIISKSSYPITFRV EEECCCCCEEEEEEEEECCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEH SNLIEKTALSAPKLKNNPFSFFPIFKENFRKSLHKKLINLFPNQDIGRFSSSLILGTPLP HHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEECCCCC YKQKELFKSKGLSHLFSVSGWHFSLFANVLFFVLGDIPPKKRGLLVMFLLSLLNLVFPTS CHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC PSVFRSWFSSILFCLAPFSIGYCSSLNRLGISFICCSLIFPLSSPALILSFLATLGILFF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YTPLLRFFYSPWKLLFGNRWFLFPIRFLFTTLSISIAAQLFIIFPMIRMFKILPLDGLIY HHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH NLFYPTLVVPIFLLIPLSFFIPLLSRFSESYIAWILTLNCLHAPNILISLTSAPLSLEWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH SLFSILLFYLGVFLSTGKASNPSVNHSIII HHHHHHHHHHHHHHHCCCCCCCCCCCCEEC >Mature Secondary Structure MLSHLCTTAFLTSLHRLSSLWIRLLNSCSVFQRQHPFFIGGAYWFAGILAHEAPICCALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHH IVALHPFIPKYCVKTLFFFFLCFGCPLLFSPFGTSTSNKQFTVPASKIRVDKGPASGYFL HHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCHHHEEECCCCCCCEEE VKKTGNRAYSSIALSLETENKHFYQDLPCSLVSSTPLNEQTIYHLQGIISKSSYPITFRV EEECCCCCEEEEEEEEECCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEH SNLIEKTALSAPKLKNNPFSFFPIFKENFRKSLHKKLINLFPNQDIGRFSSSLILGTPLP HHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEECCCCC YKQKELFKSKGLSHLFSVSGWHFSLFANVLFFVLGDIPPKKRGLLVMFLLSLLNLVFPTS CHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC PSVFRSWFSSILFCLAPFSIGYCSSLNRLGISFICCSLIFPLSSPALILSFLATLGILFF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YTPLLRFFYSPWKLLFGNRWFLFPIRFLFTTLSISIAAQLFIIFPMIRMFKILPLDGLIY HHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH NLFYPTLVVPIFLLIPLSFFIPLLSRFSESYIAWILTLNCLHAPNILISLTSAPLSLEWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH SLFSILLFYLGVFLSTGKASNPSVNHSIII HHHHHHHHHHHHHHHCCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA