| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835122
GI number: 15835122
Start: 609935
End: 610468
Strand: Direct
Name: Not Available
Synonym: TC0504
Alternate gene names: NA
Gene position: 609935-610468 (Clockwise)
Preceding gene: 15835121
Following gene: 15835123
Centisome position: 56.85
GC content: 43.45
Gene sequence:
>534_bases ATGACCTACCCCGTATCCGATACATCAGGAAGAGCCGTATCTTCTTGCCCCACTTCCCCATCTTCTCCAAAGAAAAAAGG ATTGGTCTCCCCTTCCGCTGCAGGCATTCAAGGGGGGCAAGGAGTCACTGTTTGGGGACCCGCAGACCCATTCTTTACGG TTCCGGTCTATCCGCAGCAGCTTGCTTCTATGCAAAATAATTTATTTATATTGCAAACAGAGGTCTCTTCTTTAAAGAAA AAATTAGTTCAATCTAATCAGCCACAGGGATCTTCTTTAGGACGAGGACCTCAATTCCTAGCAGCATGTTTAGTTGCGAC AACAATCCTTGCTGTAGCTGTGATTGTCTTAGCCTCACTAGGTCTTGCCGGAATTCTTCCCTTTGTTATTGTTTGTCTGG CTGGAGCAACTAATGCCGTTTGGGCAATTGTTAGCGCTTCCATTGTTGCATTGATTTGTTGTACTTCTATCGCCAGCATC TTTCTAACAAAATATGACCGAACAACTTCAGAGAAAAATTTATATATAAACTAG
Upstream 100 bases:
>100_bases TCATTCACTATTTCTACCAAGCTTACTACTCAAGATAAGCTTTGCGATTAAAAAAAACTGTTGGAAATCAGTTTAATTAG GGAACAAAAATTGTAGCTCT
Downstream 100 bases:
>100_bases TATTTTGAATTAGAATTAATTTTTAAACTCCTTGAAATTAAGAATTAATTCTATTAACATGTTACTTTTTTTATAAAGGA AGACGAGCGTTGCGAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTYPVSDTSGRAVSSCPTSPSSPKKKGLVSPSAAGIQGGQGVTVWGPADPFFTVPVYPQQLASMQNNLFILQTEVSSLKK KLVQSNQPQGSSLGRGPQFLAACLVATTILAVAVIVLASLGLAGILPFVIVCLAGATNAVWAIVSASIVALICCTSIASI FLTKYDRTTSEKNLYIN
Sequences:
>Translated_177_residues MTYPVSDTSGRAVSSCPTSPSSPKKKGLVSPSAAGIQGGQGVTVWGPADPFFTVPVYPQQLASMQNNLFILQTEVSSLKK KLVQSNQPQGSSLGRGPQFLAACLVATTILAVAVIVLASLGLAGILPFVIVCLAGATNAVWAIVSASIVALICCTSIASI FLTKYDRTTSEKNLYIN >Mature_176_residues TYPVSDTSGRAVSSCPTSPSSPKKKGLVSPSAAGIQGGQGVTVWGPADPFFTVPVYPQQLASMQNNLFILQTEVSSLKKK LVQSNQPQGSSLGRGPQFLAACLVATTILAVAVIVLASLGLAGILPFVIVCLAGATNAVWAIVSASIVALICCTSIASIF LTKYDRTTSEKNLYIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18348; Mature: 18216
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPVSDTSGRAVSSCPTSPSSPKKKGLVSPSAAGIQGGQGVTVWGPADPFFTVPVYPQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCHHH LASMQNNLFILQTEVSSLKKKLVQSNQPQGSSLGRGPQFLAACLVATTILAVAVIVLASL HHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GLAGILPFVIVCLAGATNAVWAIVSASIVALICCTSIASIFLTKYDRTTSEKNLYIN CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC >Mature Secondary Structure TYPVSDTSGRAVSSCPTSPSSPKKKGLVSPSAAGIQGGQGVTVWGPADPFFTVPVYPQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCHHH LASMQNNLFILQTEVSSLKKKLVQSNQPQGSSLGRGPQFLAACLVATTILAVAVIVLASL HHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GLAGILPFVIVCLAGATNAVWAIVSASIVALICCTSIASIFLTKYDRTTSEKNLYIN CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA