Click here to switch to the map view.

The map label for this gene is ubiA

Identifier: 15835110

GI number: 15835110

Start: 599153

End: 600061

Strand: Direct

Name: ubiA

Synonym: TC0492

Alternate gene names: 15835110

Gene position: 599153-600061 (Clockwise)

Preceding gene: 15835109

Following gene: 15835111

Centisome position: 55.84

GC content: 36.3

Gene sequence:

>909_bases
ATGTCCAAAATTATATTGATTCAGCAGCTTATCAAATGTAAATATGCGTTATTCGCTCTTCTTTTTCTCGCTTCTTCCAC
ATTATTCTGCTTTTCTCTTCCAAACACCTCTCTCCCTTTATTCTCCTTAGCTACTATGAAAATTCTCTTTTTGGGAGGAA
GCGCATTTTTTGTTGCTAGAGCTTTTGGAATGATCGTAAATCAAATTGTGGACTGTGCTATAGACAAACGCAACCCTCGT
ACCAAAATGCGCGTACTGCCAGCAGGACTTCTTTCTACTAAAAACTCTGTTCTGCTTTTGATTCTTTGTCTTGTTCTATT
CTTGAGCTTTTGCTGGTTCTTTAATCCTTTATGCTTCGCTCTTGCTGTTTTAGCTACTCTTGTTATGATTATTTATCCCT
ATACGAAACGCTTTACGTTTCTTTGTCACTGGATTTTAGGGTCCGTATACTATCTAGCAATATTAATGAACTGTTTCACA
ATCATCCCCACCCCTTCTTTCTCCCTGTTTTGTATGGCCTCGTTATTAGGCGTTTCTTTTGGAATGATTATTGCTGCGAA
TGATATCATTTATGCTATCCAGGATTTGGAATTCGATCAAAAAGAAGAGCTTTTCAGTATTCCTGCACGGTTTGGAATAA
AACAATCCATTAAAATAGCTTCCATAAGTTTAACCATTAGCGCAATAGCTTACCTACTCCTAGGCTACTTTGTTCCTAAT
AAAACAGTTTTCTATTTATGCTCCCTTTTGCCTTTAGCTGGTATTCTCTGCACAATCAAACATTATTCTTTGATTAACCT
AGGATCTCAATCTGCTCTTCAGCAAAAATTTTTCCTTGGGAATCTTTTCTTAGGTATTACATTTCTTGCTAATATGATTG
GACTATTCTTATTAGGAGGAATCTCATGA

Upstream 100 bases:

>100_bases
ATGCGTTGAAACTATAGTTTCAACGCATTTTCCCCCTGGTCTATAATACATCCTATCCTAATATCTTATTCAGTCCGCAA
CCTGAAAATCAAAAGAGTTT

Downstream 100 bases:

>100_bases
AGCGCTATATTGTAGGCATTTCTGGAGCATCCGGGGCTATATTAGCGGTCACATTAGTTTCAGAACTCGCTAGATTAGGA
CATCATGTCGATGTCATTAT

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSKIILIQQLIKCKYALFALLFLASSTLFCFSLPNTSLPLFSLATMKILFLGGSAFFVARAFGMIVNQIVDCAIDKRNPR
TKMRVLPAGLLSTKNSVLLLILCLVLFLSFCWFFNPLCFALAVLATLVMIIYPYTKRFTFLCHWILGSVYYLAILMNCFT
IIPTPSFSLFCMASLLGVSFGMIIAANDIIYAIQDLEFDQKEELFSIPARFGIKQSIKIASISLTISAIAYLLLGYFVPN
KTVFYLCSLLPLAGILCTIKHYSLINLGSQSALQQKFFLGNLFLGITFLANMIGLFLLGGIS

Sequences:

>Translated_302_residues
MSKIILIQQLIKCKYALFALLFLASSTLFCFSLPNTSLPLFSLATMKILFLGGSAFFVARAFGMIVNQIVDCAIDKRNPR
TKMRVLPAGLLSTKNSVLLLILCLVLFLSFCWFFNPLCFALAVLATLVMIIYPYTKRFTFLCHWILGSVYYLAILMNCFT
IIPTPSFSLFCMASLLGVSFGMIIAANDIIYAIQDLEFDQKEELFSIPARFGIKQSIKIASISLTISAIAYLLLGYFVPN
KTVFYLCSLLPLAGILCTIKHYSLINLGSQSALQQKFFLGNLFLGITFLANMIGLFLLGGIS
>Mature_301_residues
SKIILIQQLIKCKYALFALLFLASSTLFCFSLPNTSLPLFSLATMKILFLGGSAFFVARAFGMIVNQIVDCAIDKRNPRT
KMRVLPAGLLSTKNSVLLLILCLVLFLSFCWFFNPLCFALAVLATLVMIIYPYTKRFTFLCHWILGSVYYLAILMNCFTI
IPTPSFSLFCMASLLGVSFGMIIAANDIIYAIQDLEFDQKEELFSIPARFGIKQSIKIASISLTISAIAYLLLGYFVPNK
TVFYLCSLLPLAGILCTIKHYSLINLGSQSALQQKFFLGNLFLGITFLANMIGLFLLGGIS

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 33557; Mature: 33426

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIILIQQLIKCKYALFALLFLASSTLFCFSLPNTSLPLFSLATMKILFLGGSAFFVAR
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH
AFGMIVNQIVDCAIDKRNPRTKMRVLPAGLLSTKNSVLLLILCLVLFLSFCWFFNPLCFA
HHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLATLVMIIYPYTKRFTFLCHWILGSVYYLAILMNCFTIIPTPSFSLFCMASLLGVSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GMIIAANDIIYAIQDLEFDQKEELFSIPARFGIKQSIKIASISLTISAIAYLLLGYFVPN
HHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCCC
KTVFYLCSLLPLAGILCTIKHYSLINLGSQSALQQKFFLGNLFLGITFLANMIGLFLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IS
CC
>Mature Secondary Structure 
SKIILIQQLIKCKYALFALLFLASSTLFCFSLPNTSLPLFSLATMKILFLGGSAFFVAR
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH
AFGMIVNQIVDCAIDKRNPRTKMRVLPAGLLSTKNSVLLLILCLVLFLSFCWFFNPLCFA
HHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLATLVMIIYPYTKRFTFLCHWILGSVYYLAILMNCFTIIPTPSFSLFCMASLLGVSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GMIIAANDIIYAIQDLEFDQKEELFSIPARFGIKQSIKIASISLTISAIAYLLLGYFVPN
HHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCCC
KTVFYLCSLLPLAGILCTIKHYSLINLGSQSALQQKFFLGNLFLGITFLANMIGLFLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA