| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835047
GI number: 15835047
Start: 493864
End: 495384
Strand: Direct
Name: Not Available
Synonym: TC0429
Alternate gene names: 15835047
Gene position: 493864-495384 (Clockwise)
Preceding gene: 15835046
Following gene: 15835048
Centisome position: 46.03
GC content: 41.55
Gene sequence:
>1521_bases ATGGGTGTCATGAAGTTAGAATTATTATTAGCCTTTAAGTATCTAATTCCAAGAAGAAAAAGTTTTTCCTCTTCCATAGT TTCGGTTTTTTCCGTAGGGATCGTTGCCCTTGTTGTGTGGTTGTCCGTGGTCTTTATGTCTGTGATCCACGGACTACAGC AAAGATGGGTGGGGGACCTCGCGAGGTTGCACGCTTCCATTAGAATTGAGCCCTCCGATAAATATTATGAGTCCTATTAC TATCAGATTGACTCTCATGCCGAAGCTTCGCAATACATTTATAAGACCATAGGGGAAAAGCTTCTTTCTGATCAGACAGA TCCATATGATCCAGATGTGGATTTTGCGCTTCCAGAAACATTTCCGGCTCCAGAGTTCTCTGTGAGTGGAAAGATTGTGG ATCCTGTTCATATAGCTAATGAAAAGATGCTTTCTTTTCTTCCTTCCCGGAAAGGCTCTTTTGTTGAGTTCGAAGAGGGG ATGGGGTATGTGCATATGGACAGAGCTTCTCAAAGTAGTAGGATAGAGCCTCGCTCTCTGTCTCAGTACATTGCGTATTC TTCAGAAGCCTTTTATCAGCAACGCGTTCTTCCTTTCGAAGAAACGGACTACTCAACAGAGGTTCTAAATCGCTTCAATG CTTCGTCCGAAGGTTGGTTAGCTGATTTTCTTCTTCTTCAAGAGAAATTTCGAGGTGTGTCAGTCATTCTTCCCGTCCAT TATCGAGACCTCGGTTATCGAGTTGGGGATACAGCATCGTTGTCTATCTTTTCTGTAAAAAAAGAAGGGGAGGTCCGATT CCCTTTGCGGGTAATTGGATTCTATAATCCAGGTGTTTCTCCCTTTGGGGGAAAAACAATTTTTATTGATAAAGATCTTG TTGCATCTATTCGTTCAGAATCTGAGGGACTAGGTATGCACAATGGATGGCAAGTATTTCTTCCAGATATTAAAGAGATT TCTGTTGTCAAAAGAACCCTTCAAAAATTGTTACAGGAAGCTGACGTTTCCTCATATTGGGAAGTATCTTCTTTGTATGA TTATGAGTTCTTTAAGCCTATTTTAGATCAGCTTCAAAGCGATCAGGTTTTATTTTCTATAGTTTCTTTTATTGTGTTGA TAGTGGCTTGTTCCAATATTGTGACCATGTCCATTTTGTTAGTGAATAACAAAAAACGAGAGATTGGTATTTTGAAGGCC ATGGGAGTTTCTTCCTCGCGCCTGAGATTGGTGTTTGGAGTATGTGGAGCCTGTTCAGGGATGCTGGGTGCTTTATTGGG ATCTATTTTAGCAGCATTGACATTAAAGAATTTGGGAGTTTTGACTCATTGGTTGAGCGTATTGCAGGGAAGAGAAGCTT TTAATCCGTCCTTCTTTGGCGAACAACTTCCCCAAGATTTCCACCTTCCAACGGTTATCTGCCTTTCATTAGGAGCCTTT GTTTTAGCAGCAATTTCTGGGGCTCTTCCTGCGCAGCATGTTGCACGCATGCAGGTTTCTGATATCTTAAAAGCTGAGTA G
Upstream 100 bases:
>100_bases ACAACCGGTCGACTAGAACTTAAAAAATATGATAGAAAGCTGCGTAAGCACGTTATCTTCAAAGAAGCTAAGTAGGCTTT TACCTAGCTTCTAGATCCTC
Downstream 100 bases:
>100_bases AATTATGGGAATTCTTATTGAAGCTCGTCATGTTTCGAAAACGATTAAGCAAAGAGATCTCCATATTGATATTCTGAAAG AGGTGTCTTTTCAATTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter; Lipoprotein Releasing System Transmembrane Protein; ABC Transporter Permease Protein
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MGVMKLELLLAFKYLIPRRKSFSSSIVSVFSVGIVALVVWLSVVFMSVIHGLQQRWVGDLARLHASIRIEPSDKYYESYY YQIDSHAEASQYIYKTIGEKLLSDQTDPYDPDVDFALPETFPAPEFSVSGKIVDPVHIANEKMLSFLPSRKGSFVEFEEG MGYVHMDRASQSSRIEPRSLSQYIAYSSEAFYQQRVLPFEETDYSTEVLNRFNASSEGWLADFLLLQEKFRGVSVILPVH YRDLGYRVGDTASLSIFSVKKEGEVRFPLRVIGFYNPGVSPFGGKTIFIDKDLVASIRSESEGLGMHNGWQVFLPDIKEI SVVKRTLQKLLQEADVSSYWEVSSLYDYEFFKPILDQLQSDQVLFSIVSFIVLIVACSNIVTMSILLVNNKKREIGILKA MGVSSSRLRLVFGVCGACSGMLGALLGSILAALTLKNLGVLTHWLSVLQGREAFNPSFFGEQLPQDFHLPTVICLSLGAF VLAAISGALPAQHVARMQVSDILKAE
Sequences:
>Translated_506_residues MGVMKLELLLAFKYLIPRRKSFSSSIVSVFSVGIVALVVWLSVVFMSVIHGLQQRWVGDLARLHASIRIEPSDKYYESYY YQIDSHAEASQYIYKTIGEKLLSDQTDPYDPDVDFALPETFPAPEFSVSGKIVDPVHIANEKMLSFLPSRKGSFVEFEEG MGYVHMDRASQSSRIEPRSLSQYIAYSSEAFYQQRVLPFEETDYSTEVLNRFNASSEGWLADFLLLQEKFRGVSVILPVH YRDLGYRVGDTASLSIFSVKKEGEVRFPLRVIGFYNPGVSPFGGKTIFIDKDLVASIRSESEGLGMHNGWQVFLPDIKEI SVVKRTLQKLLQEADVSSYWEVSSLYDYEFFKPILDQLQSDQVLFSIVSFIVLIVACSNIVTMSILLVNNKKREIGILKA MGVSSSRLRLVFGVCGACSGMLGALLGSILAALTLKNLGVLTHWLSVLQGREAFNPSFFGEQLPQDFHLPTVICLSLGAF VLAAISGALPAQHVARMQVSDILKAE >Mature_505_residues GVMKLELLLAFKYLIPRRKSFSSSIVSVFSVGIVALVVWLSVVFMSVIHGLQQRWVGDLARLHASIRIEPSDKYYESYYY QIDSHAEASQYIYKTIGEKLLSDQTDPYDPDVDFALPETFPAPEFSVSGKIVDPVHIANEKMLSFLPSRKGSFVEFEEGM GYVHMDRASQSSRIEPRSLSQYIAYSSEAFYQQRVLPFEETDYSTEVLNRFNASSEGWLADFLLLQEKFRGVSVILPVHY RDLGYRVGDTASLSIFSVKKEGEVRFPLRVIGFYNPGVSPFGGKTIFIDKDLVASIRSESEGLGMHNGWQVFLPDIKEIS VVKRTLQKLLQEADVSSYWEVSSLYDYEFFKPILDQLQSDQVLFSIVSFIVLIVACSNIVTMSILLVNNKKREIGILKAM GVSSSRLRLVFGVCGACSGMLGALLGSILAALTLKNLGVLTHWLSVLQGREAFNPSFFGEQLPQDFHLPTVICLSLGAFV LAAISGALPAQHVARMQVSDILKAE
Specific function: Part Of An ATP-Dependent Transport System Lolcde Responsible For The Release Of Lipoproteins Targeted To The Outer Membrane From The Inner Membrane. Such A Release Is Dependent Of The Sorting-Signal (Absence Of An Asp At Position 2 Of The Mature Lipoprot
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56553; Mature: 56422
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVMKLELLLAFKYLIPRRKSFSSSIVSVFSVGIVALVVWLSVVFMSVIHGLQQRWVGDL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLHASIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLSDQTDPYDPDVDFALPET HHHHHHEEECCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FPAPEFSVSGKIVDPVHIANEKMLSFLPSRKGSFVEFEEGMGYVHMDRASQSSRIEPRSL CCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCEEEHHCCCCEEEECCCCCCCCCCHHHH SQYIAYSSEAFYQQRVLPFEETDYSTEVLNRFNASSEGWLADFLLLQEKFRGVSVILPVH HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEE YRDLGYRVGDTASLSIFSVKKEGEVRFPLRVIGFYNPGVSPFGGKTIFIDKDLVASIRSE EHHCCCCCCCCCEEEEEEECCCCCEECCEEEEEEECCCCCCCCCEEEEECHHHHHHHHCC SEGLGMHNGWQVFLPDIKEISVVKRTLQKLLQEADVSSYWEVSSLYDYEFFKPILDQLQS CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCC DQVLFSIVSFIVLIVACSNIVTMSILLVNNKKREIGILKAMGVSSSRLRLVFGVCGACSG CHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH MLGALLGSILAALTLKNLGVLTHWLSVLQGREAFNPSFFGEQLPQDFHLPTVICLSLGAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH VLAAISGALPAQHVARMQVSDILKAE HHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GVMKLELLLAFKYLIPRRKSFSSSIVSVFSVGIVALVVWLSVVFMSVIHGLQQRWVGDL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLHASIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLSDQTDPYDPDVDFALPET HHHHHHEEECCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FPAPEFSVSGKIVDPVHIANEKMLSFLPSRKGSFVEFEEGMGYVHMDRASQSSRIEPRSL CCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCEEEHHCCCCEEEECCCCCCCCCCHHHH SQYIAYSSEAFYQQRVLPFEETDYSTEVLNRFNASSEGWLADFLLLQEKFRGVSVILPVH HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEE YRDLGYRVGDTASLSIFSVKKEGEVRFPLRVIGFYNPGVSPFGGKTIFIDKDLVASIRSE EHHCCCCCCCCCEEEEEEECCCCCEECCEEEEEEECCCCCCCCCEEEEECHHHHHHHHCC SEGLGMHNGWQVFLPDIKEISVVKRTLQKLLQEADVSSYWEVSSLYDYEFFKPILDQLQS CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCC DQVLFSIVSFIVLIVACSNIVTMSILLVNNKKREIGILKAMGVSSSRLRLVFGVCGACSG CHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH MLGALLGSILAALTLKNLGVLTHWLSVLQGREAFNPSFFGEQLPQDFHLPTVICLSLGAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH VLAAISGALPAQHVARMQVSDILKAE HHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA