| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835044
GI number: 15835044
Start: 492340
End: 493290
Strand: Reverse
Name: Not Available
Synonym: TC0426
Alternate gene names: NA
Gene position: 493290-492340 (Counterclockwise)
Preceding gene: 15835045
Following gene: 15835043
Centisome position: 45.98
GC content: 42.69
Gene sequence:
>951_bases ATGAAAAAGTTTGCTTCCTTCTTATGTTTATTATTGTCCAACAGTGGCTTTGCGGCTCCTGTTGAGGTTCCAGGGTTTCC CTCAATTCCAGAAACTTATCTCACCATCATTGAAGAGAAAACTGTGCCACAAGAACGTTGCCGCAGCGTTAATGTCCAGA GCTGCGGATATAACCTTGTAGGAGTCTTCCATACCCCAACAACTCCCATGCCTGAAGGAGGCTATCCAACCGTCATTTTT TTCCATGGATTCCGAGGAAATTGTTATGGATCTGATGGAGTTTATCGCGAACTTGCCTACCTTCTCGCTTCGAATGGAAT TGCTGTTGCTAGATTTGATATGGCAGGATGCGGAAATAGCGAGGGGATCTGCGATCAAATTCCAGCTCGGACCTATTTAC GAAATGGAGAAGACATCCTAGCAGCCGTATCTAAATACCCAGAGGTCAATGCTCATCGCATTGGTGTCGCTGGGGTTTCG TTAGGGTGTCATACTACCATACATTTAGCTAGCTCTTATAAACCTAGAGATTATACAATTCGAGCCATCTCTGTTTGGGC CCCTGTTGCAGATGGAATTATTCTTCTCAAAGAAATCTGCTCAACAATTGGCATGTCCAATCTAGCAGACTCTTCTGCAG CTGACAGCGTGGGTAAAGCATTTGGGTTCAAAAATCTTCCTATCAAACTCTGTCGAGAAGACATCGATTTTTTCTTAGGC ATTCAAGACCACGTCCTTATGCTTTCTTTACCGAAAAAAATTCCGATTCTTCATCAACATGGACTCAAAGATTGTATCGT TTCTATGTCCCACCAGCGACTATTTCTAGGAGCGGCTCCAGCACAAATGTGTTTCAAAATTTATGCTGACACACAACATG ACATAGCTTCATCTCCTTACCGACAACAAGCTTTACAAGATATTTTAATGCACTTCCAATCAAATCTTTAA
Upstream 100 bases:
>100_bases TTGCCCTATCATTCTTTCCTTTCGTTTTTTTTTCGAAACGAAAAACTGCAAAAACATGCTTCTTTTAGAAGCTTTTTGAA AATAAAGGGCTTTTTATAGA
Downstream 100 bases:
>100_bases TTTTTTCTATAAGGTTTTATATTCTCAAGATTCCTTTTAAAAGATCTCTTGCGTATACTCCTTCACTTAGCACAGACATA TTTTCGCCCTTTCCTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKKFASFLCLLLSNSGFAAPVEVPGFPSIPETYLTIIEEKTVPQERCRSVNVQSCGYNLVGVFHTPTTPMPEGGYPTVIF FHGFRGNCYGSDGVYRELAYLLASNGIAVARFDMAGCGNSEGICDQIPARTYLRNGEDILAAVSKYPEVNAHRIGVAGVS LGCHTTIHLASSYKPRDYTIRAISVWAPVADGIILLKEICSTIGMSNLADSSAADSVGKAFGFKNLPIKLCREDIDFFLG IQDHVLMLSLPKKIPILHQHGLKDCIVSMSHQRLFLGAAPAQMCFKIYADTQHDIASSPYRQQALQDILMHFQSNL
Sequences:
>Translated_316_residues MKKFASFLCLLLSNSGFAAPVEVPGFPSIPETYLTIIEEKTVPQERCRSVNVQSCGYNLVGVFHTPTTPMPEGGYPTVIF FHGFRGNCYGSDGVYRELAYLLASNGIAVARFDMAGCGNSEGICDQIPARTYLRNGEDILAAVSKYPEVNAHRIGVAGVS LGCHTTIHLASSYKPRDYTIRAISVWAPVADGIILLKEICSTIGMSNLADSSAADSVGKAFGFKNLPIKLCREDIDFFLG IQDHVLMLSLPKKIPILHQHGLKDCIVSMSHQRLFLGAAPAQMCFKIYADTQHDIASSPYRQQALQDILMHFQSNL >Mature_316_residues MKKFASFLCLLLSNSGFAAPVEVPGFPSIPETYLTIIEEKTVPQERCRSVNVQSCGYNLVGVFHTPTTPMPEGGYPTVIF FHGFRGNCYGSDGVYRELAYLLASNGIAVARFDMAGCGNSEGICDQIPARTYLRNGEDILAAVSKYPEVNAHRIGVAGVS LGCHTTIHLASSYKPRDYTIRAISVWAPVADGIILLKEICSTIGMSNLADSSAADSVGKAFGFKNLPIKLCREDIDFFLG IQDHVLMLSLPKKIPILHQHGLKDCIVSMSHQRLFLGAAPAQMCFKIYADTQHDIASSPYRQQALQDILMHFQSNL
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34554; Mature: 34554
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFASFLCLLLSNSGFAAPVEVPGFPSIPETYLTIIEEKTVPQERCRSVNVQSCGYNLV CHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEE GVFHTPTTPMPEGGYPTVIFFHGFRGNCYGSDGVYRELAYLLASNGIAVARFDMAGCGNS EEEECCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCC EGICDQIPARTYLRNGEDILAAVSKYPEVNAHRIGVAGVSLGCHTTIHLASSYKPRDYTI CCCHHHCCHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCEEE RAISVWAPVADGIILLKEICSTIGMSNLADSSAADSVGKAFGFKNLPIKLCREDIDFFLG EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC IQDHVLMLSLPKKIPILHQHGLKDCIVSMSHQRLFLGAAPAQMCFKIYADTQHDIASSPY CCCCEEEEECCCCCCHHHHCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHCCCHH RQQALQDILMHFQSNL HHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFASFLCLLLSNSGFAAPVEVPGFPSIPETYLTIIEEKTVPQERCRSVNVQSCGYNLV CHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEE GVFHTPTTPMPEGGYPTVIFFHGFRGNCYGSDGVYRELAYLLASNGIAVARFDMAGCGNS EEEECCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCC EGICDQIPARTYLRNGEDILAAVSKYPEVNAHRIGVAGVSLGCHTTIHLASSYKPRDYTI CCCHHHCCHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCEEE RAISVWAPVADGIILLKEICSTIGMSNLADSSAADSVGKAFGFKNLPIKLCREDIDFFLG EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC IQDHVLMLSLPKKIPILHQHGLKDCIVSMSHQRLFLGAAPAQMCFKIYADTQHDIASSPY CCCCEEEEECCCCCCHHHHCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHCCCHH RQQALQDILMHFQSNL HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA