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Identifier: 15835027

GI number: 15835027

Start: 469767

End: 471044

Strand: Reverse

Name: Not Available

Synonym: TC0409

Alternate gene names: NA

Gene position: 471044-469767 (Counterclockwise)

Preceding gene: 15835028

Following gene: 15835026

Centisome position: 43.9

GC content: 38.42

Gene sequence:

>1278_bases
ATGTTGCGCCCTTTGTCTTTTCTTAAAAAGCTTCACCATGCCTTTCGCAACAATTTCATTATCAAATCTTTTCTAAAAGC
TCCTAAAGTTCTTTACTACAATGAGGCCTCTAAAGAAGCCTGCATTCTAAGTTACTATGGTCTTTTTAGTTGCATTCCTA
TACTGGTCTTCTTTCTAAGACTTTCTCAATATTTGTTCATTAGCTTGGACTGGAAAGAATGGCTATTGCTCCATTACCCT
GATTACGAAACTCCTATTCTAGCTATTTTTGAAGCAGCTTATTCAACAACAAGCAGCATCGTAGTCGTTCTGGTCAGTAG
TTTTTTTGTTTTTTGTTGGGCTGGAATTCTCATGCTGCAATCTTTAGAAGATGGCCTGAATAAAATATTCTGCCCAGGAA
TCACACAAGCCTCTTTAAAAAGACTCATTAGCTACTTAATTATTACCCTTATTAGCCCCATGATCTTCATCATTGTTTGC
GGATCTTGGATCTATATCACACAAATCATGCCTATTAGTTACCCCAAGCTATTTAGTTTTAGCCATGCCATGGCCTGCAT
TTATGTGATTTCGCGAATACTACCTTATGCCCTACTTTATGGTGGCCTGTTTTGCTGCTATGCATTTCTCCCCAGAGTTC
CCACACAAAAATCCTCGTCTCTTTTGGCCGCAGCCATAGCTGGTAGTGCCTGGGTAATCTCTCAGAAAATTTTCTTTTGC
CTGCAACTCTATATTTTCAACTATAGCTTTACTTATGGAGCCCTAGTTGCTTTACCCTCCTTCCTCCTTCTTCTCTATCT
TTACTCTATTATTTATTTGTTCGGAGGAGCATTGTCCTTCCTCTTTCAAAATAAAGGATTTATCACTCTAATTCCGAAAG
AGGAGATTTTTCCTAATAGCTACTTCAAATTCATTTTATGTCTGTATTTTCTGACTCTTATTACAGAGCATTTCGATCAC
TCCCTCCCCCCTCCAAGCTCCAGTTACCTTGCTAAAAGAGCTAAAGCTTCTATTGGAGAAGCTTCCCAATGTCTAGATAT
CCTAGAAAAAGAGGGTATGATCCTAAAACACAAAGACGGTTATAAGCCCTCCCATAACATTTCTAACTTGCATATAGATG
CTATCTTTGTCCTTTTAACAAAATCTCCCTCGTTCGCGAACATCTGCTCTTCCTCTCTAATGCCTATACAAGAAAACCTT
GCTCATATACTAGCAGAGATCAAAAAGAGCTCGCATAACCTCTCTCTTTCAGAAATTGCTAAAAAAGTGAATTCATGA

Upstream 100 bases:

>100_bases
TTCAGCGATAAAAAGATCTTAGTTTTTTTGAAAAACTATAATTAAAAATCTGCTTTTTAGTTTAAAATCTTTTTAAGATC
TTTTTATATATATATTCACC

Downstream 100 bases:

>100_bases
AGCGTTCTTTGTGGTACAAAAGATTTAGCTATTATCTCCTTGTAGGATTACCGTTAGCTTTTTTTGTCCTACTTCCTAAA
TTTCTTTCCAGTGAATCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: TRNA-Processing Ribonuclease BN; Ribonuclease BN Family Protein; Inner Membrane Protein

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MLRPLSFLKKLHHAFRNNFIIKSFLKAPKVLYYNEASKEACILSYYGLFSCIPILVFFLRLSQYLFISLDWKEWLLLHYP
DYETPILAIFEAAYSTTSSIVVVLVSSFFVFCWAGILMLQSLEDGLNKIFCPGITQASLKRLISYLIITLISPMIFIIVC
GSWIYITQIMPISYPKLFSFSHAMACIYVISRILPYALLYGGLFCCYAFLPRVPTQKSSSLLAAAIAGSAWVISQKIFFC
LQLYIFNYSFTYGALVALPSFLLLLYLYSIIYLFGGALSFLFQNKGFITLIPKEEIFPNSYFKFILCLYFLTLITEHFDH
SLPPPSSSYLAKRAKASIGEASQCLDILEKEGMILKHKDGYKPSHNISNLHIDAIFVLLTKSPSFANICSSSLMPIQENL
AHILAEIKKSSHNLSLSEIAKKVNS

Sequences:

>Translated_425_residues
MLRPLSFLKKLHHAFRNNFIIKSFLKAPKVLYYNEASKEACILSYYGLFSCIPILVFFLRLSQYLFISLDWKEWLLLHYP
DYETPILAIFEAAYSTTSSIVVVLVSSFFVFCWAGILMLQSLEDGLNKIFCPGITQASLKRLISYLIITLISPMIFIIVC
GSWIYITQIMPISYPKLFSFSHAMACIYVISRILPYALLYGGLFCCYAFLPRVPTQKSSSLLAAAIAGSAWVISQKIFFC
LQLYIFNYSFTYGALVALPSFLLLLYLYSIIYLFGGALSFLFQNKGFITLIPKEEIFPNSYFKFILCLYFLTLITEHFDH
SLPPPSSSYLAKRAKASIGEASQCLDILEKEGMILKHKDGYKPSHNISNLHIDAIFVLLTKSPSFANICSSSLMPIQENL
AHILAEIKKSSHNLSLSEIAKKVNS
>Mature_425_residues
MLRPLSFLKKLHHAFRNNFIIKSFLKAPKVLYYNEASKEACILSYYGLFSCIPILVFFLRLSQYLFISLDWKEWLLLHYP
DYETPILAIFEAAYSTTSSIVVVLVSSFFVFCWAGILMLQSLEDGLNKIFCPGITQASLKRLISYLIITLISPMIFIIVC
GSWIYITQIMPISYPKLFSFSHAMACIYVISRILPYALLYGGLFCCYAFLPRVPTQKSSSLLAAAIAGSAWVISQKIFFC
LQLYIFNYSFTYGALVALPSFLLLLYLYSIIYLFGGALSFLFQNKGFITLIPKEEIFPNSYFKFILCLYFLTLITEHFDH
SLPPPSSSYLAKRAKASIGEASQCLDILEKEGMILKHKDGYKPSHNISNLHIDAIFVLLTKSPSFANICSSSLMPIQENL
AHILAEIKKSSHNLSLSEIAKKVNS

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48200; Mature: 48200

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPLSFLKKLHHAFRNNFIIKSFLKAPKVLYYNEASKEACILSYYGLFSCIPILVFFLR
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LSQYLFISLDWKEWLLLHYPDYETPILAIFEAAYSTTSSIVVVLVSSFFVFCWAGILMLQ
HHHHHEEEECHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLEDGLNKIFCPGITQASLKRLISYLIITLISPMIFIIVCGSWIYITQIMPISYPKLFSF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
SHAMACIYVISRILPYALLYGGLFCCYAFLPRVPTQKSSSLLAAAIAGSAWVISQKIFFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
LQLYIFNYSFTYGALVALPSFLLLLYLYSIIYLFGGALSFLFQNKGFITLIPKEEIFPNS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCH
YFKFILCLYFLTLITEHFDHSLPPPSSSYLAKRAKASIGEASQCLDILEKEGMILKHKDG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCC
YKPSHNISNLHIDAIFVLLTKSPSFANICSSSLMPIQENLAHILAEIKKSSHNLSLSEIA
CCCCCCCCCEEHHHEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
KKVNS
HHHCC
>Mature Secondary Structure
MLRPLSFLKKLHHAFRNNFIIKSFLKAPKVLYYNEASKEACILSYYGLFSCIPILVFFLR
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LSQYLFISLDWKEWLLLHYPDYETPILAIFEAAYSTTSSIVVVLVSSFFVFCWAGILMLQ
HHHHHEEEECHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLEDGLNKIFCPGITQASLKRLISYLIITLISPMIFIIVCGSWIYITQIMPISYPKLFSF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
SHAMACIYVISRILPYALLYGGLFCCYAFLPRVPTQKSSSLLAAAIAGSAWVISQKIFFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
LQLYIFNYSFTYGALVALPSFLLLLYLYSIIYLFGGALSFLFQNKGFITLIPKEEIFPNS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCH
YFKFILCLYFLTLITEHFDHSLPPPSSSYLAKRAKASIGEASQCLDILEKEGMILKHKDG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCC
YKPSHNISNLHIDAIFVLLTKSPSFANICSSSLMPIQENLAHILAEIKKSSHNLSLSEIA
CCCCCCCCCEEHHHEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
KKVNS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA