| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835013
GI number: 15835013
Start: 456967
End: 457467
Strand: Direct
Name: Not Available
Synonym: TC0394
Alternate gene names: 15835013
Gene position: 456967-457467 (Clockwise)
Preceding gene: 15835012
Following gene: 15835014
Centisome position: 42.59
GC content: 42.71
Gene sequence:
>501_bases ATGGATGGGAGAATGGTCTGTTGCGGAAAAATTTTGTTAGGAGAACAACAAACGCTGCCTACTGTAGAGAGGAGCCCTTC GTCAATTTGTGCGATAACGGTTAAGAAGACCGCTCTATTAGCTGTTTCTTTATTTGCTGTGCTCACAGCAGGGAGTTTGG CTGTATTGTCGGGGCTTGTGTTGTTTAGTGGAACTGCGTCATTCCTACCATATTTGCTGATATTTGCTGCGGCTTTGTTT GGCTTTGTTTGTGCTTCTATAGTGTTGGTGAAATGTATTTCATCGGTTGTTCAAGATGTTAAAAAGAAAGAGAAAGCTCC AGAATCCATTCCGATGAGCGATCTTAGCTCCTCTTCTAGTTCTTCTGAATTGGAGAAACTTGTTGATTCAAGTTCCAGCC TTGGTAGTATTTTATGTTCTATAGGAGACTGTGTTGATGAAGCATTTGGGTCTCGGAACAATGAGCTGCGGGCTATGCGG GCTAGAGCAAATAGCTGTTAA
Upstream 100 bases:
>100_bases CTAGCAAGTTTTTTATGTGCTGCTCGTGTTTTGTTCTTAATTACTAAAGATCGAGGGTGGGTGTAATCGTCTGCCTAATA AACGGAAAAATATTTGATAA
Downstream 100 bases:
>100_bases TGAAAGAAGGGGAGGGGAGCCTCTTCTTTTTTATCATTTTAGGAGCATTTTGATTTGTCCCTGTAATAAGGTTATCTTGT CGCAGGGATTTTTCTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDGRMVCCGKILLGEQQTLPTVERSPSSICAITVKKTALLAVSLFAVLTAGSLAVLSGLVLFSGTASFLPYLLIFAAALF GFVCASIVLVKCISSVVQDVKKKEKAPESIPMSDLSSSSSSSELEKLVDSSSSLGSILCSIGDCVDEAFGSRNNELRAMR ARANSC
Sequences:
>Translated_166_residues MDGRMVCCGKILLGEQQTLPTVERSPSSICAITVKKTALLAVSLFAVLTAGSLAVLSGLVLFSGTASFLPYLLIFAAALF GFVCASIVLVKCISSVVQDVKKKEKAPESIPMSDLSSSSSSSELEKLVDSSSSLGSILCSIGDCVDEAFGSRNNELRAMR ARANSC >Mature_166_residues MDGRMVCCGKILLGEQQTLPTVERSPSSICAITVKKTALLAVSLFAVLTAGSLAVLSGLVLFSGTASFLPYLLIFAAALF GFVCASIVLVKCISSVVQDVKKKEKAPESIPMSDLSSSSSSSELEKLVDSSSSLGSILCSIGDCVDEAFGSRNNELRAMR ARANSC
Specific function: Inclusion membrane protein probably involved in early modification events of the chlamydial inclusion. Binds to the host cell 14-3-3 beta. The binding is associated with phosphorylation of Ser-166. The function of this interaction in chlamydiae remains un
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Host cell membrane; Multi-pass membrane protein (Potential). Note=Secreted, probably via type III secretion system. Localized to the inclusion membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17335; Mature: 17335
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGRMVCCGKILLGEQQTLPTVERSPSSICAITVKKTALLAVSLFAVLTAGSLAVLSGLV CCCCEEEHHHHHHCCCCCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LFSGTASFLPYLLIFAAALFGFVCASIVLVKCISSVVQDVKKKEKAPESIPMSDLSSSSS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC SSELEKLVDSSSSLGSILCSIGDCVDEAFGSRNNELRAMRARANSC HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MDGRMVCCGKILLGEQQTLPTVERSPSSICAITVKKTALLAVSLFAVLTAGSLAVLSGLV CCCCEEEHHHHHHCCCCCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LFSGTASFLPYLLIFAAALFGFVCASIVLVKCISSVVQDVKKKEKAPESIPMSDLSSSSS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC SSELEKLVDSSSSLGSILCSIGDCVDEAFGSRNNELRAMRARANSC HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10447885; 9784136; 11260479; 14500499 [H]