| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834859
GI number: 15834859
Start: 278188
End: 279402
Strand: Direct
Name: Not Available
Synonym: TC0239
Alternate gene names: NA
Gene position: 278188-279402 (Clockwise)
Preceding gene: 15834858
Following gene: 15834864
Centisome position: 25.93
GC content: 39.67
Gene sequence:
>1215_bases ATGGGATTCGGCACTGTACGAGGAAAAGGAAAAGCTTTGAAATCCTTATTCCTAAGGCCTCTACAGAGTCTTGAAGTGGG CCTTTTATCATTACCTATAGTTCTATTGTTGGGTGAGGTTGGTTGTTTATCTCTGATCTCCTCGGTTCCTTTAGTAGTCG TTTTGGGTGTTATCGGTGTCTCCGTCGCCTTAGTTTCTTTTTTCCGTAATTGGGGCTATGGGATAGCCATTTTAGGGGCT ATATTTTTGGGGATATCACTCTATAATCATTCCTCTATATCCATTTTTTGGGGAAGTTTACTAGTCTTTTCGTTCGTTGT TTCTCTTGGAGTATTTTTACTGAGCGTTTCCTTGGTTGAAGGCCTTATTAGAGAGAAAACAGCATCCTTAAAAAAAGTAT CCATTTGTCGTGATGAACTTCAAGAATCATATAATCGAGAAGTGCAAGAGAGAAAAGATGGAGAGCTTTTTTTCCAGGGA CAAGTAGCTGCTTTGGAACGGGAGCTTTCAGTCTGTTCTGATCAGCTTCAAGAGGTTTCTAGGAAATATACGCATGCGCA TGAGGATTTGCAAGTTCTTATAGACCAAAGGGATGGTTGGTTAAAGGACTACATGACGTTGCATCAAGAGTACGTTCGGG CTATTTCAGGGTATGAAGAACAAACCCTTTTCCCTTGGAGGGTTTTCCAAGGACATTCTCAAGAGAGTGTGGATGATTCA CAGCAAATACAAGTTTGTGAAAAACTTGCTGATTTAGAGAAGCTATGTGAAGAAGAAAGCGGTAGCAAGCGTTATGCTGA AGAGCGTTTAGAAAAGGTTTTATCAGATCTACTAGAAGCAACTCATCATCGAGAGAGTTTAGAAAAAGAGGTTGTCGAGA AAGATAAAGAGATCGAAGCTCTAAAACAAGAGATTTCGATGGAAAAACTCCAGAATTCTTCTGCTCATCATGAAAGGGCT GTTTATAAAGGTAAGTACTTGCAGTTGAGAGAACAATTCCAGGTGAAAGATGCCTTTCTTAAGAAAGCTAGACGCGAACG ATTTTTAGCTCAGGAACAGCTATTGGCTTTGAAACGGGAAGAGGAAGAAGAAGCCTCAGATCCGTCCACGATGGATAGTT TTTTTATTATTCAAAACCTTTTATTACAGATTGAGGCGCTAGAAGAAGAAATCAATTATCTAGAAGAGTTAGTATTTCAT AACCAGAATCTGTGA
Upstream 100 bases:
>100_bases CGTCGAGATGGTTTATGAAGGAGATCGAGAGTTGGTTAGATTTTTGTTAACCAAAGCGTTAGCTTCTTTAGATCAGCCCT AAACAAAAAAGAGGGTTCTA
Downstream 100 bases:
>100_bases TAAGCACTGTGTGCTCCCACTGTGCGCTAGGCTGGTGGTCACAGGTTCTTGCTTCCCAGTGGTTCGTGGGGTCAATGAAT CCCTCCTTCTTCCCTACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MGFGTVRGKGKALKSLFLRPLQSLEVGLLSLPIVLLLGEVGCLSLISSVPLVVVLGVIGVSVALVSFFRNWGYGIAILGA IFLGISLYNHSSISIFWGSLLVFSFVVSLGVFLLSVSLVEGLIREKTASLKKVSICRDELQESYNREVQERKDGELFFQG QVAALERELSVCSDQLQEVSRKYTHAHEDLQVLIDQRDGWLKDYMTLHQEYVRAISGYEEQTLFPWRVFQGHSQESVDDS QQIQVCEKLADLEKLCEEESGSKRYAEERLEKVLSDLLEATHHRESLEKEVVEKDKEIEALKQEISMEKLQNSSAHHERA VYKGKYLQLREQFQVKDAFLKKARRERFLAQEQLLALKREEEEEASDPSTMDSFFIIQNLLLQIEALEEEINYLEELVFH NQNL
Sequences:
>Translated_404_residues MGFGTVRGKGKALKSLFLRPLQSLEVGLLSLPIVLLLGEVGCLSLISSVPLVVVLGVIGVSVALVSFFRNWGYGIAILGA IFLGISLYNHSSISIFWGSLLVFSFVVSLGVFLLSVSLVEGLIREKTASLKKVSICRDELQESYNREVQERKDGELFFQG QVAALERELSVCSDQLQEVSRKYTHAHEDLQVLIDQRDGWLKDYMTLHQEYVRAISGYEEQTLFPWRVFQGHSQESVDDS QQIQVCEKLADLEKLCEEESGSKRYAEERLEKVLSDLLEATHHRESLEKEVVEKDKEIEALKQEISMEKLQNSSAHHERA VYKGKYLQLREQFQVKDAFLKKARRERFLAQEQLLALKREEEEEASDPSTMDSFFIIQNLLLQIEALEEEINYLEELVFH NQNL >Mature_403_residues GFGTVRGKGKALKSLFLRPLQSLEVGLLSLPIVLLLGEVGCLSLISSVPLVVVLGVIGVSVALVSFFRNWGYGIAILGAI FLGISLYNHSSISIFWGSLLVFSFVVSLGVFLLSVSLVEGLIREKTASLKKVSICRDELQESYNREVQERKDGELFFQGQ VAALERELSVCSDQLQEVSRKYTHAHEDLQVLIDQRDGWLKDYMTLHQEYVRAISGYEEQTLFPWRVFQGHSQESVDDSQ QIQVCEKLADLEKLCEEESGSKRYAEERLEKVLSDLLEATHHRESLEKEVVEKDKEIEALKQEISMEKLQNSSAHHERAV YKGKYLQLREQFQVKDAFLKKARRERFLAQEQLLALKREEEEEASDPSTMDSFFIIQNLLLQIEALEEEINYLEELVFHN QNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46176; Mature: 46045
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGTVRGKGKALKSLFLRPLQSLEVGLLSLPIVLLLGEVGCLSLISSVPLVVVLGVIGV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVALVSFFRNWGYGIAILGAIFLGISLYNHSSISIFWGSLLVFSFVVSLGVFLLSVSLVE HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIREKTASLKKVSICRDELQESYNREVQERKDGELFFQGQVAALERELSVCSDQLQEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHH RKYTHAHEDLQVLIDQRDGWLKDYMTLHQEYVRAISGYEEQTLFPWRVFQGHSQESVDDS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHH QQIQVCEKLADLEKLCEEESGSKRYAEERLEKVLSDLLEATHHRESLEKEVVEKDKEIEA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQEISMEKLQNSSAHHERAVYKGKYLQLREQFQVKDAFLKKARRERFLAQEQLLALKRE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEEEASDPSTMDSFFIIQNLLLQIEALEEEINYLEELVFHNQNL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GFGTVRGKGKALKSLFLRPLQSLEVGLLSLPIVLLLGEVGCLSLISSVPLVVVLGVIGV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVALVSFFRNWGYGIAILGAIFLGISLYNHSSISIFWGSLLVFSFVVSLGVFLLSVSLVE HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIREKTASLKKVSICRDELQESYNREVQERKDGELFFQGQVAALERELSVCSDQLQEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHH RKYTHAHEDLQVLIDQRDGWLKDYMTLHQEYVRAISGYEEQTLFPWRVFQGHSQESVDDS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHH QQIQVCEKLADLEKLCEEESGSKRYAEERLEKVLSDLLEATHHRESLEKEVVEKDKEIEA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQEISMEKLQNSSAHHERAVYKGKYLQLREQFQVKDAFLKKARRERFLAQEQLLALKRE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEEEASDPSTMDSFFIIQNLLLQIEALEEEINYLEELVFHNQNL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA