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Identifier: 15834719

GI number: 15834719

Start: 112525

End: 113679

Strand: Reverse

Name: Not Available

Synonym: TC0094

Alternate gene names: 15834719

Gene position: 113679-112525 (Counterclockwise)

Preceding gene: 15834720

Following gene: 15834718

Centisome position: 10.59

GC content: 43.9

Gene sequence:

>1155_bases
ATGGACGGAACAAAAATTCACGAAGAGCGCACTTTCGTTTGGTTAAATAATCAACAAACCATCCCGCCTTCTGAGATGGT
TAAGGAAGCTTTTCAGCGTTATGCAAATGTGTTCTCCTGCGAAGTTAATACTTCTGCTCTTGCTTTACAGGCAGAAGCAG
AAGTTTCTGCTCGCAAGCTAACTGGATGTCAAGAAAAAGACTTTACCTTTCATTTTGTTCCCTATTACCCCCATATAGCA
GCCATAATTGTGGCTGCCCTTCTTGAAAACCAACATGCCTTCCAAGGAAGGAATCACCTCCTGATTCCTTCTTGTGAACA
ACAATGGATCATAAATGCTCTCTGTCGCCGGCAAAATTTAGGAACAACATATGATTGGGTAACAAGCAAAACAGGGTGCG
TAAAAGAAACAGATTTAGCAGAAGCAGTCTCCCCTCGCACCCTACTGTTCTCGATATCAGCTGCTAATGGCATGACAGGC
CTACTCGAAGCCATCCCAGAGCTCGTTACCTTATGTAAAGAACGAAGCATCATTCTCCATGTGGACATTAGCGATATTCT
TGGCAGATGCGCTCTCCCTACAGAGCTTTATCAGACGGATATTCTTACCTTCTCATCACAATCCCTTGGAGGCATTGGCT
CTTCAGGAGCTATGTTTATGAAGCCCTCTTTAACAAAATATTTTTCTTTATGGCTTCCAGAGACCCCTCCAATCCCAACT
TGTCTAAGCTCTCTTGCAGCTTTTTCTCTAGCTTGCCAAGAACGTGCGGCTTCTTTCCCTTCCTTAGTCCTTTCCGCAAT
TTCTGCTCGATCAGCTCTTAAACAAGCTTTAACTGCTATTCCTCAAGTGCAATTCCTTTTAGAAGACATCGACTCTCGCC
TGCCAAATGTCGCTGTCTTTGCTATTCCCGGCATTCCTGCAGAATCTTTAGGTTTTTTTCTTTCCCAGAAAAACATTTTT
GTAGGACTGGGGTACGAACGATTCCAACCTTTATCCCAAATCCTACAAAGCTCTGGAATTTCACCCTTCTTTTGTCATAG
CGCCCTGCATGTGTCTTTTACAGAACGTACTCCCGCTACACACTTCTCTGCTTTAGCCTCAGCCTTACAAGAAGGCATCT
CGCATTTACAACCTCTCATCACCAAATCCCTATGA

Upstream 100 bases:

>100_bases
ATGGGAACTCTTTACGCTCTTTGATCATGGACCTAGAAAAATTAACTGAAGAAGAAGTACTCTCTTTAGAGTTGCCAACA
GGGAAACCTATTGTATACGA

Downstream 100 bases:

>100_bases
TCATTCCATTTTATCCTTTCTCTTTATGGAGCAGCTTCCCCGCAAAATCATTGCGCTTATTCTTTCAGCCTAAACACGGG
GGACTCTTATCTCAGGAGCA

Product: nifS protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MDGTKIHEERTFVWLNNQQTIPPSEMVKEAFQRYANVFSCEVNTSALALQAEAEVSARKLTGCQEKDFTFHFVPYYPHIA
AIIVAALLENQHAFQGRNHLLIPSCEQQWIINALCRRQNLGTTYDWVTSKTGCVKETDLAEAVSPRTLLFSISAANGMTG
LLEAIPELVTLCKERSIILHVDISDILGRCALPTELYQTDILTFSSQSLGGIGSSGAMFMKPSLTKYFSLWLPETPPIPT
CLSSLAAFSLACQERAASFPSLVLSAISARSALKQALTAIPQVQFLLEDIDSRLPNVAVFAIPGIPAESLGFFLSQKNIF
VGLGYERFQPLSQILQSSGISPFFCHSALHVSFTERTPATHFSALASALQEGISHLQPLITKSL

Sequences:

>Translated_384_residues
MDGTKIHEERTFVWLNNQQTIPPSEMVKEAFQRYANVFSCEVNTSALALQAEAEVSARKLTGCQEKDFTFHFVPYYPHIA
AIIVAALLENQHAFQGRNHLLIPSCEQQWIINALCRRQNLGTTYDWVTSKTGCVKETDLAEAVSPRTLLFSISAANGMTG
LLEAIPELVTLCKERSIILHVDISDILGRCALPTELYQTDILTFSSQSLGGIGSSGAMFMKPSLTKYFSLWLPETPPIPT
CLSSLAAFSLACQERAASFPSLVLSAISARSALKQALTAIPQVQFLLEDIDSRLPNVAVFAIPGIPAESLGFFLSQKNIF
VGLGYERFQPLSQILQSSGISPFFCHSALHVSFTERTPATHFSALASALQEGISHLQPLITKSL
>Mature_384_residues
MDGTKIHEERTFVWLNNQQTIPPSEMVKEAFQRYANVFSCEVNTSALALQAEAEVSARKLTGCQEKDFTFHFVPYYPHIA
AIIVAALLENQHAFQGRNHLLIPSCEQQWIINALCRRQNLGTTYDWVTSKTGCVKETDLAEAVSPRTLLFSISAANGMTG
LLEAIPELVTLCKERSIILHVDISDILGRCALPTELYQTDILTFSSQSLGGIGSSGAMFMKPSLTKYFSLWLPETPPIPT
CLSSLAAFSLACQERAASFPSLVLSAISARSALKQALTAIPQVQFLLEDIDSRLPNVAVFAIPGIPAESLGFFLSQKNIF
VGLGYERFQPLSQILQSSGISPFFCHSALHVSFTERTPATHFSALASALQEGISHLQPLITKSL

Specific function: Catalyzes the removal of elemental sulfur from cysteine to produce alanine [H]

COG id: COG1104

COG function: function code E; Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily [H]

Homologues:

Organism=Escherichia coli, GI48994898, Length=301, Percent_Identity=22.9235880398671, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR010240
- InterPro:   IPR017773
- InterPro:   IPR016454
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.8.1.7 [H]

Molecular weight: Translated: 42100; Mature: 42100

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTKIHEERTFVWLNNQQTIPPSEMVKEAFQRYANVFSCEVNTSALALQAEAEVSARKL
CCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEHHHHHHHHH
TGCQEKDFTFHFVPYYPHIAAIIVAALLENQHAFQGRNHLLIPSCEQQWIINALCRRQNL
CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHCCCCEEECCCCHHHHHHHHHHHHCCC
GTTYDWVTSKTGCVKETDLAEAVSPRTLLFSISAANGMTGLLEAIPELVTLCKERSIILH
CCCCHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE
VDISDILGRCALPTELYQTDILTFSSQSLGGIGSSGAMFMKPSLTKYFSLWLPETPPIPT
EEHHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCHHH
CLSSLAAFSLACQERAASFPSLVLSAISARSALKQALTAIPQVQFLLEDIDSRLPNVAVF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
AIPGIPAESLGFFLSQKNIFVGLGYERFQPLSQILQSSGISPFFCHSALHVSFTERTPAT
EECCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCCHH
HFSALASALQEGISHLQPLITKSL
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGTKIHEERTFVWLNNQQTIPPSEMVKEAFQRYANVFSCEVNTSALALQAEAEVSARKL
CCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEHHHHHHHHH
TGCQEKDFTFHFVPYYPHIAAIIVAALLENQHAFQGRNHLLIPSCEQQWIINALCRRQNL
CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHCCCCEEECCCCHHHHHHHHHHHHCCC
GTTYDWVTSKTGCVKETDLAEAVSPRTLLFSISAANGMTGLLEAIPELVTLCKERSIILH
CCCCHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE
VDISDILGRCALPTELYQTDILTFSSQSLGGIGSSGAMFMKPSLTKYFSLWLPETPPIPT
EEHHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCHHH
CLSSLAAFSLACQERAASFPSLVLSAISARSALKQALTAIPQVQFLLEDIDSRLPNVAVF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
AIPGIPAESLGFFLSQKNIFVGLGYERFQPLSQILQSSGISPFFCHSALHVSFTERTPAT
EECCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCCHH
HFSALASALQEGISHLQPLITKSL
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA