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Identifier: 15834680

GI number: 15834680

Start: 63705

End: 64712

Strand: Direct

Name: Not Available

Synonym: TC0055

Alternate gene names: NA

Gene position: 63705-64712 (Clockwise)

Preceding gene: 15834679

Following gene: 15834681

Centisome position: 5.94

GC content: 39.38

Gene sequence:

>1008_bases
ATGGAAGAAGCGGAAAAGCATTTAGCGAAAGAGTTTTTGTGTTCAGGAATTAATTTATTTTTGAGTGGTGAATACGAACA
AGCTGAAGAAAGGTTGAAAGAGTCTTTAGAATTAGATCCAGAAGCTGGGTTAGCCTATTGTTATTTGGGAATTATTGCTT
TAGAAACAGGACGGACTGCTGAAGCTTTGGTTTGGTGTAAGAAGGGATTGGATGAGGAGCCAGGAGACAGCTATTTACGT
TATTGTTATGGTGTTGCCTTAGATAAAGCAGATCGTGTAGAGGAAGCCATTGGCCATTATCAGGCATATGCAGAGCTTCA
TCCTGAGGACATAGAATGCCTTTTTAGTTTAGGAAGCGCCTATCATCGTGTGTTACGTTATGAAGATGCCATTGCTTGCT
TTGATCGTATTGCACAACTCGATCCTTGGAATCCTCAAAGTTTATATAATAAGGCTGTGATTTTATCAGATATGGAAGAT
GAAGAGGGGGCGATTGATTTATTGGAATCAACTGTGAAGAGAAACCCTCTTTATTGGAAAGCTTGGGTAAAATTGGGGTA
CTTACTTTCCAGAAATAAGATGTGGGATCGAGCAACGGAAGCTTATGAGCGAGTTGTTCAATTACGACCCGATCTATCTG
ATGGGCATTATAACCTGGGACTATGCTATTTAACGCTTGATAAAACAAGATTGGCGTTAAAAGCTTTTCAAGAGTCTTTG
CAATTGAATTCTGAAGATGCAGATGCACATTTTTATATAGGGTTGGCGCATATGGATCTTAAGCAGAATGAGCTGGCTTA
TGATGCATTTTATCGGGCATTGGGAATTAATTTAGATCACGAACGATCGCACTATTTATTGGGCTATTTGCACCATATAC
AAGGAGAATCTGACAAAGCAGAGAAGGAGCTTTCTTTCTTAATGTCTAAGGAATCGGTGTTCGCTCCATTGTTGCAAAAA
ACTGTGAGTAGTTCAGGATTTATTCGTGAGAAAGAGACGCTATTTTGA

Upstream 100 bases:

>100_bases
GAGAAATGGGAAGAAATTCGTAAAAAATCTCTCCATTAATGGAGATTGGCACGCTTTTTGCTCCTGTAGAAGTGAGGTGT
TACTTTGACAGGGAACGACT

Downstream 100 bases:

>100_bases
AAGTAGCCAACTTTTAATGATGGTGATTTTCTTCTCAACAAAACGACTTGGTTTTTGAATTTTTATTTGTTTGTGTTGTA
GAAAAATTCCATTTTTTTTA

Product: type III secretion chaperone, putative

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat-Containing Protein; Sulfotransferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-Linked GlcNAc Transferase; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Serine/Threonine Protein Kinase With TPR Repeats; TPR Domain Protein; Methyltransferase Type; SPY Protein; Peptidase S1 And S6 Chymotrypsin/Hap; TPR Repeat Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Sel1 Repeat Family; Protein Prenyltransferase Subunit Alpha; TPR Domain Containing Protein; TPR Repeat-Containing Methyltransferase; Peptidase; Tpr Repeat Protein; Peptidase S; TPR-Motif-Containing Protein; Methyltransferase; Serine/Threonine Protein Kinase; Protein Kinase; TPR -Repeat Containing Protein

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MEEAEKHLAKEFLCSGINLFLSGEYEQAEERLKESLELDPEAGLAYCYLGIIALETGRTAEALVWCKKGLDEEPGDSYLR
YCYGVALDKADRVEEAIGHYQAYAELHPEDIECLFSLGSAYHRVLRYEDAIACFDRIAQLDPWNPQSLYNKAVILSDMED
EEGAIDLLESTVKRNPLYWKAWVKLGYLLSRNKMWDRATEAYERVVQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQESL
QLNSEDADAHFYIGLAHMDLKQNELAYDAFYRALGINLDHERSHYLLGYLHHIQGESDKAEKELSFLMSKESVFAPLLQK
TVSSSGFIREKETLF

Sequences:

>Translated_335_residues
MEEAEKHLAKEFLCSGINLFLSGEYEQAEERLKESLELDPEAGLAYCYLGIIALETGRTAEALVWCKKGLDEEPGDSYLR
YCYGVALDKADRVEEAIGHYQAYAELHPEDIECLFSLGSAYHRVLRYEDAIACFDRIAQLDPWNPQSLYNKAVILSDMED
EEGAIDLLESTVKRNPLYWKAWVKLGYLLSRNKMWDRATEAYERVVQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQESL
QLNSEDADAHFYIGLAHMDLKQNELAYDAFYRALGINLDHERSHYLLGYLHHIQGESDKAEKELSFLMSKESVFAPLLQK
TVSSSGFIREKETLF
>Mature_335_residues
MEEAEKHLAKEFLCSGINLFLSGEYEQAEERLKESLELDPEAGLAYCYLGIIALETGRTAEALVWCKKGLDEEPGDSYLR
YCYGVALDKADRVEEAIGHYQAYAELHPEDIECLFSLGSAYHRVLRYEDAIACFDRIAQLDPWNPQSLYNKAVILSDMED
EEGAIDLLESTVKRNPLYWKAWVKLGYLLSRNKMWDRATEAYERVVQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQESL
QLNSEDADAHFYIGLAHMDLKQNELAYDAFYRALGINLDHERSHYLLGYLHHIQGESDKAEKELSFLMSKESVFAPLLQK
TVSSSGFIREKETLF

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83415184, Length=210, Percent_Identity=27.1428571428571, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI301336134, Length=210, Percent_Identity=27.1428571428571, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI32307150, Length=315, Percent_Identity=26.031746031746, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI32307148, Length=315, Percent_Identity=26.031746031746, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=294, Percent_Identity=24.8299319727891, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647755, Length=315, Percent_Identity=26.3492063492064, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585827, Length=315, Percent_Identity=26.3492063492064, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585829, Length=315, Percent_Identity=26.3492063492064, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38426; Mature: 38426

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEAEKHLAKEFLCSGINLFLSGEYEQAEERLKESLELDPEAGLAYCYLGIIALETGRTA
CCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCH
EALVWCKKGLDEEPGDSYLRYCYGVALDKADRVEEAIGHYQAYAELHPEDIECLFSLGSA
HHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YHRVLRYEDAIACFDRIAQLDPWNPQSLYNKAVILSDMEDEEGAIDLLESTVKRNPLYWK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCHHH
AWVKLGYLLSRNKMWDRATEAYERVVQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQESL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHH
QLNSEDADAHFYIGLAHMDLKQNELAYDAFYRALGINLDHERSHYLLGYLHHIQGESDKA
HCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHH
EKELSFLMSKESVFAPLLQKTVSSSGFIREKETLF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MEEAEKHLAKEFLCSGINLFLSGEYEQAEERLKESLELDPEAGLAYCYLGIIALETGRTA
CCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCH
EALVWCKKGLDEEPGDSYLRYCYGVALDKADRVEEAIGHYQAYAELHPEDIECLFSLGSA
HHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YHRVLRYEDAIACFDRIAQLDPWNPQSLYNKAVILSDMEDEEGAIDLLESTVKRNPLYWK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCHHH
AWVKLGYLLSRNKMWDRATEAYERVVQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQESL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHH
QLNSEDADAHFYIGLAHMDLKQNELAYDAFYRALGINLDHERSHYLLGYLHHIQGESDKA
HCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHH
EKELSFLMSKESVFAPLLQKTVSSSGFIREKETLF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA