| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834667
GI number: 15834667
Start: 46704
End: 47555
Strand: Direct
Name: Not Available
Synonym: TC0042
Alternate gene names: NA
Gene position: 46704-47555 (Clockwise)
Preceding gene: 15834666
Following gene: 15834668
Centisome position: 4.35
GC content: 39.55
Gene sequence:
>852_bases ATGGAAGTAAATAAAACGACAGAATCTTTGTTTAGTGCAAAGGTTGAGCATAATCATGCACAGGCAGAATCTCATGAGCC AAGAGATCAAAGAGATGTTAAGGTATTTTCTTTAGGAGGAAAATCTTCCTCTAAACAAGAAAAATTAGACCATGGATCAG GAAGAACCTCTTCGCGTCATGAAACTTCAAGAAGTTCTAAGGAAGGTAGTATTGAAGATAAGTCTGCAGAAGTTTCTTCT CGAGAAGAAGAGGAGGAAAACAGAGATGGATTCTTGTCTGGAGGTAATTTAACTGCAGGAGTAGCTTTTACTGATACACC TATGGCTGTAGCTAGCGAAGTGATGATAGAGACCAATGCTGTGACCATGAGTCAAATTGATTTGCAATGGGTAGAACAGC TTGTTTTATCTACAGTAGAATCCTTGTTAGTTGCTGATGTAGATGGAAAGCAATTAGTAGAGATTGTTTTAGATAATAAT AGTACAGTGCCAGAGGCTTTCTGCGGAGCTAATTTAACCCTAGTGCAAACAGGGGAGGATGTGGCTGTTACTTTCTCAAA TTTCGTAGATCAGGATCAGGTTGCAGAAGCTATGCAACTGGTTCAACAGAATCCCGAGCAATTAACTTCTTTAGTTGAGT CTTTGAAGTCTCGTCAGTTAAATTTAACAGAGTTAGTTGTAGGTAACGTAGCCGTTAGCCTACCTGTTCTTGAAAAAGTA GAAACTCCATTACACATGATTGCAGCGACTATTCGTCATCATGATCAGGAAGGAGACCAAGAAGGTGAAGGACGTCAAGA ACAACATCAAGGTCGCCAGCAAGAGAAGAAATTAGAAGAAGCTCAGATATAA
Upstream 100 bases:
>100_bases AGAGGAAGCTCGCCAGGAAGAAAAAGAGCAAGATGAAATGGGGCAATTGCTTCATCAGTTACGTAAGCAAAAACAACGGG AATCTGGGGGGAACTAATTT
Downstream 100 bases:
>100_bases GGTATTCCCATGGCAGTTGCAGCAGAGCCTAGTAGTAATTGGTTGAAAGCTAGAGACGAGTTACTAAGTTCTTTGCAAAA ACAGGACGAAGGGAGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MEVNKTTESLFSAKVEHNHAQAESHEPRDQRDVKVFSLGGKSSSKQEKLDHGSGRTSSRHETSRSSKEGSIEDKSAEVSS REEEEENRDGFLSGGNLTAGVAFTDTPMAVASEVMIETNAVTMSQIDLQWVEQLVLSTVESLLVADVDGKQLVEIVLDNN STVPEAFCGANLTLVQTGEDVAVTFSNFVDQDQVAEAMQLVQQNPEQLTSLVESLKSRQLNLTELVVGNVAVSLPVLEKV ETPLHMIAATIRHHDQEGDQEGEGRQEQHQGRQQEKKLEEAQI
Sequences:
>Translated_283_residues MEVNKTTESLFSAKVEHNHAQAESHEPRDQRDVKVFSLGGKSSSKQEKLDHGSGRTSSRHETSRSSKEGSIEDKSAEVSS REEEEENRDGFLSGGNLTAGVAFTDTPMAVASEVMIETNAVTMSQIDLQWVEQLVLSTVESLLVADVDGKQLVEIVLDNN STVPEAFCGANLTLVQTGEDVAVTFSNFVDQDQVAEAMQLVQQNPEQLTSLVESLKSRQLNLTELVVGNVAVSLPVLEKV ETPLHMIAATIRHHDQEGDQEGEGRQEQHQGRQQEKKLEEAQI >Mature_283_residues MEVNKTTESLFSAKVEHNHAQAESHEPRDQRDVKVFSLGGKSSSKQEKLDHGSGRTSSRHETSRSSKEGSIEDKSAEVSS REEEEENRDGFLSGGNLTAGVAFTDTPMAVASEVMIETNAVTMSQIDLQWVEQLVLSTVESLLVADVDGKQLVEIVLDNN STVPEAFCGANLTLVQTGEDVAVTFSNFVDQDQVAEAMQLVQQNPEQLTSLVESLKSRQLNLTELVVGNVAVSLPVLEKV ETPLHMIAATIRHHDQEGDQEGEGRQEQHQGRQQEKKLEEAQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0705/CT_671/TC_0042 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y042_CHLMU (Q9PLQ3)
Other databases:
- EMBL: AE002160 - PIR: F81749 - RefSeq: NP_296426.1 - GeneID: 1245567 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0042 - TIGR: TC_0042 - HOGENOM: HBG413967 - OMA: QTPLHMI - ProtClustDB: CLSK871528 - BioCyc: CMUR243161:TC_0042-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31062; Mature: 31062
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVNKTTESLFSAKVEHNHAQAESHEPRDQRDVKVFSLGGKSSSKQEKLDHGSGRTSSRH CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHH ETSRSSKEGSIEDKSAEVSSREEEEENRDGFLSGGNLTAGVAFTDTPMAVASEVMIETNA HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHCCCC VTMSQIDLQWVEQLVLSTVESLLVADVDGKQLVEIVLDNNSTVPEAFCGANLTLVQTGED EEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHHCCCEEEEECCCC VAVTFSNFVDQDQVAEAMQLVQQNPEQLTSLVESLKSRQLNLTELVVGNVAVSLPVLEKV EEEHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ETPLHMIAATIRHHDQEGDQEGEGRQEQHQGRQQEKKLEEAQI HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVNKTTESLFSAKVEHNHAQAESHEPRDQRDVKVFSLGGKSSSKQEKLDHGSGRTSSRH CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHH ETSRSSKEGSIEDKSAEVSSREEEEENRDGFLSGGNLTAGVAFTDTPMAVASEVMIETNA HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHCCCC VTMSQIDLQWVEQLVLSTVESLLVADVDGKQLVEIVLDNNSTVPEAFCGANLTLVQTGED EEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHHCCCEEEEECCCC VAVTFSNFVDQDQVAEAMQLVQQNPEQLTSLVESLKSRQLNLTELVVGNVAVSLPVLEKV EEEHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ETPLHMIAATIRHHDQEGDQEGEGRQEQHQGRQQEKKLEEAQI HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935