Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158338993

Identifier: 158338993

GI number: 158338993

Start: 5978720

End: 5979112

Strand: Direct

Name: 158338993

Synonym: AM1_5912

Alternate gene names: NA

Gene position: 5978720-5979112 (Clockwise)

Preceding gene: 158338992

Following gene: 158338996

Centisome position: 91.93

GC content: 50.89

Gene sequence:

>393_bases
ATGGGACAACAAGTCGTCATGGGGGCGTCCTTACAATGTTCTTTTGGAGCAGCACCTAGTTCTTTAATTGTGATTCCCAA
AGGACCACCAGTTCTGACGGGTGGCCCCGCTGCCGCAACTATTATGGACTATGCCCCCATTGCCAATATTCCACCGTTTG
GCATGTGTTCTTCCCTGGCGAACCCGACGGTCGCCTCGGCAACAGCCGCCGCAATGGGTGTTCTCACCCCGATGCCCTGT
ATCCCCGTTATTCCAGCCCCTTGGACACCGGGTTCACCAACGGTGCTGATCAATAATTTTCCGGCATTAAACAATACATC
TAAGTGCTTTTGTACTTGGGGAGGGGTAATTCAGATAACTTATCCAGGACAAGTTACCACTCAAATTCCTTGA

Upstream 100 bases:

>100_bases
AAAATTGATGGGGCTTTGGTGACCGTTCAAGCCTCTGGGGTGAATACCATCAAGGGCTCAATCGTAAAGATCAATTGATA
GTGACAAGAAGGAGTAGTCA

Downstream 100 bases:

>100_bases
GAAAACGGGGCTGTTAGGGTTGACATTAACAATCCCGAGATTAATCGGACGCCGATTCCTGATCGGATGAGGGTTCCTTC
TGTCGTCCTGCTTTGCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MGQQVVMGASLQCSFGAAPSSLIVIPKGPPVLTGGPAAATIMDYAPIANIPPFGMCSSLANPTVASATAAAMGVLTPMPC
IPVIPAPWTPGSPTVLINNFPALNNTSKCFCTWGGVIQITYPGQVTTQIP

Sequences:

>Translated_130_residues
MGQQVVMGASLQCSFGAAPSSLIVIPKGPPVLTGGPAAATIMDYAPIANIPPFGMCSSLANPTVASATAAAMGVLTPMPC
IPVIPAPWTPGSPTVLINNFPALNNTSKCFCTWGGVIQITYPGQVTTQIP
>Mature_129_residues
GQQVVMGASLQCSFGAAPSSLIVIPKGPPVLTGGPAAATIMDYAPIANIPPFGMCSSLANPTVASATAAAMGVLTPMPCI
PVIPAPWTPGSPTVLINNFPALNNTSKCFCTWGGVIQITYPGQVTTQIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13126; Mature: 12994

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQQVVMGASLQCSFGAAPSSLIVIPKGPPVLTGGPAAATIMDYAPIANIPPFGMCSSLA
CCCEEEECCCEEEECCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCHHHHC
NPTVASATAAAMGVLTPMPCIPVIPAPWTPGSPTVLINNFPALNNTSKCFCTWGGVIQIT
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEE
YPGQVTTQIP
ECCEEEEECC
>Mature Secondary Structure 
GQQVVMGASLQCSFGAAPSSLIVIPKGPPVLTGGPAAATIMDYAPIANIPPFGMCSSLA
CCEEEECCCEEEECCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCHHHHC
NPTVASATAAAMGVLTPMPCIPVIPAPWTPGSPTVLINNFPALNNTSKCFCTWGGVIQIT
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEE
YPGQVTTQIP
ECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA