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The map label for this gene is pecM [H]

Identifier: 158338981

GI number: 158338981

Start: 5961258

End: 5962133

Strand: Direct

Name: pecM [H]

Synonym: AM1_5900

Alternate gene names: 158338981

Gene position: 5961258-5962133 (Clockwise)

Preceding gene: 158338979

Following gene: 158338982

Centisome position: 91.66

GC content: 53.2

Gene sequence:

>876_bases
ATGAATGCTCCCTCAGCTCGGCTGTTCAATATCTTGTTGACAGCTTTAGCCCCAATCGCTTGGGGGACCACCTATGTGAT
AACGACGGAGTTACTACCGCCAGGACATCCCTTGTTAGTGGCAGCTCTGAGAACACTTCCCATGGGTCTGATCCTAATCC
TTAGCCTGAGGCAGCTCCCCCAAGGTATCTGGTGGGGACGGATGTTGATTTTGGGGGGACTCAATATTGGTCTTTTCCAA
GCCCTCTTGTTCGTGGCGGCCTATCGACTCCCAGGGGGAGTAGCAGCAACCGCGGGTTCGATTCAGCCCTTGCTCGTGGT
CTTGTTTGCATGGCAACTCTTGGGAGAGAAGCCATCACGGAGATCAATCCTAGCTGCCATCACTGGATTTATGGGCGTGG
GTCTATTGGTGTTGGGACCCGAAGCTCAGCTGGATAGTGTGGGGATTGTGGCTGCGATCGCAAGTGCTGCAACCATGGGT
TTGGGAACGGTTTTGGTGAAGCGATGGCAATCTCCCGTGTCCCTGATGGTGTTTACGGCCTGGCAACTCACGGTAGGGGG
ACTGATGCTACTCCCCATTGCCCTGATTGTGGAAGGCCCCTTCGAGCAAATTTCGGGAACGAACCTATTAGGGTTTCTCT
ATTTAGGACTGATCGGCACTGGGCTGGCCTATGCCTTGTGGTTTCGAGGTATCCGTAAACTCAATGCTACTGCTGCTTCC
TATCTGGGGTTACTAAGCCCCATCGTGGCGACGCTGCTGGGGTATCTCTTTCTCCAGCAAACCCTGACCTCCCTTCAACT
GTTGGGTGTTGTGATCGTGTTGAGTAGCATTTTCTTAGGACAACAAACGTTTCGGAGATCAAGAGGGGCAGACTAG

Upstream 100 bases:

>100_bases
GCCGATTATCTTAACATCTGATAAATCTTAATTCCAAGATACTTGACATCAAGATAAATGCTAGAATCTCGACATAAAGT
ATCTTAATGTCAAGATAAAT

Downstream 100 bases:

>100_bases
GGTCTAAGGGGCTCTTCTCCTCTTGCGGTTATCGCAATTTACCTTCTGTCTGATGGATCCAAATCTCCAATCGCGAGATA
CCCTCGTACCGTAGATTTAC

Product: carboxylate/amino acid/amine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNAPSARLFNILLTALAPIAWGTTYVITTELLPPGHPLLVAALRTLPMGLILILSLRQLPQGIWWGRMLILGGLNIGLFQ
ALLFVAAYRLPGGVAATAGSIQPLLVVLFAWQLLGEKPSRRSILAAITGFMGVGLLVLGPEAQLDSVGIVAAIASAATMG
LGTVLVKRWQSPVSLMVFTAWQLTVGGLMLLPIALIVEGPFEQISGTNLLGFLYLGLIGTGLAYALWFRGIRKLNATAAS
YLGLLSPIVATLLGYLFLQQTLTSLQLLGVVIVLSSIFLGQQTFRRSRGAD

Sequences:

>Translated_291_residues
MNAPSARLFNILLTALAPIAWGTTYVITTELLPPGHPLLVAALRTLPMGLILILSLRQLPQGIWWGRMLILGGLNIGLFQ
ALLFVAAYRLPGGVAATAGSIQPLLVVLFAWQLLGEKPSRRSILAAITGFMGVGLLVLGPEAQLDSVGIVAAIASAATMG
LGTVLVKRWQSPVSLMVFTAWQLTVGGLMLLPIALIVEGPFEQISGTNLLGFLYLGLIGTGLAYALWFRGIRKLNATAAS
YLGLLSPIVATLLGYLFLQQTLTSLQLLGVVIVLSSIFLGQQTFRRSRGAD
>Mature_291_residues
MNAPSARLFNILLTALAPIAWGTTYVITTELLPPGHPLLVAALRTLPMGLILILSLRQLPQGIWWGRMLILGGLNIGLFQ
ALLFVAAYRLPGGVAATAGSIQPLLVVLFAWQLLGEKPSRRSILAAITGFMGVGLLVLGPEAQLDSVGIVAAIASAATMG
LGTVLVKRWQSPVSLMVFTAWQLTVGGLMLLPIALIVEGPFEQISGTNLLGFLYLGLIGTGLAYALWFRGIRKLNATAAS
YLGLLSPIVATLLGYLFLQQTLTSLQLLGVVIVLSSIFLGQQTFRRSRGAD

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30897; Mature: 30897

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPSARLFNILLTALAPIAWGTTYVITTELLPPGHPLLVAALRTLPMGLILILSLRQLP
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QGIWWGRMLILGGLNIGLFQALLFVAAYRLPGGVAATAGSIQPLLVVLFAWQLLGEKPSR
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCH
RSILAAITGFMGVGLLVLGPEAQLDSVGIVAAIASAATMGLGTVLVKRWQSPVSLMVFTA
HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
WQLTVGGLMLLPIALIVEGPFEQISGTNLLGFLYLGLIGTGLAYALWFRGIRKLNATAAS
HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGLLSPIVATLLGYLFLQQTLTSLQLLGVVIVLSSIFLGQQTFRRSRGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAPSARLFNILLTALAPIAWGTTYVITTELLPPGHPLLVAALRTLPMGLILILSLRQLP
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QGIWWGRMLILGGLNIGLFQALLFVAAYRLPGGVAATAGSIQPLLVVLFAWQLLGEKPSR
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCH
RSILAAITGFMGVGLLVLGPEAQLDSVGIVAAIASAATMGLGTVLVKRWQSPVSLMVFTA
HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
WQLTVGGLMLLPIALIVEGPFEQISGTNLLGFLYLGLIGTGLAYALWFRGIRKLNATAAS
HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGLLSPIVATLLGYLFLQQTLTSLQLLGVVIVLSSIFLGQQTFRRSRGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]