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The map label for this gene is 158338972

Identifier: 158338972

GI number: 158338972

Start: 5948493

End: 5949089

Strand: Reverse

Name: 158338972

Synonym: AM1_5891

Alternate gene names: NA

Gene position: 5949089-5948493 (Counterclockwise)

Preceding gene: 158338973

Following gene: 158338971

Centisome position: 91.47

GC content: 44.56

Gene sequence:

>597_bases
ATGAAGCCAGCTGAAGATTCTCATTATCTCCGTCAGGAACTGTATGAATTGATCCTAAATGACCCCTCCGTCTTTGATTT
TTTACAGGGGGCGACCTTAGATGGAGTTTGGTATTGGGATTTGGTTAACCCAGAGCATGAGTGGATGAGTCCTGAGTTTT
GGCTTTTTTTAGGGTATTCTCCAGCCCAAAAACAGCATCTAGCATCAGAGTGGCAAGATTTAATCCACCCAGAAGATTTA
GTCATTGCCCGCAAAAATTTAGAAAAGCATCTTGACAATCCAGCTCACCCCTACGATCAAATCGTTAGGTATACCAAGAA
AAATGGAAAGATAGTGTGGGTCCGATGTCGAGGGATTGCCATTCGAGATCAGTTTGACCAGCCCGTTCGAATGTTAGGAG
CCCATGTGGATGTCACGAAGCTGATGGAAGTAACAGAACTGCTAGAAATTCAGCTTCAAAGACTAGATGCCTGCAAGATG
CGGCTTTCGCTAGAACAGCAGAAAGTCAGCCAACTCGCCCATGAGAAATCGCAGTTGGAAGGACAACTGCAGCAAAAGGA
AAAAGAAATTCAGGTACTGAAACAACGGGTACTCTAG

Upstream 100 bases:

>100_bases
CCCTGACGTGCACATCCGCCCCAGGTAAAGGGGCAACCTTTATCCTCCAATTCCCCTTGCAGCCTGTGGTGCCGATATTG
CAATAGTCGCCGAAGTAACG

Downstream 100 bases:

>100_bases
TTGAGCCATACCCAATGAATTCTGAAACCAACCGGCATTTGTCTTGCCACACCCACCCATAGGGCCTCAGTGAAATAATC
TATTTCTGCGACTCCTATTG

Product: PAS domain-containing protein

Products: NA

Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; PAS Fold Family; PAS/PAC Sensor Hybrid Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Diguanylate Cyclase With PAS/PAC Sensor; PAS/PAC Sensor Signal Transduction Histidine Kinase; Sensor Protein FixL; PAS Sensor Protein; Diguanylate Cyclase With Pas/Pac Sensor; Diguanylate Cyclase/Phosphodiesterase; Signal-Transducing Kinase With PAS/PAC Domain; Diguanylate Cyclase; Two-Component Sensor Histidine Kinase; Sensor Protein; Two Component Sensor Histidine Kinase; Ggdef Domain Protein; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Signal Transduction Protein; PAS Domain-Containing Protein; Histidine Kinase Sensor Protein; Signal Transduction Histidine Kinase; Two-Component Hybrid Sensor Kinase/Response Regulator; PAS/PAC Sensor-Containing Diguanylate Cyclase

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKPAEDSHYLRQELYELILNDPSVFDFLQGATLDGVWYWDLVNPEHEWMSPEFWLFLGYSPAQKQHLASEWQDLIHPEDL
VIARKNLEKHLDNPAHPYDQIVRYTKKNGKIVWVRCRGIAIRDQFDQPVRMLGAHVDVTKLMEVTELLEIQLQRLDACKM
RLSLEQQKVSQLAHEKSQLEGQLQQKEKEIQVLKQRVL

Sequences:

>Translated_198_residues
MKPAEDSHYLRQELYELILNDPSVFDFLQGATLDGVWYWDLVNPEHEWMSPEFWLFLGYSPAQKQHLASEWQDLIHPEDL
VIARKNLEKHLDNPAHPYDQIVRYTKKNGKIVWVRCRGIAIRDQFDQPVRMLGAHVDVTKLMEVTELLEIQLQRLDACKM
RLSLEQQKVSQLAHEKSQLEGQLQQKEKEIQVLKQRVL
>Mature_198_residues
MKPAEDSHYLRQELYELILNDPSVFDFLQGATLDGVWYWDLVNPEHEWMSPEFWLFLGYSPAQKQHLASEWQDLIHPEDL
VIARKNLEKHLDNPAHPYDQIVRYTKKNGKIVWVRCRGIAIRDQFDQPVRMLGAHVDVTKLMEVTELLEIQLQRLDACKM
RLSLEQQKVSQLAHEKSQLEGQLQQKEKEIQVLKQRVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23409; Mature: 23409

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAEDSHYLRQELYELILNDPSVFDFLQGATLDGVWYWDLVNPEHEWMSPEFWLFLGYS
CCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCHHHHCCCCEEEEECCC
PAQKQHLASEWQDLIHPEDLVIARKNLEKHLDNPAHPYDQIVRYTKKNGKIVWVRCRGIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCEE
IRDQFDQPVRMLGAHVDVTKLMEVTELLEIQLQRLDACKMRLSLEQQKVSQLAHEKSQLE
ECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQLQQKEKEIQVLKQRVL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPAEDSHYLRQELYELILNDPSVFDFLQGATLDGVWYWDLVNPEHEWMSPEFWLFLGYS
CCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCHHHHCCCCEEEEECCC
PAQKQHLASEWQDLIHPEDLVIARKNLEKHLDNPAHPYDQIVRYTKKNGKIVWVRCRGIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCEE
IRDQFDQPVRMLGAHVDVTKLMEVTELLEIQLQRLDACKMRLSLEQQKVSQLAHEKSQLE
ECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQLQQKEKEIQVLKQRVL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA