Click here to switch to the map view.

The map label for this gene is 158338966

Identifier: 158338966

GI number: 158338966

Start: 5943046

End: 5943861

Strand: Reverse

Name: 158338966

Synonym: AM1_5885

Alternate gene names: NA

Gene position: 5943861-5943046 (Counterclockwise)

Preceding gene: 158338967

Following gene: 158338965

Centisome position: 91.39

GC content: 45.22

Gene sequence:

>816_bases
ATGTTTCGTTTACATCCCTTCATTGCACTTAGGTCTTCGTCTTCAGAATTAGGGTTTAGCCTGGCTGAAAAAATGGTAAT
TGTTGCCATTATCGGCATTGCCGCTGCTGTTTCAGCTCCCAGTATTATGGCTGCAATGAATCGAGCCAAAGTAAAACAGA
CGATGGCTAAAGTACAGGCCGCGTTGAATGAAACGCAACGAGAAGCGATCAAAGGTAATAAAATCTGCACTCTGACCCTT
AATTTTGATGCAGGACAAATTTCGGGATCTTGTCTTAAAGTTAGCGATCGCAGTTTGGAAACCAGTGTGGCTATCGCGAC
AAATTTGATTGATCCCACAGCCAACACAGCCCAAGACGATGAAAGTCAGCCTGTGTGGATCAGTTCAGATGTCCAAGCAC
CCTCCCTTGGCCTCAATGACGGAGAGAACATTTCGCAGATTGCCATGGCATCTGCACCCGAGCATAAAAGCCAATGGACC
GACGCAGGTATGGTGGTTCAGGTTATTGCTGAAAAATGCAAAGGGAATATTGATGAAGGCTTAGGGCTAGGGACTTGTAA
AGATCAGCTCATTCCCATTAAATATGGCGTTTTAGGAAATCCAGAGTTTGCCATCATTAGCGCTCAAGCCAGTCCAACCG
ACCCCAGTGGCAAGATTATTTTTTTCAATCCAAACAATGCTAGTGGAAAAAAGCACTGCATCGCTATTTCCAACACCTTG
GGCCTAACCCGAATCGGTACTTACAAAGGTGATATCCAACCCATTGCCATTACTGATGCAGGCCGTTGTACAGCTGATAA
CTGGGAAGATCAGTAA

Upstream 100 bases:

>100_bases
TTTTAGCAATTCTTATGGGTGATGAGGAGTTTTTTTCATGGGTGCCCCACTAATCAAGTGGTCACCCTTTAGTCTTTGTT
TCCTTCCCCTGGAATTTGCC

Downstream 100 bases:

>100_bases
TAGGCGAGTAGAGGGATAAAGTTTGAAAAGAGCTGCTGAGCTAAGAGCCTCCCTCGCACAGTGATTAAAGCCTTACGAAA
CTACCACTTGTGGCACAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MFRLHPFIALRSSSSELGFSLAEKMVIVAIIGIAAAVSAPSIMAAMNRAKVKQTMAKVQAALNETQREAIKGNKICTLTL
NFDAGQISGSCLKVSDRSLETSVAIATNLIDPTANTAQDDESQPVWISSDVQAPSLGLNDGENISQIAMASAPEHKSQWT
DAGMVVQVIAEKCKGNIDEGLGLGTCKDQLIPIKYGVLGNPEFAIISAQASPTDPSGKIIFFNPNNASGKKHCIAISNTL
GLTRIGTYKGDIQPIAITDAGRCTADNWEDQ

Sequences:

>Translated_271_residues
MFRLHPFIALRSSSSELGFSLAEKMVIVAIIGIAAAVSAPSIMAAMNRAKVKQTMAKVQAALNETQREAIKGNKICTLTL
NFDAGQISGSCLKVSDRSLETSVAIATNLIDPTANTAQDDESQPVWISSDVQAPSLGLNDGENISQIAMASAPEHKSQWT
DAGMVVQVIAEKCKGNIDEGLGLGTCKDQLIPIKYGVLGNPEFAIISAQASPTDPSGKIIFFNPNNASGKKHCIAISNTL
GLTRIGTYKGDIQPIAITDAGRCTADNWEDQ
>Mature_271_residues
MFRLHPFIALRSSSSELGFSLAEKMVIVAIIGIAAAVSAPSIMAAMNRAKVKQTMAKVQAALNETQREAIKGNKICTLTL
NFDAGQISGSCLKVSDRSLETSVAIATNLIDPTANTAQDDESQPVWISSDVQAPSLGLNDGENISQIAMASAPEHKSQWT
DAGMVVQVIAEKCKGNIDEGLGLGTCKDQLIPIKYGVLGNPEFAIISAQASPTDPSGKIIFFNPNNASGKKHCIAISNTL
GLTRIGTYKGDIQPIAITDAGRCTADNWEDQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28661; Mature: 28661

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLHPFIALRSSSSELGFSLAEKMVIVAIIGIAAAVSAPSIMAAMNRAKVKQTMAKVQA
CCEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALNETQREAIKGNKICTLTLNFDAGQISGSCLKVSDRSLETSVAIATNLIDPTANTAQDD
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCHHHHEEEECCCCCCCCCCCCC
ESQPVWISSDVQAPSLGLNDGENISQIAMASAPEHKSQWTDAGMVVQVIAEKCKGNIDEG
CCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCC
LGLGTCKDQLIPIKYGVLGNPEFAIISAQASPTDPSGKIIFFNPNNASGKKHCIAISNTL
CCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEECCC
GLTRIGTYKGDIQPIAITDAGRCTADNWEDQ
CEEEECCCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MFRLHPFIALRSSSSELGFSLAEKMVIVAIIGIAAAVSAPSIMAAMNRAKVKQTMAKVQA
CCEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALNETQREAIKGNKICTLTLNFDAGQISGSCLKVSDRSLETSVAIATNLIDPTANTAQDD
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCHHHHEEEECCCCCCCCCCCCC
ESQPVWISSDVQAPSLGLNDGENISQIAMASAPEHKSQWTDAGMVVQVIAEKCKGNIDEG
CCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCC
LGLGTCKDQLIPIKYGVLGNPEFAIISAQASPTDPSGKIIFFNPNNASGKKHCIAISNTL
CCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEECCC
GLTRIGTYKGDIQPIAITDAGRCTADNWEDQ
CEEEECCCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA