| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is dam [C]
Identifier: 158338956
GI number: 158338956
Start: 5932748
End: 5933659
Strand: Direct
Name: dam [C]
Synonym: AM1_5873
Alternate gene names: 158338956
Gene position: 5932748-5933659 (Clockwise)
Preceding gene: 158338955
Following gene: 158338957
Centisome position: 91.22
GC content: 51.32
Gene sequence:
>912_bases ATGTCGTTTGCTCTGTCTACGCGATCGCTTCCCCAGATTACCCGGCCAGCATTCCGGTATTTTGGCGGTAAATGGTTACT CGGTCCCTGGATTTGGTCTTACTTCCCGGATCATGACTGTTATGTCGAGCCCTTTGGCGGAGCCTTTAGTGTGGGACTGC AAAAACCACCCGCTGCCAATGACATCTACAACGACCTTCATCAAGCAGGCGTTAACTTCTTTCAAGTCCTCCAACAGCAG CCTGATTCCCTCCTAGAGGCCATTGCCCAATCCCCTCGCACAGCTGCAGAATTCCAGTGCTGTCTGCAACCTTGTGATCA GCCCTTGGAATGGGCTAGACGATATTATCTCTATTGTCAGCTGGCCTATATCGGAGGCGGTGGTCGCTGGAGCCATGGCC TGAGTTCCTCCAGACTGCAAGCGTCGAGTTCTTGGGATGTGGGTCACCTGACTGCGATCGCTGACCGAATCCAAACCGTC CAATTCCTCAATCTAGATGCTTTCAATTGCATACAGATCTATGACTCCCCTAGTACTTTGTTCTACTGCGACCCACCCTA TCCCCATAGTGCAAGGGGCAGTAAAGATAAACGGCACCAGAATCCAGTAACACCCCGACGTCAGTACCGGCATGAGATGA CCGACGAGGATCATCGCCAACTTGCGGAAATATTGCATGGCATTCAGGGACGTGCGATCATCAGCGGTTATGCCTGTCTA CTCTACGAGGAGCTTTACTCCGACTGGAAACGAGTTGAACAAAAGGCATTTACAACTTCTGGCGTGAAGCGGGTAGAGTG CTTATGGTTATCCCCCGAGCCTCCTCAGATCGTTCAGGTTAAGCTATCCCCAAAACCGTTCTCCCTGACTCAGAAGATAA GCGCGATACCCGAAGCCTATACTAGAAAATGA
Upstream 100 bases:
>100_bases GCAACTGCACTGCCTGAGGCAGCAAGGGCTGCCTCAGGTTAGAAGATTTTTTGTATCCATAGAATAGTACATAAGAACTA TAAGAGTACTTTCTGAAATC
Downstream 100 bases:
>100_bases GGCTGATATCGCAAATGAGCAGGCTGAGTATGATCGTCTCATTGTGGCAGCAGCAGCCCAATAAGTGAGTCAGAGCCATC TCTTCCTCGATAAGGACTTT
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]
Alternate protein names: Methyltransferase; DNA Adenine Methylase; Adenine-Specific DNA Methyltransferase; DNA Adenine Methyltransferase; Site-Specific DNA Methylase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; Phage Methylase; DNA Adenine Methylase Subfamily; Prophage DNA Methylase; Methylase
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSFALSTRSLPQITRPAFRYFGGKWLLGPWIWSYFPDHDCYVEPFGGAFSVGLQKPPAANDIYNDLHQAGVNFFQVLQQQ PDSLLEAIAQSPRTAAEFQCCLQPCDQPLEWARRYYLYCQLAYIGGGGRWSHGLSSSRLQASSSWDVGHLTAIADRIQTV QFLNLDAFNCIQIYDSPSTLFYCDPPYPHSARGSKDKRHQNPVTPRRQYRHEMTDEDHRQLAEILHGIQGRAIISGYACL LYEELYSDWKRVEQKAFTTSGVKRVECLWLSPEPPQIVQVKLSPKPFSLTQKISAIPEAYTRK
Sequences:
>Translated_303_residues MSFALSTRSLPQITRPAFRYFGGKWLLGPWIWSYFPDHDCYVEPFGGAFSVGLQKPPAANDIYNDLHQAGVNFFQVLQQQ PDSLLEAIAQSPRTAAEFQCCLQPCDQPLEWARRYYLYCQLAYIGGGGRWSHGLSSSRLQASSSWDVGHLTAIADRIQTV QFLNLDAFNCIQIYDSPSTLFYCDPPYPHSARGSKDKRHQNPVTPRRQYRHEMTDEDHRQLAEILHGIQGRAIISGYACL LYEELYSDWKRVEQKAFTTSGVKRVECLWLSPEPPQIVQVKLSPKPFSLTQKISAIPEAYTRK >Mature_302_residues SFALSTRSLPQITRPAFRYFGGKWLLGPWIWSYFPDHDCYVEPFGGAFSVGLQKPPAANDIYNDLHQAGVNFFQVLQQQP DSLLEAIAQSPRTAAEFQCCLQPCDQPLEWARRYYLYCQLAYIGGGGRWSHGLSSSRLQASSSWDVGHLTAIADRIQTVQ FLNLDAFNCIQIYDSPSTLFYCDPPYPHSARGSKDKRHQNPVTPRRQYRHEMTDEDHRQLAEILHGIQGRAIISGYACLL YEELYSDWKRVEQKAFTTSGVKRVECLWLSPEPPQIVQVKLSPKPFSLTQKISAIPEAYTRK
Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 34600; Mature: 34469
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFALSTRSLPQITRPAFRYFGGKWLLGPWIWSYFPDHDCYVEPFGGAFSVGLQKPPAAN CCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHCCCCCCEECCCCCEEECCCCCCCCCH DIYNDLHQAGVNFFQVLQQQPDSLLEAIAQSPRTAAEFQCCLQPCDQPLEWARRYYLYCQ HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEEEEE LAYIGGGGRWSHGLSSSRLQASSSWDVGHLTAIADRIQTVQFLNLDAFNCIQIYDSPSTL EEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE FYCDPPYPHSARGSKDKRHQNPVTPRRQYRHEMTDEDHRQLAEILHGIQGRAIISGYACL EEECCCCCCCCCCCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH LYEELYSDWKRVEQKAFTTSGVKRVECLWLSPEPPQIVQVKLSPKPFSLTQKISAIPEAY HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCHHH TRK CCC >Mature Secondary Structure SFALSTRSLPQITRPAFRYFGGKWLLGPWIWSYFPDHDCYVEPFGGAFSVGLQKPPAAN CCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHCCCCCCEECCCCCEEECCCCCCCCCH DIYNDLHQAGVNFFQVLQQQPDSLLEAIAQSPRTAAEFQCCLQPCDQPLEWARRYYLYCQ HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEEEEE LAYIGGGGRWSHGLSSSRLQASSSWDVGHLTAIADRIQTVQFLNLDAFNCIQIYDSPSTL EEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE FYCDPPYPHSARGSKDKRHQNPVTPRRQYRHEMTDEDHRQLAEILHGIQGRAIISGYACL EEECCCCCCCCCCCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH LYEELYSDWKRVEQKAFTTSGVKRVECLWLSPEPPQIVQVKLSPKPFSLTQKISAIPEAY HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCHHH TRK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]
Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA