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The map label for this gene is 158338892

Identifier: 158338892

GI number: 158338892

Start: 5888612

End: 5889295

Strand: Direct

Name: 158338892

Synonym: AM1_5806

Alternate gene names: NA

Gene position: 5888612-5889295 (Clockwise)

Preceding gene: 158338889

Following gene: 158338895

Centisome position: 90.54

GC content: 50.15

Gene sequence:

>684_bases
GTGGATATCCCCATGCGTAAGGTCTTTAATGCAGATAGTTTTACGGGTCGAATGGCCATCTTGGTGGATGAGTATAAAAA
TGCCACTCATCTCGCCAAAGTGGTCGGCGTGAATGACCGAACGATCCGAAAATGGATGGCGGGAACGGAACCCGCTCGAA
ACTATCTGGAGCTATTGGCTGAAAAGCTTGAGGTCAATATCGAATGGCTGGTACTCGGTCGGGGACCTATTCGGCGGGCG
GATGGGGGGATTGGTGATGGCACTTATGTCCAAATCCCTCTCTATGATGTTCGAGCGGGGGCTGGGGAAGGCATGATTGC
GGAGGACAAGGAGCAGATCGAGGAACTGATGGCGTTTAGTCGATCCTGGATTCGTAGTGAATTACGTACTAGCCCAGCTC
ATTTGAGTTTGATTCATGTCAGTGGAGATTCGATGGAACCAACTCTGCGACCTGGGGATGTGGTGCTGGTGGATCAGCAT
CAAGCGGAAGGGGGGACGGATGGGGTTTATGTGTTGCGTCGGGATGGGCATTTGCAGATTAAACGTCTGCATTGGTTATC
AGGGAAAGTTTTGAAGATTATTAGTGATAACCCTATCTATCAGCCGATTGAGGTGGATTTATCTCAGTTGACGGAGGAGT
TTCAGATTATTGGCCGAGTGATTTGGGGCGGGAAGCGGTTTTGA

Upstream 100 bases:

>100_bases
ACACCTGCAGAAAGCTAATTTCTTTAAACAGTATATATGTACTATTTCAAAAAAGGATATTCATGCAGAATAGTCATATA
ATTCTTGGCATGAGTCAGTG

Downstream 100 bases:

>100_bases
GCTTTGGTAATTGATGCAGGGTTTTGATGACTACTCCGCTCTTGAAAATCCAGACACACTGTTTGGTGAACACTTGGAAG
CTATAGCCCGCCAACTTTAA

Product: S24 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDIPMRKVFNADSFTGRMAILVDEYKNATHLAKVVGVNDRTIRKWMAGTEPARNYLELLAEKLEVNIEWLVLGRGPIRRA
DGGIGDGTYVQIPLYDVRAGAGEGMIAEDKEQIEELMAFSRSWIRSELRTSPAHLSLIHVSGDSMEPTLRPGDVVLVDQH
QAEGGTDGVYVLRRDGHLQIKRLHWLSGKVLKIISDNPIYQPIEVDLSQLTEEFQIIGRVIWGGKRF

Sequences:

>Translated_227_residues
MDIPMRKVFNADSFTGRMAILVDEYKNATHLAKVVGVNDRTIRKWMAGTEPARNYLELLAEKLEVNIEWLVLGRGPIRRA
DGGIGDGTYVQIPLYDVRAGAGEGMIAEDKEQIEELMAFSRSWIRSELRTSPAHLSLIHVSGDSMEPTLRPGDVVLVDQH
QAEGGTDGVYVLRRDGHLQIKRLHWLSGKVLKIISDNPIYQPIEVDLSQLTEEFQIIGRVIWGGKRF
>Mature_227_residues
MDIPMRKVFNADSFTGRMAILVDEYKNATHLAKVVGVNDRTIRKWMAGTEPARNYLELLAEKLEVNIEWLVLGRGPIRRA
DGGIGDGTYVQIPLYDVRAGAGEGMIAEDKEQIEELMAFSRSWIRSELRTSPAHLSLIHVSGDSMEPTLRPGDVVLVDQH
QAEGGTDGVYVLRRDGHLQIKRLHWLSGKVLKIISDNPIYQPIEVDLSQLTEEFQIIGRVIWGGKRF

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 25546; Mature: 25546

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIPMRKVFNADSFTGRMAILVDEYKNATHLAKVVGVNDRTIRKWMAGTEPARNYLELLA
CCCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
EKLEVNIEWLVLGRGPIRRADGGIGDGTYVQIPLYDVRAGAGEGMIAEDKEQIEELMAFS
HHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
RSWIRSELRTSPAHLSLIHVSGDSMEPTLRPGDVVLVDQHQAEGGTDGVYVLRRDGHLQI
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEE
KRLHWLSGKVLKIISDNPIYQPIEVDLSQLTEEFQIIGRVIWGGKRF
EEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIPMRKVFNADSFTGRMAILVDEYKNATHLAKVVGVNDRTIRKWMAGTEPARNYLELLA
CCCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
EKLEVNIEWLVLGRGPIRRADGGIGDGTYVQIPLYDVRAGAGEGMIAEDKEQIEELMAFS
HHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
RSWIRSELRTSPAHLSLIHVSGDSMEPTLRPGDVVLVDQHQAEGGTDGVYVLRRDGHLQI
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEE
KRLHWLSGKVLKIISDNPIYQPIEVDLSQLTEEFQIIGRVIWGGKRF
EEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]