| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338881
Identifier: 158338881
GI number: 158338881
Start: 5876019
End: 5877227
Strand: Reverse
Name: 158338881
Synonym: AM1_5794
Alternate gene names: NA
Gene position: 5877227-5876019 (Counterclockwise)
Preceding gene: 158338882
Following gene: 158338879
Centisome position: 90.37
GC content: 48.55
Gene sequence:
>1209_bases TTGGGGTGTGGGCATTATTTCTTTAACGGGTTAGGCCCCTGTTTCCATGTTGGGTGTATGACTGCTTATCTTCCTTGGCT AATCTTTCCGTTTTGCTGCACGGCGGTACTGTATTACTGCTATGCCATCTATGCGACGGTTGATTTTTTCCGTCAAGACC ATCGGGTTGATCCTGACTTTCATCCTCCGGTGACCATCCTCAAACCCCTATGTGGCGTTGATGTAAACACCTACGAGAAT TTAGCTTCCTTTTGCCATCAGGATTATGCTGAATATCAAGTCATCTTTAGCGTACGGGAGGCGACGGACCCCTGTCTTCC CGTTGTAGAGCAGCTAATTTTGGCATTCCCTGATGTGGATATTGAGTTGGTAGTGTGCGATCGCACCATTGGTACCAATC TGAAAGTCAGCAATCTGGCCAATGGGGTGGAGAAGGCTAAGCATGACGTGATAGTGCTGGCCGATTGCGATATTTTGGTT CAATCTGATTATTTACAGCAAATTGTTCAACCCTTGGCTAACCCTGAAGTGGGCGTGGTGACTTGCCTCTATAATTCTTG GGCTAAGGGCTGGTTAGCTGGATTTGAAGCCTTGGGGATTACCACCCGCAACCATGCCAATGTACTCGCGGCCCATAAAT TGGAAGGAATGCATTTTGCCTTTGGTTCCACTATTGTGATTCGACAAGCGGCCTTAGCCAAGATTGGAGGTTTTGCGGCC TTAGCAGATCACCTGGCTGATGATTTCCATATGGGGAATTTGCCCACCCAAGTAGGCTATCAGGTTGTTTTGTCCCCCTA TATTGTGGAACATCAACTGGCGACCACAAATCTATCTGAATTCTTTCATCGACAAGCTCGCTGGGCTCGGTGTATCCGTG TAGAGCGTTTCTGGGGCTACGTGGGGTTACTGTTCACCTTTGGCACCACAAGTGGAGTCTTATTTCTGCTGGCAACTCAA GGGTCCATTTTGGGGTGGTCTGTACTGGTCGTTATGCTAGCTAGCCGCTGGTTAATGGCTTGGGTGATTGCGATCTACTA TCTTCATGATCGGGTGGCTCAGAGGCTATGGTGGTTGGTCCCCCTGCGGGACTTGATCAACTTTGCCATTTGGGGCTATG GAATGGTGGGAACGACAGTGGAATGGCGTGGATATCGGTATAAGCTGCGCAAAAATGGCAAGCTTACCCAAATAATTTCC ACTGGATAG
Upstream 100 bases:
>100_bases CGGCTACCGGCCTGGGCTACATTATCAATCTCTGTGGTGCCCACTTTATCCTTAAGGAGCATATTTCTTCAGGACGGTTA GCTGGCATTATTGTCATTGG
Downstream 100 bases:
>100_bases TGTTTTCTGGCTTTTTTATTGCCTGGCAATTCAACGATAAAACAAACCCCTGCTAGCCATCAAAACTAGCAGGGGGCTTT AATCTACGGGTGATCAATAA
Product: glycosyl transferase, group 2 family protein
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MGCGHYFFNGLGPCFHVGCMTAYLPWLIFPFCCTAVLYYCYAIYATVDFFRQDHRVDPDFHPPVTILKPLCGVDVNTYEN LASFCHQDYAEYQVIFSVREATDPCLPVVEQLILAFPDVDIELVVCDRTIGTNLKVSNLANGVEKAKHDVIVLADCDILV QSDYLQQIVQPLANPEVGVVTCLYNSWAKGWLAGFEALGITTRNHANVLAAHKLEGMHFAFGSTIVIRQAALAKIGGFAA LADHLADDFHMGNLPTQVGYQVVLSPYIVEHQLATTNLSEFFHRQARWARCIRVERFWGYVGLLFTFGTTSGVLFLLATQ GSILGWSVLVVMLASRWLMAWVIAIYYLHDRVAQRLWWLVPLRDLINFAIWGYGMVGTTVEWRGYRYKLRKNGKLTQIIS TG
Sequences:
>Translated_402_residues MGCGHYFFNGLGPCFHVGCMTAYLPWLIFPFCCTAVLYYCYAIYATVDFFRQDHRVDPDFHPPVTILKPLCGVDVNTYEN LASFCHQDYAEYQVIFSVREATDPCLPVVEQLILAFPDVDIELVVCDRTIGTNLKVSNLANGVEKAKHDVIVLADCDILV QSDYLQQIVQPLANPEVGVVTCLYNSWAKGWLAGFEALGITTRNHANVLAAHKLEGMHFAFGSTIVIRQAALAKIGGFAA LADHLADDFHMGNLPTQVGYQVVLSPYIVEHQLATTNLSEFFHRQARWARCIRVERFWGYVGLLFTFGTTSGVLFLLATQ GSILGWSVLVVMLASRWLMAWVIAIYYLHDRVAQRLWWLVPLRDLINFAIWGYGMVGTTVEWRGYRYKLRKNGKLTQIIS TG >Mature_401_residues GCGHYFFNGLGPCFHVGCMTAYLPWLIFPFCCTAVLYYCYAIYATVDFFRQDHRVDPDFHPPVTILKPLCGVDVNTYENL ASFCHQDYAEYQVIFSVREATDPCLPVVEQLILAFPDVDIELVVCDRTIGTNLKVSNLANGVEKAKHDVIVLADCDILVQ SDYLQQIVQPLANPEVGVVTCLYNSWAKGWLAGFEALGITTRNHANVLAAHKLEGMHFAFGSTIVIRQAALAKIGGFAAL ADHLADDFHMGNLPTQVGYQVVLSPYIVEHQLATTNLSEFFHRQARWARCIRVERFWGYVGLLFTFGTTSGVLFLLATQG SILGWSVLVVMLASRWLMAWVIAIYYLHDRVAQRLWWLVPLRDLINFAIWGYGMVGTTVEWRGYRYKLRKNGKLTQIIST G
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=349, Percent_Identity=26.9340974212034, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI25147526, Length=253, Percent_Identity=27.6679841897233, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI32566973, Length=382, Percent_Identity=23.0366492146597, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI32564728, Length=267, Percent_Identity=27.3408239700375, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25149574, Length=266, Percent_Identity=27.4436090225564, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25149577, Length=266, Percent_Identity=27.4436090225564, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI25149580, Length=267, Percent_Identity=27.3408239700375, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24657569, Length=229, Percent_Identity=31.0043668122271, Blast_Score=121, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 45297; Mature: 45166
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCGHYFFNGLGPCFHVGCMTAYLPWLIFPFCCTAVLYYCYAIYATVDFFRQDHRVDPDF CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HPPVTILKPLCGVDVNTYENLASFCHQDYAEYQVIFSVREATDPCLPVVEQLILAFPDVD CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHCCCCC IELVVCDRTIGTNLKVSNLANGVEKAKHDVIVLADCDILVQSDYLQQIVQPLANPEVGVV EEEEEECCCCCCCEEHHHHHHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHCCCCCEEE TCLYNSWAKGWLAGFEALGITTRNHANVLAAHKLEGMHFAFGSTIVIRQAALAKIGGFAA EEHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHH LADHLADDFHMGNLPTQVGYQVVLSPYIVEHQLATTNLSEFFHRQARWARCIRVERFWGY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VGLLFTFGTTSGVLFLLATQGSILGWSVLVVMLASRWLMAWVIAIYYLHDRVAQRLWWLV HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLRDLINFAIWGYGMVGTTVEWRGYRYKLRKNGKLTQIISTG HHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCEEEEEECC >Mature Secondary Structure GCGHYFFNGLGPCFHVGCMTAYLPWLIFPFCCTAVLYYCYAIYATVDFFRQDHRVDPDF CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HPPVTILKPLCGVDVNTYENLASFCHQDYAEYQVIFSVREATDPCLPVVEQLILAFPDVD CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHCCCCC IELVVCDRTIGTNLKVSNLANGVEKAKHDVIVLADCDILVQSDYLQQIVQPLANPEVGVV EEEEEECCCCCCCEEHHHHHHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHCCCCCEEE TCLYNSWAKGWLAGFEALGITTRNHANVLAAHKLEGMHFAFGSTIVIRQAALAKIGGFAA EEHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHH LADHLADDFHMGNLPTQVGYQVVLSPYIVEHQLATTNLSEFFHRQARWARCIRVERFWGY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VGLLFTFGTTSGVLFLLATQGSILGWSVLVVMLASRWLMAWVIAIYYLHDRVAQRLWWLV HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLRDLINFAIWGYGMVGTTVEWRGYRYKLRKNGKLTQIISTG HHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA