| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338869
Identifier: 158338869
GI number: 158338869
Start: 5864047
End: 5864919
Strand: Direct
Name: 158338869
Synonym: AM1_5782
Alternate gene names: NA
Gene position: 5864047-5864919 (Clockwise)
Preceding gene: 158338868
Following gene: 158338872
Centisome position: 90.16
GC content: 48.11
Gene sequence:
>873_bases TTGAAATTCCGTTGGCTCCTGGCCCTCCTAGTTGAGCTGTGGCCCTATTGGTGCGTCATCCCTTGCTTAAGTTTTATCCT GGTCGTCGCCATCCCGAAGCTGCGACAGCAATCAGCTCGCTTGAGTATTGCCACACTCATCCTAATTTTGATTGTGGCTC CTGTGATTAATTGGGTCGGTCTTCCCCAATTGGGGTCAACTCCTGATGGGATGCGGGTAATGGCTTACAACATCTGGATT GACAATCCCAATACCGATGCGATCGCACAATCAATTCAGGGTGAAGATCCAGATATTTTGTTCCTGTCAGAAGTCAGCAA ACCCATGATGGCCGAACTGCAATCTCGGCTGAGTTATCCCCATGACTATCGAACGGAAGGTAGTAATAATGCCCTGTTCA GTCGATATCCGATCCTGGAAGCGACTACGAATGATTTTGGGGTTACGACCAAAGGCCGAACCTTTAGCCTGGTGGCAAAA TTGCAAGTGGAGGGTAACCCAGTAACGATCATTGGGATTCACCCCCCTGTGCCCATCATTCCAGGATTTTTTCATATCCG GAATCGGCAATTGGATACCTTTGCCAAAGCCAGTCAATCTATAGAGGGAAAGCTGATCGTTTTAGGGGATTTTAATGCAA CCCCTTGGTCACCGTATTTTCAGCGTTTTGAGCGAATTAGCCAGCTTCAAAATTCAGGTCATCGCCAGTGGATTTGGGCA ACGTGGTATTTCAATCAAACCCTGACTACCCGATATATCAAAATCCCTTTGGACCACATCGAAACGCGAGGTTTTACCGT TCTCAAAACCTGGACGGGGCAGACAGGGGGCTCCGATCACAAGCCAATTGTTACTGTTCTAGAACCGACCTAG
Upstream 100 bases:
>100_bases CCCAACTTAAATCCAGCTTTTAGCCCTTATGTATTTTCGGTTGATATCTAGTGCAATACTGCTCATCAGCGGGCTGGAAG TACTGGTTTATTACAGTCCT
Downstream 100 bases:
>100_bases ACAACCACGCGCCTTCTAAGCCGCCAACTTTAAGAAGTCTTGTAGCTCTGCAATTAACCACTCATTCTCTAAGTTATCCA AATCCCCACTAAACTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKFRWLLALLVELWPYWCVIPCLSFILVVAIPKLRQQSARLSIATLILILIVAPVINWVGLPQLGSTPDGMRVMAYNIWI DNPNTDAIAQSIQGEDPDILFLSEVSKPMMAELQSRLSYPHDYRTEGSNNALFSRYPILEATTNDFGVTTKGRTFSLVAK LQVEGNPVTIIGIHPPVPIIPGFFHIRNRQLDTFAKASQSIEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHRQWIWA TWYFNQTLTTRYIKIPLDHIETRGFTVLKTWTGQTGGSDHKPIVTVLEPT
Sequences:
>Translated_290_residues MKFRWLLALLVELWPYWCVIPCLSFILVVAIPKLRQQSARLSIATLILILIVAPVINWVGLPQLGSTPDGMRVMAYNIWI DNPNTDAIAQSIQGEDPDILFLSEVSKPMMAELQSRLSYPHDYRTEGSNNALFSRYPILEATTNDFGVTTKGRTFSLVAK LQVEGNPVTIIGIHPPVPIIPGFFHIRNRQLDTFAKASQSIEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHRQWIWA TWYFNQTLTTRYIKIPLDHIETRGFTVLKTWTGQTGGSDHKPIVTVLEPT >Mature_290_residues MKFRWLLALLVELWPYWCVIPCLSFILVVAIPKLRQQSARLSIATLILILIVAPVINWVGLPQLGSTPDGMRVMAYNIWI DNPNTDAIAQSIQGEDPDILFLSEVSKPMMAELQSRLSYPHDYRTEGSNNALFSRYPILEATTNDFGVTTKGRTFSLVAK LQVEGNPVTIIGIHPPVPIIPGFFHIRNRQLDTFAKASQSIEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHRQWIWA TWYFNQTLTTRYIKIPLDHIETRGFTVLKTWTGQTGGSDHKPIVTVLEPT
Specific function: Unknown
COG id: COG3021
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32921; Mature: 32921
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRWLLALLVELWPYWCVIPCLSFILVVAIPKLRQQSARLSIATLILILIVAPVINWVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPQLGSTPDGMRVMAYNIWIDNPNTDAIAQSIQGEDPDILFLSEVSKPMMAELQSRLSYP CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHCCC HDYRTEGSNNALFSRYPILEATTNDFGVTTKGRTFSLVAKLQVEGNPVTIIGIHPPVPII CCCCCCCCCCCEEEECCEEEECCCCCCCEECCCEEEEEEEEEECCCCEEEEEECCCCCCC PGFFHIRNRQLDTFAKASQSIEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHRQWIWA CCCCEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE TWYFNQTLTTRYIKIPLDHIETRGFTVLKTWTGQTGGSDHKPIVTVLEPT EEEECCCEEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCC >Mature Secondary Structure MKFRWLLALLVELWPYWCVIPCLSFILVVAIPKLRQQSARLSIATLILILIVAPVINWVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPQLGSTPDGMRVMAYNIWIDNPNTDAIAQSIQGEDPDILFLSEVSKPMMAELQSRLSYP CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHCCC HDYRTEGSNNALFSRYPILEATTNDFGVTTKGRTFSLVAKLQVEGNPVTIIGIHPPVPII CCCCCCCCCCCEEEECCEEEECCCCCCCEECCCEEEEEEEEEECCCCEEEEEECCCCCCC PGFFHIRNRQLDTFAKASQSIEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHRQWIWA CCCCEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE TWYFNQTLTTRYIKIPLDHIETRGFTVLKTWTGQTGGSDHKPIVTVLEPT EEEECCCEEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA