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The map label for this gene is 158338828

Identifier: 158338828

GI number: 158338828

Start: 5820023

End: 5820946

Strand: Direct

Name: 158338828

Synonym: AM1_5741

Alternate gene names: NA

Gene position: 5820023-5820946 (Clockwise)

Preceding gene: 158338825

Following gene: 158338834

Centisome position: 89.49

GC content: 46.86

Gene sequence:

>924_bases
GTGCAAAAAAAGTCTAACCGCTGGTTCATTTGGGTTTTTGTTGTTGTTGCCGTTGTCGCCTTAGTTGGATTTTCCTTCGG
CTCGATCTTCGATAGCCTCCTTAGCTCCCGCCCTTCTCCTTCTCCCACTGTTCCAACCCCAGGTACAACTCCAACTCCAC
CGGTCGTATCAGATATTGAGAAGAAAAACTTGAAAGACCTTGAAAACGGTTACTTGCAAATCTTAGAGAAAGAACCAGAC
AATCCAGATGCTTTGCGCGGTTTGGCCGAAGCCCGGAGTCAAATGATTAAAATCGGTCTAAAAACCGAAAAAGATCTGCT
GGACCCTTTAGAAAAACTGGTTGAGCTGAATCCAGAACAGACTCAATACCAAGTACTTCTCGCCCAAACCCTGCAAAAAA
CGGGTAAACGGGAAAGCGCGGCTCAAACCTATCGGAGTATTCTAGCCACTGAACCTGGCAATATGGATGCCCTCCAAGGA
TTTGTCAATCTATTGGTCGAACAGCAAAGACCCTCCGCTGCCACCGAACTCCTACAGACAACCCTTAAAAATGCTCCTCA
AGCCAATCAGGTAAAGCCCAACAGTATTAATGAAAGTGCAGTCCAACTCCTACTCGGGCAAGTCTATGCCACCCAAAGGC
AATTCGATCAAGCCGTTGGCGTCTACGACAAACTTATTGCTAAAGATCCTAACGATTTTCGCCCAGTTTTTGCCAAAGCA
ATCCTTTTAAGGGAACAAGGGAAAACCAAAGAAGCTGATATCCTCTTTAACTCAGCCGAAAAATTAGCCCCTGGCCAATA
TAAAGATCAAATAAAAGCTGCGGCCCAAAAGCCGAATGAAACACCTGAAGCTTCTCCCAGTTCCCAGTCTCCTAGCGCCA
GTCCCCAACCCTCTCCCAGTTCAACACCAGGGACCCCTGAATAG

Upstream 100 bases:

>100_bases
TCTTTAGAGTCGGCCTTTCTGCTCCGAAACTTCGTACTTTGAGATAAGCTGCATTACGGGCACTATCCCTGATAATAACT
AGAGAGTTCAACCCCTTCCC

Downstream 100 bases:

>100_bases
ACCTAAAAATTTCCCTAGCAACAGAGCGTTACTAGGGAAAATGCAATATTCAGTTGTATTTACCCCGCAATAGCAAAGGA
ATGTCCGCAGCTACAGGTCT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain Protein

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MQKKSNRWFIWVFVVVAVVALVGFSFGSIFDSLLSSRPSPSPTVPTPGTTPTPPVVSDIEKKNLKDLENGYLQILEKEPD
NPDALRGLAEARSQMIKIGLKTEKDLLDPLEKLVELNPEQTQYQVLLAQTLQKTGKRESAAQTYRSILATEPGNMDALQG
FVNLLVEQQRPSAATELLQTTLKNAPQANQVKPNSINESAVQLLLGQVYATQRQFDQAVGVYDKLIAKDPNDFRPVFAKA
ILLREQGKTKEADILFNSAEKLAPGQYKDQIKAAAQKPNETPEASPSSQSPSASPQPSPSSTPGTPE

Sequences:

>Translated_307_residues
MQKKSNRWFIWVFVVVAVVALVGFSFGSIFDSLLSSRPSPSPTVPTPGTTPTPPVVSDIEKKNLKDLENGYLQILEKEPD
NPDALRGLAEARSQMIKIGLKTEKDLLDPLEKLVELNPEQTQYQVLLAQTLQKTGKRESAAQTYRSILATEPGNMDALQG
FVNLLVEQQRPSAATELLQTTLKNAPQANQVKPNSINESAVQLLLGQVYATQRQFDQAVGVYDKLIAKDPNDFRPVFAKA
ILLREQGKTKEADILFNSAEKLAPGQYKDQIKAAAQKPNETPEASPSSQSPSASPQPSPSSTPGTPE
>Mature_307_residues
MQKKSNRWFIWVFVVVAVVALVGFSFGSIFDSLLSSRPSPSPTVPTPGTTPTPPVVSDIEKKNLKDLENGYLQILEKEPD
NPDALRGLAEARSQMIKIGLKTEKDLLDPLEKLVELNPEQTQYQVLLAQTLQKTGKRESAAQTYRSILATEPGNMDALQG
FVNLLVEQQRPSAATELLQTTLKNAPQANQVKPNSINESAVQLLLGQVYATQRQFDQAVGVYDKLIAKDPNDFRPVFAKA
ILLREQGKTKEADILFNSAEKLAPGQYKDQIKAAAQKPNETPEASPSSQSPSASPQPSPSSTPGTPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33548; Mature: 33548

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKSNRWFIWVFVVVAVVALVGFSFGSIFDSLLSSRPSPSPTVPTPGTTPTPPVVSDIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
KKNLKDLENGYLQILEKEPDNPDALRGLAEARSQMIKIGLKTEKDLLDPLEKLVELNPEQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
TQYQVLLAQTLQKTGKRESAAQTYRSILATEPGNMDALQGFVNLLVEQQRPSAATELLQT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
TLKNAPQANQVKPNSINESAVQLLLGQVYATQRQFDQAVGVYDKLIAKDPNDFRPVFAKA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ILLREQGKTKEADILFNSAEKLAPGQYKDQIKAAAQKPNETPEASPSSQSPSASPQPSPS
HHHHHCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
STPGTPE
CCCCCCC
>Mature Secondary Structure
MQKKSNRWFIWVFVVVAVVALVGFSFGSIFDSLLSSRPSPSPTVPTPGTTPTPPVVSDIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
KKNLKDLENGYLQILEKEPDNPDALRGLAEARSQMIKIGLKTEKDLLDPLEKLVELNPEQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
TQYQVLLAQTLQKTGKRESAAQTYRSILATEPGNMDALQGFVNLLVEQQRPSAATELLQT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
TLKNAPQANQVKPNSINESAVQLLLGQVYATQRQFDQAVGVYDKLIAKDPNDFRPVFAKA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ILLREQGKTKEADILFNSAEKLAPGQYKDQIKAAAQKPNETPEASPSSQSPSASPQPSPS
HHHHHCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
STPGTPE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA