BacMap

Definition	Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession	NC_009925
Length	6,503,724

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The map label for this gene is dnaJ2 [H]

Identifier: 158338782

GI number: 158338782

Start: 5762184

End: 5763128

Strand: Direct

Name: dnaJ2 [H]

Synonym: AM1_5693

Alternate gene names: 158338782

Gene position: 5762184-5763128 (Clockwise)

Preceding gene: 158338781

Following gene: 158338784

Centisome position: 88.6

GC content: 49.52

Gene sequence:

>945_bases
ATGCAGAACTTCCGCAATTACTACGACATTCTTAAGGTGTCTAAAGAGGCATCCACGGAAGAGATTAAGCGTTCCTATCG
AAAATTAGCCCGGCAATATCATCCCGATTTGAACCCGGGCGATAAAGCGGCGGAAGAGCAGTTCAAAACCATCAGTGAAG
CCTACGATGTCTTGTCGGATGTCGAAAAGCGTTCTAAGTACGATCAGTTTGGCCAATATTGGCAGCAACAAGGATTTCAA
AAATCGAGCAGTCCCCAATCCACGAAGAAATGGGGGGGACAAACCAATCCCTTTGTCTCTGATAAGGTGGATTTTAGTGA
ATTTGCAGATTTCCAAGAGTTTTTAGATCAGCTCTTAGAGCGGCCCTATGGCAAGAAGAGCAATGCTCGTAAGCAAACGA
GGAAGAAGCCGAAATCGTCCTCGGTGGGTCAGCGAGATGCCGAAGCTCGCCTGACTCTGCCCTTGGAAAAGGCTTATGCC
GGGGGCCGAGAGCGTATTCGCCTAGAAGATGGACGGTCCTTAGAAGTGTCGATGCCCATGGGGATGGTGTCGGGCCAGCG
CATTCGTCTGAAGGGGCAGGGAACTTCCGGCGGTGACCTTTATCTCAAAATTGATGTTTCGCCCCATGCCTTCTATCGCT
TAGAAGGGAACGATATTATTTGCGAACTACCGATTACCTGTGCAGAAGCCATCCTGGGGGGACAAATCGAAGCCCCCACC
TTAGACGGATGGGTGAAGGTGACCATTCCTAGTGGGGTTCGTTCTGGCCAGCGGCTACGGCTGGGGGGGAAAGGATACCC
GGCTTCAAATGGAAAGCGAGGCGATCAATTAGTTGAGATTCGCATTGAATCGCCTAAAAATATTAGTCCTAGAGAGCGGG
AACTCTACGAACAAATCCGCCAAATTGAAACCTATAAACCACGGGCAAATTTACCGATTATGTGA

Upstream 100 bases:

>100_bases
AGTCGAATGGATGGTGACTTCTGGGAAGACTGGGATGATGATGATTGGTAAACTCAACGGTATCGTTGCAAATTTGGCGA
ACTAGGCTAACAAGAGGTAG

Downstream 100 bases:

>100_bases
ACTATCTTGATCGGCAGGTATTTTAGCAGCGGCTTTAAGATGGCACCCTTAAATTAGGCTGATGTTGAAGAGCTGCTTTA
TTCCTAGCTTTTAAGGGTCT

Product: DnaJ-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MQNFRNYYDILKVSKEASTEEIKRSYRKLARQYHPDLNPGDKAAEEQFKTISEAYDVLSDVEKRSKYDQFGQYWQQQGFQ
KSSSPQSTKKWGGQTNPFVSDKVDFSEFADFQEFLDQLLERPYGKKSNARKQTRKKPKSSSVGQRDAEARLTLPLEKAYA
GGRERIRLEDGRSLEVSMPMGMVSGQRIRLKGQGTSGGDLYLKIDVSPHAFYRLEGNDIICELPITCAEAILGGQIEAPT
LDGWVKVTIPSGVRSGQRLRLGGKGYPASNGKRGDQLVEIRIESPKNISPRERELYEQIRQIETYKPRANLPIM

Sequences:

>Translated_314_residues
MQNFRNYYDILKVSKEASTEEIKRSYRKLARQYHPDLNPGDKAAEEQFKTISEAYDVLSDVEKRSKYDQFGQYWQQQGFQ
KSSSPQSTKKWGGQTNPFVSDKVDFSEFADFQEFLDQLLERPYGKKSNARKQTRKKPKSSSVGQRDAEARLTLPLEKAYA
GGRERIRLEDGRSLEVSMPMGMVSGQRIRLKGQGTSGGDLYLKIDVSPHAFYRLEGNDIICELPITCAEAILGGQIEAPT
LDGWVKVTIPSGVRSGQRLRLGGKGYPASNGKRGDQLVEIRIESPKNISPRERELYEQIRQIETYKPRANLPIM
>Mature_314_residues
MQNFRNYYDILKVSKEASTEEIKRSYRKLARQYHPDLNPGDKAAEEQFKTISEAYDVLSDVEKRSKYDQFGQYWQQQGFQ
KSSSPQSTKKWGGQTNPFVSDKVDFSEFADFQEFLDQLLERPYGKKSNARKQTRKKPKSSSVGQRDAEARLTLPLEKAYA
GGRERIRLEDGRSLEVSMPMGMVSGQRIRLKGQGTSGGDLYLKIDVSPHAFYRLEGNDIICELPITCAEAILGGQIEAPT
LDGWVKVTIPSGVRSGQRLRLGGKGYPASNGKRGDQLVEIRIESPKNISPRERELYEQIRQIETYKPRANLPIM

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360840, Length=351, Percent_Identity=29.9145299145299, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI205360838, Length=351, Percent_Identity=29.9145299145299, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI5453690, Length=346, Percent_Identity=28.3236994219653, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI201862518, Length=349, Percent_Identity=28.080229226361, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI56549115, Length=349, Percent_Identity=28.080229226361, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI6631085, Length=328, Percent_Identity=28.9634146341463, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI201862587, Length=349, Percent_Identity=28.080229226361, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI7706495, Length=308, Percent_Identity=28.5714285714286, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI39204547, Length=321, Percent_Identity=27.1028037383178, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=56.25, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI23503241, Length=75, Percent_Identity=54.6666666666667, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI47777312, Length=68, Percent_Identity=52.9411764705882, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194328758, Length=66, Percent_Identity=60.6060606060606, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI194328760, Length=66, Percent_Identity=60.6060606060606, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27151736, Length=122, Percent_Identity=40.1639344262295, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=53.030303030303, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI88501736, Length=122, Percent_Identity=40.1639344262295, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=53.030303030303, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI4504511, Length=67, Percent_Identity=53.7313432835821, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI194306642, Length=73, Percent_Identity=52.0547945205479, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI194306640, Length=73, Percent_Identity=52.0547945205479, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI22749377, Length=73, Percent_Identity=50.6849315068493, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI56687498, Length=64, Percent_Identity=54.6875, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI5031741, Length=65, Percent_Identity=55.3846153846154, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI21553335, Length=137, Percent_Identity=34.3065693430657, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI72534740, Length=80, Percent_Identity=46.25, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI9558755, Length=68, Percent_Identity=48.5294117647059, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI24308127, Length=68, Percent_Identity=44.1176470588235, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI68077168, Length=77, Percent_Identity=46.7532467532467, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI68077166, Length=77, Percent_Identity=46.7532467532467, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786197, Length=347, Percent_Identity=31.9884726224784, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787235, Length=315, Percent_Identity=31.4285714285714, Blast_Score=148, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17534355, Length=338, Percent_Identity=29.8816568047337, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI212645553, Length=339, Percent_Identity=29.2035398230088, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17554644, Length=75, Percent_Identity=52, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17553096, Length=125, Percent_Identity=28.8, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17553098, Length=125, Percent_Identity=28.8, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=55.5555555555556, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17538236, Length=101, Percent_Identity=38.6138613861386, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115532378, Length=82, Percent_Identity=41.4634146341463, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532476, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=360, Percent_Identity=28.6111111111111, Blast_Score=113, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6323870, Length=67, Percent_Identity=52.2388059701493, Blast_Score=80, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6322194, Length=89, Percent_Identity=48.314606741573, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320888, Length=101, Percent_Identity=43.5643564356436, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6323813, Length=66, Percent_Identity=53.030303030303, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324252, Length=71, Percent_Identity=43.6619718309859, Blast_Score=66, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323119, Length=67, Percent_Identity=47.7611940298507, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85726398, Length=355, Percent_Identity=26.1971830985915, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI19920464, Length=320, Percent_Identity=27.8125, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24658562, Length=336, Percent_Identity=25.297619047619, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24658555, Length=336, Percent_Identity=25.297619047619, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI18858081, Length=340, Percent_Identity=26.7647058823529, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI20129487, Length=78, Percent_Identity=53.8461538461538, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24584014, Length=78, Percent_Identity=53.8461538461538, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24646562, Length=72, Percent_Identity=51.3888888888889, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646560, Length=72, Percent_Identity=51.3888888888889, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646558, Length=72, Percent_Identity=51.3888888888889, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646556, Length=72, Percent_Identity=51.3888888888889, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21357547, Length=72, Percent_Identity=51.3888888888889, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45552811, Length=76, Percent_Identity=46.0526315789474, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI45552813, Length=76, Percent_Identity=46.0526315789474, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45549272, Length=76, Percent_Identity=46.0526315789474, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654066, Length=68, Percent_Identity=50, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24654070, Length=68, Percent_Identity=50, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24654068, Length=68, Percent_Identity=50, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24654072, Length=68, Percent_Identity=50, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI18859921, Length=66, Percent_Identity=51.5151515151515, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24668523, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17737735, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574723, Length=64, Percent_Identity=46.875, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24668492, Length=84, Percent_Identity=41.6666666666667, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=51.5625, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21358273, Length=73, Percent_Identity=47.945205479452, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24651439, Length=88, Percent_Identity=39.7727272727273, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24651436, Length=77, Percent_Identity=41.5584415584416, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI21358311, Length=88, Percent_Identity=39.7727272727273, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 35711; Mature: 35711

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFRNYYDILKVSKEASTEEIKRSYRKLARQYHPDLNPGDKAAEEQFKTISEAYDVLSD
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VEKRSKYDQFGQYWQQQGFQKSSSPQSTKKWGGQTNPFVSDKVDFSEFADFQEFLDQLLE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RPYGKKSNARKQTRKKPKSSSVGQRDAEARLTLPLEKAYAGGRERIRLEDGRSLEVSMPM
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHCCCCCEEEECCCCEEEEECCC
GMVSGQRIRLKGQGTSGGDLYLKIDVSPHAFYRLEGNDIICELPITCAEAILGGQIEAPT
CCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECCCEEEEECCHHHHHHHHCCCCCCCC
LDGWVKVTIPSGVRSGQRLRLGGKGYPASNGKRGDQLVEIRIESPKNISPRERELYEQIR
CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
QIETYKPRANLPIM
HHHHCCCCCCCCCC
>Mature Secondary Structure
MQNFRNYYDILKVSKEASTEEIKRSYRKLARQYHPDLNPGDKAAEEQFKTISEAYDVLSD
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VEKRSKYDQFGQYWQQQGFQKSSSPQSTKKWGGQTNPFVSDKVDFSEFADFQEFLDQLLE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RPYGKKSNARKQTRKKPKSSSVGQRDAEARLTLPLEKAYAGGRERIRLEDGRSLEVSMPM
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHCCCCCEEEECCCCEEEEECCC
GMVSGQRIRLKGQGTSGGDLYLKIDVSPHAFYRLEGNDIICELPITCAEAILGGQIEAPT
CCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECCCEEEEECCHHHHHHHHCCCCCCCC
LDGWVKVTIPSGVRSGQRLRLGGKGYPASNGKRGDQLVEIRIESPKNISPRERELYEQIR
CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
QIETYKPRANLPIM
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]