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The map label for this gene is perM [C]

Identifier: 158338720

GI number: 158338720

Start: 5689290

End: 5690447

Strand: Reverse

Name: perM [C]

Synonym: AM1_5628

Alternate gene names: 158338720

Gene position: 5690447-5689290 (Counterclockwise)

Preceding gene: 158338721

Following gene: 158338718

Centisome position: 87.5

GC content: 47.32

Gene sequence:

>1158_bases
ATGGATAAACCCAATTACTTTCATTGGTGGCAGAAGTTATCTGTTCCCTCTCGCCTACTGATGATCGGCTTAGCCGCACC
AATTTTAGCCCTCAATTTTTGGACCTTAGCTTCGATTTCCAATTACTTTGGGGTGTTGATCGGAATTATTGTGATAGCGT
CACTTCTGGCATTTCTCCTTAACTATCCAGTGAGTTGGTGTGTCCAGCGAGGACTGCGACGAGAGCCTGCATCGATTATT
GTGGCGCTATTAGCCATTTCCATTCTGTTTGGCATCGGCATTATTCTGATTCCGATCGCATTTAATCAGGCCCAACAATT
GGCCAACCGCTTACCCGACTGGTTGGAATCAGGCCGACAGCAGCTAATCCTTCTCAGTCAGCAGGTAGAGGAACGAGGGG
TCTCCCTCAATCTGGATGTCTTGGCAGTTCAAGCCTTTGATCGGCTCCAGGGTCAACTCCAAGCTTTAACCAAAAGTCTG
CTCAATATCGCATTGGGAACGGTTAGCAGTGTTTTAGATATTCTGATCGATGTCCTTGTAACGATAATTCTGACCTTTTA
TCTCCTCCAACATGGGGATGAACTCTGGGACAGTTTGATTGATTGGCTGCCAGAAGAAAGTCAACAGCCTGTGTCCGAAA
CCCTTCGATCTAGCTTCCAGAATTACTTTATTGGTCAGCTGCTGTTTGGTATCTGCATGACTTCTGTTCTCGTACCCACC
TTTTTAATCCTGAAAGTACCCTTTGGCCTACTGTTCGGCCTCACTATTGGTACAATGGCGCTTATCCCGTTTGGCGGGAC
TGTCGGTATTATTCTGGTAACGTGCTTGGTCACCCTACAAAATATTTGGCTGGGCCTCAAACTATTAGCTGCAGCTGTAG
TGGTTCAGCAAATTTTAGACAACTTAGTTGCCCCCAGAATTCTAGGCACCATGACGGGGCTCAATCCAGCATGGGTATTT
ATTTCAATTCTGATCGGGGCTAAGGCCGGCGGGCTGATCGGGGTTGTGATTGCTGTCCCTACGGCTGTAGTAATTAAAAC
GGCGTTGATCAGTTTGCGATTGCGGATGGTATCACCCGATTCAGCAGCCACCCCAGATATTCCTGTGGTCTCCGTAGAAT
CAGAAACCAAAGCCCAGCCAGTATCCCGTATCTCTTAA

Upstream 100 bases:

>100_bases
CAGCTTGACGACAGGGACCTCGTGGTTGACAATCACCTGGAAGGTTGGCTTAGATTATTCTTCCCTTGCTGTAAGTATTC
CTCTGTGCAGGAGAGTAGGC

Downstream 100 bases:

>100_bases
ACCTCAGATCTTTTTTTCGAACCGTTCTGAACTCTCTCTACAAAAACGGTATCCAATCCCATACCCATTGGAAGGATTTC
AGGAACGGCATCTTATGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MDKPNYFHWWQKLSVPSRLLMIGLAAPILALNFWTLASISNYFGVLIGIIVIASLLAFLLNYPVSWCVQRGLRREPASII
VALLAISILFGIGIILIPIAFNQAQQLANRLPDWLESGRQQLILLSQQVEERGVSLNLDVLAVQAFDRLQGQLQALTKSL
LNIALGTVSSVLDILIDVLVTIILTFYLLQHGDELWDSLIDWLPEESQQPVSETLRSSFQNYFIGQLLFGICMTSVLVPT
FLILKVPFGLLFGLTIGTMALIPFGGTVGIILVTCLVTLQNIWLGLKLLAAAVVVQQILDNLVAPRILGTMTGLNPAWVF
ISILIGAKAGGLIGVVIAVPTAVVIKTALISLRLRMVSPDSAATPDIPVVSVESETKAQPVSRIS

Sequences:

>Translated_385_residues
MDKPNYFHWWQKLSVPSRLLMIGLAAPILALNFWTLASISNYFGVLIGIIVIASLLAFLLNYPVSWCVQRGLRREPASII
VALLAISILFGIGIILIPIAFNQAQQLANRLPDWLESGRQQLILLSQQVEERGVSLNLDVLAVQAFDRLQGQLQALTKSL
LNIALGTVSSVLDILIDVLVTIILTFYLLQHGDELWDSLIDWLPEESQQPVSETLRSSFQNYFIGQLLFGICMTSVLVPT
FLILKVPFGLLFGLTIGTMALIPFGGTVGIILVTCLVTLQNIWLGLKLLAAAVVVQQILDNLVAPRILGTMTGLNPAWVF
ISILIGAKAGGLIGVVIAVPTAVVIKTALISLRLRMVSPDSAATPDIPVVSVESETKAQPVSRIS
>Mature_385_residues
MDKPNYFHWWQKLSVPSRLLMIGLAAPILALNFWTLASISNYFGVLIGIIVIASLLAFLLNYPVSWCVQRGLRREPASII
VALLAISILFGIGIILIPIAFNQAQQLANRLPDWLESGRQQLILLSQQVEERGVSLNLDVLAVQAFDRLQGQLQALTKSL
LNIALGTVSSVLDILIDVLVTIILTFYLLQHGDELWDSLIDWLPEESQQPVSETLRSSFQNYFIGQLLFGICMTSVLVPT
FLILKVPFGLLFGLTIGTMALIPFGGTVGIILVTCLVTLQNIWLGLKLLAAAVVVQQILDNLVAPRILGTMTGLNPAWVF
ISILIGAKAGGLIGVVIAVPTAVVIKTALISLRLRMVSPDSAATPDIPVVSVESETKAQPVSRIS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=313, Percent_Identity=22.3642172523962, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41876; Mature: 41876

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPNYFHWWQKLSVPSRLLMIGLAAPILALNFWTLASISNYFGVLIGIIVIASLLAFLL
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYPVSWCVQRGLRREPASIIVALLAISILFGIGIILIPIAFNQAQQLANRLPDWLESGRQ
HCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH
QLILLSQQVEERGVSLNLDVLAVQAFDRLQGQLQALTKSLLNIALGTVSSVLDILIDVLV
HHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIILTFYLLQHGDELWDSLIDWLPEESQQPVSETLRSSFQNYFIGQLLFGICMTSVLVPT
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLILKVPFGLLFGLTIGTMALIPFGGTVGIILVTCLVTLQNIWLGLKLLAAAVVVQQILD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLVAPRILGTMTGLNPAWVFISILIGAKAGGLIGVVIAVPTAVVIKTALISLRLRMVSPD
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SAATPDIPVVSVESETKAQPVSRIS
CCCCCCCCEEEECCHHHCCCHHCCC
>Mature Secondary Structure
MDKPNYFHWWQKLSVPSRLLMIGLAAPILALNFWTLASISNYFGVLIGIIVIASLLAFLL
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYPVSWCVQRGLRREPASIIVALLAISILFGIGIILIPIAFNQAQQLANRLPDWLESGRQ
HCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH
QLILLSQQVEERGVSLNLDVLAVQAFDRLQGQLQALTKSLLNIALGTVSSVLDILIDVLV
HHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIILTFYLLQHGDELWDSLIDWLPEESQQPVSETLRSSFQNYFIGQLLFGICMTSVLVPT
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLILKVPFGLLFGLTIGTMALIPFGGTVGIILVTCLVTLQNIWLGLKLLAAAVVVQQILD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLVAPRILGTMTGLNPAWVFISILIGAKAGGLIGVVIAVPTAVVIKTALISLRLRMVSPD
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SAATPDIPVVSVESETKAQPVSRIS
CCCCCCCCEEEECCHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]