Click here to switch to the map view.

The map label for this gene is 158338709

Identifier: 158338709

GI number: 158338709

Start: 5676742

End: 5677866

Strand: Direct

Name: 158338709

Synonym: AM1_5617

Alternate gene names: NA

Gene position: 5676742-5677866 (Clockwise)

Preceding gene: 158338708

Following gene: 158338710

Centisome position: 87.28

GC content: 48.8

Gene sequence:

>1125_bases
ATGAAATTTATCCATCCACTCGCTCCGATTATTGTCACTGCAATGATTGCTGCTCCCTTTCAGAGTGCCCAGGCATTGAG
TTCAGCGGAAGTGAGTGAGATCGCAGAAGCCATCACCGTCCGGATCGATGGTCAAAATTCTGGTTCGGGAGTGATTATCA
AGCGCCAGAATGACGTTTATACAGTGCTGACTGCGGCCCATGTGGTAGCTACAGCGGATGAATATGATGTGGTGACAGCT
GACGACTTACGATATCCATTGACCTATAGCAAGGTTAAAAAATTTCCTGGGATTGATTTGGCATTGGTTGAATTTACCAG
TTCAAAATCCTATCAGGTGGCAAAACTGGGTGACTCGTCGAATGTACGAGCCGGAGAGTCCATTTATGTCTCTGGATTCC
CCATGCCCACAGCTGCTATCACTGAGCCCATTTGGAATTTTTCTGAGGGGAAAGTGACGGCGAATGCCAAGCGCCCTTTG
GCCGATGGCTATGGATTGGTTTATAGCAATAACACCTTGCCGGGGATGAGTGGTGGATCTGTTTTAGATCGCCAAGGCCA
ACTGATTGGGATTCATGGTCGGGCAGACGGGGAAAGGCAAGTTAAACGAACGGAAACGGTGTATGTGAAGACCGGCTTTA
ATTTGGGCATTCCCATCAATACTTTTTTAAGTTCGGTGGGCACGGTTCATCCGGCTTTGGGATTCTCTGGAACAGTGGCA
ACAGGTGGCGCTGAATTGACCCCGGATGATCTTTATGTGCAGGGGACCGATAAATTCCAGCGGGGAAACTACCAGGGTGC
GATCGCAGATCTAAACCAATCCATTGATCTCAATCCCCAGAACGCCTTTGCCTACAACAGTCGCGGCAATGCCTACTACG
AATTGCAGCAATACGAAGATGCGATCGCTCAGTACGACCAAGCCATTGCTCTTAACCCTGACTATGCCGAAGCTTATTTC
AATCGAGGGCTTGCCCATCAGCTCATGGGGAATAACGCTCAAGCCCAGCAAGATCATCTGAAATCAAAGCAGCTCTTAGG
GGGGCAGGTCGACTCACTGCAAAATAAAGCCGATCGCATTCAGCAATTGTTAGATCAGAAACTCAAACCCTTTGAGCGGC
GATAG

Upstream 100 bases:

>100_bases
GTCTGAAAGGATTACTCTTAACTTAATAAAAAGGTGTGATCCTTAATACAAATGTGCTAGGGAATAGGATAAGTTTCTAG
TTTTTCCAGAATTGTCATCC

Downstream 100 bases:

>100_bases
TTTTTGCAAGTTGCTTCCTATTCATAAAGAAACAGAGGGTCTTTAAAACCAGGGGCTATCCTAGAAAAGATAATCAAGTG
AATTCAAAAGTTCACGCTAT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKFIHPLAPIIVTAMIAAPFQSAQALSSAEVSEIAEAITVRIDGQNSGSGVIIKRQNDVYTVLTAAHVVATADEYDVVTA
DDLRYPLTYSKVKKFPGIDLALVEFTSSKSYQVAKLGDSSNVRAGESIYVSGFPMPTAAITEPIWNFSEGKVTANAKRPL
ADGYGLVYSNNTLPGMSGGSVLDRQGQLIGIHGRADGERQVKRTETVYVKTGFNLGIPINTFLSSVGTVHPALGFSGTVA
TGGAELTPDDLYVQGTDKFQRGNYQGAIADLNQSIDLNPQNAFAYNSRGNAYYELQQYEDAIAQYDQAIALNPDYAEAYF
NRGLAHQLMGNNAQAQQDHLKSKQLLGGQVDSLQNKADRIQQLLDQKLKPFERR

Sequences:

>Translated_374_residues
MKFIHPLAPIIVTAMIAAPFQSAQALSSAEVSEIAEAITVRIDGQNSGSGVIIKRQNDVYTVLTAAHVVATADEYDVVTA
DDLRYPLTYSKVKKFPGIDLALVEFTSSKSYQVAKLGDSSNVRAGESIYVSGFPMPTAAITEPIWNFSEGKVTANAKRPL
ADGYGLVYSNNTLPGMSGGSVLDRQGQLIGIHGRADGERQVKRTETVYVKTGFNLGIPINTFLSSVGTVHPALGFSGTVA
TGGAELTPDDLYVQGTDKFQRGNYQGAIADLNQSIDLNPQNAFAYNSRGNAYYELQQYEDAIAQYDQAIALNPDYAEAYF
NRGLAHQLMGNNAQAQQDHLKSKQLLGGQVDSLQNKADRIQQLLDQKLKPFERR
>Mature_374_residues
MKFIHPLAPIIVTAMIAAPFQSAQALSSAEVSEIAEAITVRIDGQNSGSGVIIKRQNDVYTVLTAAHVVATADEYDVVTA
DDLRYPLTYSKVKKFPGIDLALVEFTSSKSYQVAKLGDSSNVRAGESIYVSGFPMPTAAITEPIWNFSEGKVTANAKRPL
ADGYGLVYSNNTLPGMSGGSVLDRQGQLIGIHGRADGERQVKRTETVYVKTGFNLGIPINTFLSSVGTVHPALGFSGTVA
TGGAELTPDDLYVQGTDKFQRGNYQGAIADLNQSIDLNPQNAFAYNSRGNAYYELQQYEDAIAQYDQAIALNPDYAEAYF
NRGLAHQLMGNNAQAQQDHLKSKQLLGGQVDSLQNKADRIQQLLDQKLKPFERR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 40550; Mature: 40550

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIHPLAPIIVTAMIAAPFQSAQALSSAEVSEIAEAITVRIDGQNSGSGVIIKRQNDVY
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCEE
TVLTAAHVVATADEYDVVTADDLRYPLTYSKVKKFPGIDLALVEFTSSKSYQVAKLGDSS
EEEEHHHHHEECCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCC
NVRAGESIYVSGFPMPTAAITEPIWNFSEGKVTANAKRPLADGYGLVYSNNTLPGMSGGS
CCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCC
VLDRQGQLIGIHGRADGERQVKRTETVYVKTGFNLGIPINTFLSSVGTVHPALGFSGTVA
EECCCCCEEEEECCCCCHHHHEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEE
TGGAELTPDDLYVQGTDKFQRGNYQGAIADLNQSIDLNPQNAFAYNSRGNAYYELQQYED
CCCCCCCCCCEEEECCCHHHCCCCCEEHHHCCCCCCCCCCCCEEECCCCCEEEEHHHHHH
AIAQYDQAIALNPDYAEAYFNRGLAHQLMGNNAQAQQDHLKSKQLLGGQVDSLQNKADRI
HHHHCCCEEECCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
QQLLDQKLKPFERR
HHHHHHHCCCCCCC
>Mature Secondary Structure
MKFIHPLAPIIVTAMIAAPFQSAQALSSAEVSEIAEAITVRIDGQNSGSGVIIKRQNDVY
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCEE
TVLTAAHVVATADEYDVVTADDLRYPLTYSKVKKFPGIDLALVEFTSSKSYQVAKLGDSS
EEEEHHHHHEECCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCC
NVRAGESIYVSGFPMPTAAITEPIWNFSEGKVTANAKRPLADGYGLVYSNNTLPGMSGGS
CCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCC
VLDRQGQLIGIHGRADGERQVKRTETVYVKTGFNLGIPINTFLSSVGTVHPALGFSGTVA
EECCCCCEEEEECCCCCHHHHEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEE
TGGAELTPDDLYVQGTDKFQRGNYQGAIADLNQSIDLNPQNAFAYNSRGNAYYELQQYED
CCCCCCCCCCEEEECCCHHHCCCCCEEHHHCCCCCCCCCCCCEEECCCCCEEEEHHHHHH
AIAQYDQAIALNPDYAEAYFNRGLAHQLMGNNAQAQQDHLKSKQLLGGQVDSLQNKADRI
HHHHCCCEEECCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
QQLLDQKLKPFERR
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]