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The map label for this gene is 158338675

Identifier: 158338675

GI number: 158338675

Start: 5641403

End: 5642323

Strand: Direct

Name: 158338675

Synonym: AM1_5582

Alternate gene names: NA

Gene position: 5641403-5642323 (Clockwise)

Preceding gene: 158338673

Following gene: 158338676

Centisome position: 86.74

GC content: 44.19

Gene sequence:

>921_bases
ATGCCTGAACAGTTCTCTCAAAATAATTCTGGTGGAACTAAAAGAGAGTCTTCTGCCAAATCTCAGTTGGTTTCTTTAAA
GGCAAAATCTACTGATAGTCAGTCGGGTGATGCTCCTGGAAAAAGAGAATGGTGGGCACAACGTTGGGTTGATGTGTTGG
AATCTTTTGGTTGGCGTCGCAGACTAGAACGAGCTCGTAACTATGTTCGTGAAGGACGGGTACTAAAGTTAGAGTTCAAT
GGCCCTAAGGTAGTTGCAAGGGTTCAAGGAACTGCGGAAGATCCTTATAAAGTCTCTTTGGCTCTTGACTCATTTACAGA
TGAACAGTGGGGCTTTGTGATTGAGGAGATGTCTCAGCGGGCTATCTTTGCGGCGAAACTTTTGGCTGGTGAGATGCCTC
AAAATATTGAAGAAGCCTTTACTGCGAGTGGTCTTAGTTTATTCCCATTTAGTAAGTTTGATATCCACAGCCGTTGTTCC
TGTCCTGATCCCGTTAACCCTTGCAAGCATATTGGTGCTGTGTACTACTTACTGGGAGATTATTTCAGTCAAGATCCCTT
TATTCTATTACAGCTTCGAGGACGGACTAAGCAGAGCATCGTAGAAGACTTAAGACAAATGCGGAGTGCAGGATCAGACC
TTGAAGAAGGTGAATTAAAAAGCTCAGATGCTCCCCAATCCTCAGCCATTAAGGTTAAGGCCGATTTTTGGCGATATGAC
CAGCAGCTGGATCCATCTTTGGTTGTAATTACACCACCTCCTACAAGTGAAACAGTTTTGGATGTGTTAGGTCCCTTACC
ATTGTCAACAGAAGGTAAGGTTGGAAGCGATCCTCTGGTTAGTGATTGTTTGCGAACGATTTATCAAAGAGTCAGTCAGA
GTGCCATGATGAAGGCAATGTTGAGTCGGGAGAGTGGGTAA

Upstream 100 bases:

>100_bases
TGCTTCTTTTGTTTGATATTATCTGATATTCATTTCACCTAGTTTTTATCGATATTAAACGGAACCCTGAGGATGCATGA
CTTTAAAGGAGATATACTCT

Downstream 100 bases:

>100_bases
ATGGCGGAGCCAGCCAATGCAAGGCCGAGTTGGTTTGTCCGTAAAGATATTGATGGCTTTTTTGGTTTAGCGATTGATAA
TATTGTTCAAATCCTGTTGA

Product: SWIM zinc finger domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPEQFSQNNSGGTKRESSAKSQLVSLKAKSTDSQSGDAPGKREWWAQRWVDVLESFGWRRRLERARNYVREGRVLKLEFN
GPKVVARVQGTAEDPYKVSLALDSFTDEQWGFVIEEMSQRAIFAAKLLAGEMPQNIEEAFTASGLSLFPFSKFDIHSRCS
CPDPVNPCKHIGAVYYLLGDYFSQDPFILLQLRGRTKQSIVEDLRQMRSAGSDLEEGELKSSDAPQSSAIKVKADFWRYD
QQLDPSLVVITPPPTSETVLDVLGPLPLSTEGKVGSDPLVSDCLRTIYQRVSQSAMMKAMLSRESG

Sequences:

>Translated_306_residues
MPEQFSQNNSGGTKRESSAKSQLVSLKAKSTDSQSGDAPGKREWWAQRWVDVLESFGWRRRLERARNYVREGRVLKLEFN
GPKVVARVQGTAEDPYKVSLALDSFTDEQWGFVIEEMSQRAIFAAKLLAGEMPQNIEEAFTASGLSLFPFSKFDIHSRCS
CPDPVNPCKHIGAVYYLLGDYFSQDPFILLQLRGRTKQSIVEDLRQMRSAGSDLEEGELKSSDAPQSSAIKVKADFWRYD
QQLDPSLVVITPPPTSETVLDVLGPLPLSTEGKVGSDPLVSDCLRTIYQRVSQSAMMKAMLSRESG
>Mature_305_residues
PEQFSQNNSGGTKRESSAKSQLVSLKAKSTDSQSGDAPGKREWWAQRWVDVLESFGWRRRLERARNYVREGRVLKLEFNG
PKVVARVQGTAEDPYKVSLALDSFTDEQWGFVIEEMSQRAIFAAKLLAGEMPQNIEEAFTASGLSLFPFSKFDIHSRCSC
PDPVNPCKHIGAVYYLLGDYFSQDPFILLQLRGRTKQSIVEDLRQMRSAGSDLEEGELKSSDAPQSSAIKVKADFWRYDQ
QLDPSLVVITPPPTSETVLDVLGPLPLSTEGKVGSDPLVSDCLRTIYQRVSQSAMMKAMLSRESG

Specific function: Unknown

COG id: COG4279

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34181; Mature: 34050

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEQFSQNNSGGTKRESSAKSQLVSLKAKSTDSQSGDAPGKREWWAQRWVDVLESFGWRR
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RLERARNYVREGRVLKLEFNGPKVVARVQGTAEDPYKVSLALDSFTDEQWGFVIEEMSQR
HHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
AIFAAKLLAGEMPQNIEEAFTASGLSLFPFSKFDIHSRCSCPDPVNPCKHIGAVYYLLGD
HHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YFSQDPFILLQLRGRTKQSIVEDLRQMRSAGSDLEEGELKSSDAPQSSAIKVKADFWRYD
HHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH
QQLDPSLVVITPPPTSETVLDVLGPLPLSTEGKVGSDPLVSDCLRTIYQRVSQSAMMKAM
CCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSRESG
HHHCCC
>Mature Secondary Structure 
PEQFSQNNSGGTKRESSAKSQLVSLKAKSTDSQSGDAPGKREWWAQRWVDVLESFGWRR
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RLERARNYVREGRVLKLEFNGPKVVARVQGTAEDPYKVSLALDSFTDEQWGFVIEEMSQR
HHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
AIFAAKLLAGEMPQNIEEAFTASGLSLFPFSKFDIHSRCSCPDPVNPCKHIGAVYYLLGD
HHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YFSQDPFILLQLRGRTKQSIVEDLRQMRSAGSDLEEGELKSSDAPQSSAIKVKADFWRYD
HHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH
QQLDPSLVVITPPPTSETVLDVLGPLPLSTEGKVGSDPLVSDCLRTIYQRVSQSAMMKAM
CCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSRESG
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA