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The map label for this gene is psbH [H]

Identifier: 158338608

GI number: 158338608

Start: 5561953

End: 5562168

Strand: Direct

Name: psbH [H]

Synonym: AM1_5512

Alternate gene names: 158338608

Gene position: 5561953-5562168 (Clockwise)

Preceding gene: 158338605

Following gene: 158338609

Centisome position: 85.52

GC content: 46.76

Gene sequence:

>216_bases
ATGCCAAAACAGACCTGGTGGGGAGATGTTCTCAAAGGTAACAATAATTCCGAAGCCGGCAAATTCGTGCCTGGTTGGGG
GACGACTCCAGTAATGGCTGGTTTTGTAGTCATGATTACGTTGTTGTTGCTTATTATGCTTCAAGTTTATAACCACACTA
TCGTCCTTGATGGTGTTGATGCAGGCTGGACCAGCCTCGGTGGTTTCGGCCAATAA

Upstream 100 bases:

>100_bases
TGTTGCAGGGTCAGAAAATTGCATTTTTTTATGAGTATCTTTCCTCTATAATATTACGATAAGTTAAAAAATAGTGTTGT
TTGTTGTGAGCCGATAAGCT

Downstream 100 bases:

>100_bases
GAACATCTTTTAGCATGACGTTTTTCCTGTAGGTGATACCAATTTCTCTTGAAGTTGATATCCCATCTGCCCCGGTCTTC
CGGGGCTTTTTATTGTCGTG

Product: photosystem II reaction center protein H

Products: NA

Alternate protein names: PSII-H [H]

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPKQTWWGDVLKGNNNSEAGKFVPGWGTTPVMAGFVVMITLLLLIMLQVYNHTIVLDGVDAGWTSLGGFGQ

Sequences:

>Translated_71_residues
MPKQTWWGDVLKGNNNSEAGKFVPGWGTTPVMAGFVVMITLLLLIMLQVYNHTIVLDGVDAGWTSLGGFGQ
>Mature_70_residues
PKQTWWGDVLKGNNNSEAGKFVPGWGTTPVMAGFVVMITLLLLIMLQVYNHTIVLDGVDAGWTSLGGFGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:
GO:0009523: Photosystem II 10 kDa phosphoprotein PsbH
GO:0015979: Photosystem II 10 kDa phosphoprotein PsbH
GO:0016020: Photosystem II 10 kDa phosphoprotein PsbH
GO:0042301: Photosystem II 10 kDa phosphoprotein PsbH
GO:0050821: Photosystem II 10 kDa phosphoprotein PsbH

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001056
- ProDom:   PD003584 [H]

Pfam domain/function: PF00737 PsbH [H]

EC number: NA

Molecular weight: Translated: 7680; Mature: 7549

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQTWWGDVLKGNNNSEAGKFVPGWGTTPVMAGFVVMITLLLLIMLQVYNHTIVLDGVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
AGWTSLGGFGQ
CCCCCCCCCCC
>Mature Secondary Structure 
PKQTWWGDVLKGNNNSEAGKFVPGWGTTPVMAGFVVMITLLLLIMLQVYNHTIVLDGVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
AGWTSLGGFGQ
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA