BacMap

Definition	Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession	NC_009925
Length	6,503,724

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The map label for this gene is hflB [C]

Identifier: 158338545

GI number: 158338545

Start: 5504340

End: 5505878

Strand: Reverse

Name: hflB [C]

Synonym: AM1_5447

Alternate gene names: 158338545

Gene position: 5505878-5504340 (Counterclockwise)

Preceding gene: 158338548

Following gene: 158338544

Centisome position: 84.66

GC content: 48.47

Gene sequence:

>1539_bases
ATGCCCTTATCCGTAAGTGTACGAGACATTCAGACCTTAATCCTGTCCTATCACCCCGTCATAGTAATTGAAACTTTAGA
GGAAGAGCGGGTTCAAACCCTTCTTAAGAAAGCGACGGAGGAAATGTCTATTCCGATGTTTGAATGGAGCATTGCTCAGG
GCCTGATTCGGTCTCCTGGCACCTTTAATGCGCCTTGGGTAAATGAATATGCGCCACCTGGCACCCTCAAACCTGCTGCT
ATTGGTAATACTGCCGAACCCTTAGCGGTCCTTAAACATGTCCAGGATATGTCTATTAAGGCATTGTTCTGGCTCAAGGA
TTTCGGCAAACATTTTGAAGATCCAGAAACAGCCCGCCACTTTCGGGAAGCGGCTCAGCTCTTTTCTCAAAAACGGTCTG
CCTTTGTGTTGACCGGAGACAATATTGAGCTACCTAGGGAAATTGAGCATGATGCTGTGGTCTACGACCTGAAGCTGCCC
GATCGCGATGAGCTGTCTCGGACAGTGAAAGAAGTGGTGCGGACTATGAGACATAAACACCGCACCATCGTGGAATTAGA
AGATCAGGATATGCAGGCCCTTGTTCAAGCCATGACGGGTATGACCTTGAAACAAGCCCGACAAGTGCTGGCCTATGCGG
CTTTGGATGATGGCAAATTGACCACAGACGATGTGGAGCGTATTCTCCATCGCAAGGCCCAACTGATCCGAGCGGGTGGG
GTGCTGGATTACCTTCCGGTCGAGGGGAATCGTGTGGAATGGGGTGGGTTTGCGAATCTCAAGAATTGGCTGGGACGAGC
CAAGGTCGGATTTAGTCCCGCCGCTAAAGCTTTGAACCTAACTCCACCGAAGGGAATTTTGATTGTAGGGATTCAAGGAT
GCGGCAAATCTCTTGCAGCTAAAGCGATCGCTAGAGAATGGAAAATGCCATTACTGAAGTTAGATGCAGGTCGTCTCTAC
GATAAATTTGTGGGGGAATCTGAGAAGAACTTTCGCAAAGCCATCTCCTTAGCAGAATCTATGGCTCCTGCCGTTCTCTG
GATTGATGAAATTGAGAAAAGCTTGGGGGCTACAGGGTCTGATTCAGATGGGGGCCTGAGTCGGCGAATGTTTGGGTTCT
TCCTAACCTGGATGCAGGAAAAGTCCCAAGAGGTATTTGTGGTGGCCACTGCCAATGATATTTCCCAAATTCCTCCAGAA
CTGCTGCGAAAAGGCCGTTTTGATGAGATTTTCTATGTGGATTTACCGGATTTGCAAGAACGAGGGGCGATTTTCCGTAT
TCATTTGATGCTGCGTAAGCAAGATCCCAGCCATTTTGATATGCCTACTCTATTGCAGGCATCGGAAGGCTATAGTGGTG
CTGAAATCGAGCAGGCGGTCGTGGCAGCGCTTTATCGCGCGCTCTATGTAGAGAAACCTTTGGATACGGAGTTACTGGTT
CAAGAGATTCAAGGCATGATTCCGTTATCGGTTTCACGACAGGAACATTTGAAGCAGCTTCGCAACCTTGCTCAAGATCG
ATTTATGAGTGCTAGATAA

Upstream 100 bases:

>100_bases
ATCTTGCATTAGTAAGGAGGCTACATAGGCTTGCCTTTAGCAAAATCCTTGTATTCGGGAATCTTGAGAATAATATCCTT
TCCTGGTTGGCGCTCTGGCT

Downstream 100 bases:

>100_bases
CCCTTAAACATTGGTGTGGCCTTCCTTTTTAGGTGGCGCTCGAACCTTTTTGTCTATTGTTTTCGTCAATTTGATTTATG
CATAAAGCCCTTCACTTCTC

Product: AAA ATPase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MPLSVSVRDIQTLILSYHPVIVIETLEEERVQTLLKKATEEMSIPMFEWSIAQGLIRSPGTFNAPWVNEYAPPGTLKPAA
IGNTAEPLAVLKHVQDMSIKALFWLKDFGKHFEDPETARHFREAAQLFSQKRSAFVLTGDNIELPREIEHDAVVYDLKLP
DRDELSRTVKEVVRTMRHKHRTIVELEDQDMQALVQAMTGMTLKQARQVLAYAALDDGKLTTDDVERILHRKAQLIRAGG
VLDYLPVEGNRVEWGGFANLKNWLGRAKVGFSPAAKALNLTPPKGILIVGIQGCGKSLAAKAIAREWKMPLLKLDAGRLY
DKFVGESEKNFRKAISLAESMAPAVLWIDEIEKSLGATGSDSDGGLSRRMFGFFLTWMQEKSQEVFVVATANDISQIPPE
LLRKGRFDEIFYVDLPDLQERGAIFRIHLMLRKQDPSHFDMPTLLQASEGYSGAEIEQAVVAALYRALYVEKPLDTELLV
QEIQGMIPLSVSRQEHLKQLRNLAQDRFMSAR

Sequences:

>Translated_512_residues
MPLSVSVRDIQTLILSYHPVIVIETLEEERVQTLLKKATEEMSIPMFEWSIAQGLIRSPGTFNAPWVNEYAPPGTLKPAA
IGNTAEPLAVLKHVQDMSIKALFWLKDFGKHFEDPETARHFREAAQLFSQKRSAFVLTGDNIELPREIEHDAVVYDLKLP
DRDELSRTVKEVVRTMRHKHRTIVELEDQDMQALVQAMTGMTLKQARQVLAYAALDDGKLTTDDVERILHRKAQLIRAGG
VLDYLPVEGNRVEWGGFANLKNWLGRAKVGFSPAAKALNLTPPKGILIVGIQGCGKSLAAKAIAREWKMPLLKLDAGRLY
DKFVGESEKNFRKAISLAESMAPAVLWIDEIEKSLGATGSDSDGGLSRRMFGFFLTWMQEKSQEVFVVATANDISQIPPE
LLRKGRFDEIFYVDLPDLQERGAIFRIHLMLRKQDPSHFDMPTLLQASEGYSGAEIEQAVVAALYRALYVEKPLDTELLV
QEIQGMIPLSVSRQEHLKQLRNLAQDRFMSAR
>Mature_511_residues
PLSVSVRDIQTLILSYHPVIVIETLEEERVQTLLKKATEEMSIPMFEWSIAQGLIRSPGTFNAPWVNEYAPPGTLKPAAI
GNTAEPLAVLKHVQDMSIKALFWLKDFGKHFEDPETARHFREAAQLFSQKRSAFVLTGDNIELPREIEHDAVVYDLKLPD
RDELSRTVKEVVRTMRHKHRTIVELEDQDMQALVQAMTGMTLKQARQVLAYAALDDGKLTTDDVERILHRKAQLIRAGGV
LDYLPVEGNRVEWGGFANLKNWLGRAKVGFSPAAKALNLTPPKGILIVGIQGCGKSLAAKAIAREWKMPLLKLDAGRLYD
KFVGESEKNFRKAISLAESMAPAVLWIDEIEKSLGATGSDSDGGLSRRMFGFFLTWMQEKSQEVFVVATANDISQIPPEL
LRKGRFDEIFYVDLPDLQERGAIFRIHLMLRKQDPSHFDMPTLLQASEGYSGAEIEQAVVAALYRALYVEKPLDTELLVQ
EIQGMIPLSVSRQEHLKQLRNLAQDRFMSAR

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=184, Percent_Identity=34.7826086956522, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI45643125, Length=204, Percent_Identity=35.2941176470588, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI45643123, Length=204, Percent_Identity=35.2941176470588, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI6005942, Length=195, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI21361144, Length=197, Percent_Identity=31.4720812182741, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI24430151, Length=196, Percent_Identity=30.6122448979592, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI195539395, Length=211, Percent_Identity=28.9099526066351, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI17865802, Length=260, Percent_Identity=30.3846153846154, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI31377644, Length=183, Percent_Identity=31.1475409836066, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI300192933, Length=220, Percent_Identity=30.9090909090909, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI24497618, Length=205, Percent_Identity=30.2439024390244, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI4507173, Length=193, Percent_Identity=33.6787564766839, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI7019569, Length=187, Percent_Identity=32.0855614973262, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI153792536, Length=205, Percent_Identity=30.7317073170732, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI229577436, Length=212, Percent_Identity=31.1320754716981, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI5901990, Length=238, Percent_Identity=30.672268907563, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI89064750, Length=155, Percent_Identity=29.6774193548387, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI24430155, Length=155, Percent_Identity=29.6774193548387, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI5729991, Length=155, Percent_Identity=29.6774193548387, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI24497435, Length=200, Percent_Identity=29.5, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4505725, Length=189, Percent_Identity=30.6878306878307, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI31742536, Length=181, Percent_Identity=34.2541436464088, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI112789543, Length=181, Percent_Identity=34.2541436464088, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI4506209, Length=207, Percent_Identity=29.951690821256, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI21327685, Length=187, Percent_Identity=31.5508021390374, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI7657689, Length=187, Percent_Identity=31.5508021390374, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI14149767, Length=199, Percent_Identity=31.6582914572864, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI62177112, Length=199, Percent_Identity=31.6582914572864, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI194018488, Length=127, Percent_Identity=33.8582677165354, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI226371754, Length=200, Percent_Identity=32.5, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI11875211, Length=179, Percent_Identity=28.4916201117318, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI116292174, Length=188, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI40806170, Length=179, Percent_Identity=28.4916201117318, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI310125282, Length=238, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI310125280, Length=238, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI156564401, Length=238, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI1789568, Length=190, Percent_Identity=34.7368421052632, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17508053, Length=229, Percent_Identity=34.9344978165939, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17532375, Length=198, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17531535, Length=183, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25153574, Length=196, Percent_Identity=31.6326530612245, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193209502, Length=196, Percent_Identity=31.6326530612245, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17508701, Length=197, Percent_Identity=30.9644670050761, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17537217, Length=147, Percent_Identity=36.0544217687075, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17563250, Length=196, Percent_Identity=30.1020408163265, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71987364, Length=201, Percent_Identity=28.8557213930348, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI71987372, Length=201, Percent_Identity=28.8557213930348, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17554264, Length=187, Percent_Identity=31.5508021390374, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI86561515, Length=189, Percent_Identity=33.8624338624339, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71994521, Length=205, Percent_Identity=32.6829268292683, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17554786, Length=200, Percent_Identity=30.5, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17541226, Length=196, Percent_Identity=29.0816326530612, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17541224, Length=196, Percent_Identity=29.0816326530612, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193206116, Length=202, Percent_Identity=28.7128712871287, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193206114, Length=202, Percent_Identity=28.7128712871287, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25144278, Length=198, Percent_Identity=30.8080808080808, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI133931034, Length=202, Percent_Identity=28.7128712871287, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25144281, Length=198, Percent_Identity=30.8080808080808, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17563248, Length=206, Percent_Identity=28.6407766990291, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562804, Length=134, Percent_Identity=34.3283582089552, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17508421, Length=208, Percent_Identity=33.6538461538462, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32563584, Length=185, Percent_Identity=34.5945945945946, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25146157, Length=144, Percent_Identity=34.7222222222222, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560432, Length=184, Percent_Identity=28.804347826087, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17505546, Length=201, Percent_Identity=27.363184079602, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115534323, Length=197, Percent_Identity=28.9340101522843, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17554784, Length=198, Percent_Identity=25.7575757575758, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=183, Percent_Identity=36.0655737704918, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6323429, Length=204, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6322994, Length=196, Percent_Identity=30.1020408163265, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6324833, Length=196, Percent_Identity=29.0816326530612, Blast_Score=90, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6320197, Length=198, Percent_Identity=29.2929292929293, Blast_Score=90, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6322651, Length=235, Percent_Identity=26.3829787234043, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6325431, Length=193, Percent_Identity=32.6424870466321, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320854, Length=210, Percent_Identity=30.4761904761905, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321390, Length=199, Percent_Identity=27.1356783919598, Blast_Score=87, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322704, Length=156, Percent_Identity=32.6923076923077, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6324691, Length=198, Percent_Identity=30.3030303030303, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6321465, Length=181, Percent_Identity=29.8342541436464, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320887, Length=244, Percent_Identity=27.8688524590164, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325281, Length=186, Percent_Identity=30.1075268817204, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321709, Length=235, Percent_Identity=27.6595744680851, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324000, Length=141, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320602, Length=197, Percent_Identity=29.9492385786802, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323736, Length=198, Percent_Identity=31.3131313131313, Blast_Score=80, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6325183, Length=237, Percent_Identity=28.6919831223629, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6319554, Length=259, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI19921202, Length=198, Percent_Identity=39.3939393939394, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI17137560, Length=197, Percent_Identity=32.48730964467, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI161076488, Length=197, Percent_Identity=32.48730964467, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI161076486, Length=197, Percent_Identity=32.48730964467, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI45552965, Length=244, Percent_Identity=31.9672131147541, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281365776, Length=244, Percent_Identity=31.9672131147541, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24660075, Length=244, Percent_Identity=31.9672131147541, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24652279, Length=203, Percent_Identity=33.4975369458128, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI17738151, Length=199, Percent_Identity=31.6582914572864, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI281363136, Length=190, Percent_Identity=34.2105263157895, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI78707192, Length=190, Percent_Identity=34.2105263157895, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI20129529, Length=188, Percent_Identity=32.9787234042553, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24649446, Length=196, Percent_Identity=30.6122448979592, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28574878, Length=197, Percent_Identity=31.9796954314721, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24665814, Length=197, Percent_Identity=31.9796954314721, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24640100, Length=210, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI18859657, Length=231, Percent_Identity=32.4675324675325, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24644145, Length=191, Percent_Identity=34.5549738219895, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24656825, Length=229, Percent_Identity=29.2576419213974, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24639391, Length=196, Percent_Identity=33.1632653061224, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24656820, Length=229, Percent_Identity=29.2576419213974, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI19920408, Length=199, Percent_Identity=30.1507537688442, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24658770, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24663015, Length=241, Percent_Identity=26.9709543568465, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI20129423, Length=189, Percent_Identity=30.6878306878307, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI18860063, Length=155, Percent_Identity=29.0322580645161, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281360136, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644411, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281360142, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21357333, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281360144, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281360140, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281360146, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281360138, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24651451, Length=197, Percent_Identity=29.4416243654822, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17137738, Length=207, Percent_Identity=30.4347826086957, Blast_Score=82, Evalue=9e-16,
Organism=Drosophila melanogaster, GI281361487, Length=155, Percent_Identity=27.0967741935484, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355121, Length=182, Percent_Identity=30.2197802197802, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571849, Length=183, Percent_Identity=32.2404371584699, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571847, Length=183, Percent_Identity=32.2404371584699, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24581396, Length=180, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28573010, Length=249, Percent_Identity=30.1204819277108, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17864540, Length=248, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 57655; Mature: 57524

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSVSVRDIQTLILSYHPVIVIETLEEERVQTLLKKATEEMSIPMFEWSIAQGLIRSPG
CCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
TFNAPWVNEYAPPGTLKPAAIGNTAEPLAVLKHVQDMSIKALFWLKDFGKHFEDPETARH
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
FREAAQLFSQKRSAFVLTGDNIELPREIEHDAVVYDLKLPDRDELSRTVKEVVRTMRHKH
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC
RTIVELEDQDMQALVQAMTGMTLKQARQVLAYAALDDGKLTTDDVERILHRKAQLIRAGG
CEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
VLDYLPVEGNRVEWGGFANLKNWLGRAKVGFSPAAKALNLTPPKGILIVGIQGCGKSLAA
CEEEECCCCCEEECCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHHH
KAIAREWKMPLLKLDAGRLYDKFVGESEKNFRKAISLAESMAPAVLWIDEIEKSLGATGS
HHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
DSDGGLSRRMFGFFLTWMQEKSQEVFVVATANDISQIPPELLRKGRFDEIFYVDLPDLQE
CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCHHHHHCCCCCCEEEEECCCHHH
RGAIFRIHLMLRKQDPSHFDMPTLLQASEGYSGAEIEQAVVAALYRALYVEKPLDTELLV
CCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
QEIQGMIPLSVSRQEHLKQLRNLAQDRFMSAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLSVSVRDIQTLILSYHPVIVIETLEEERVQTLLKKATEEMSIPMFEWSIAQGLIRSPG
CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
TFNAPWVNEYAPPGTLKPAAIGNTAEPLAVLKHVQDMSIKALFWLKDFGKHFEDPETARH
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
FREAAQLFSQKRSAFVLTGDNIELPREIEHDAVVYDLKLPDRDELSRTVKEVVRTMRHKH
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC
RTIVELEDQDMQALVQAMTGMTLKQARQVLAYAALDDGKLTTDDVERILHRKAQLIRAGG
CEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
VLDYLPVEGNRVEWGGFANLKNWLGRAKVGFSPAAKALNLTPPKGILIVGIQGCGKSLAA
CEEEECCCCCEEECCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHHH
KAIAREWKMPLLKLDAGRLYDKFVGESEKNFRKAISLAESMAPAVLWIDEIEKSLGATGS
HHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
DSDGGLSRRMFGFFLTWMQEKSQEVFVVATANDISQIPPELLRKGRFDEIFYVDLPDLQE
CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCHHHHHCCCCCCEEEEECCCHHH
RGAIFRIHLMLRKQDPSHFDMPTLLQASEGYSGAEIEQAVVAALYRALYVEKPLDTELLV
CCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
QEIQGMIPLSVSRQEHLKQLRNLAQDRFMSAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]