| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yhjX [C]
Identifier: 158338492
GI number: 158338492
Start: 5456015
End: 5457268
Strand: Direct
Name: yhjX [C]
Synonym: AM1_5394
Alternate gene names: 158338492
Gene position: 5456015-5457268 (Clockwise)
Preceding gene: 158338491
Following gene: 158338497
Centisome position: 83.89
GC content: 50.88
Gene sequence:
>1254_bases ATGAGTATTCCGGGTCAAACCATGGGAGTGAGCGTCTTTACAGACTATTTGATTGAGGCGACAGGGGTATCGCGGCTGCA GCTCAGTAATGCCTATCTGATTGGCACGGTGACCAGCGGACTGCTGTTGCCCTTTGGAGGTGTATTTCTCGATCGGTTTG GAACGCGCCTGTCGGTGGTGTTGGCTTCAGTATGGTTGGGACTGACATTGGGATATATGAGTGTGTGCGATCGCATCGCC GTATCCCTTAGTCAAAACTTCAACTTACCTACCTCCAGCTATGTGGCCTTCGGCTTGTTAGTACTGGGTTTCACCAGCCT GAGATTCAGCGGTCAAGGCATGCTCACCATGTCCAGTCGCAACACATTGGGAAAATGGTTTGATAAACGACGGGGACTGG CCTCTGGCATTGCCGGGGTATTTATCTCTTTTGGGTTCGCCGCTACCCCCACTATCGTCAACGCTTGGATTGAAGCGACT ACTTGGCGATGGGCCTGGGTGAGTATGGGGCTAATCGTAAGCATAGGCATGGGCAGCTTAGGCTGGATCTTCTATCGCGA TAACCCTGAAGAATGTGGCTTACAGATGGACGGCAAAATTTCATCTGCAGGCTCAAATCAATCTCCAACCGATCCAGACA CTCGCACTGATTTCACTCGGGGTGAGGCCCTTCGTACGCCAGCTTTTTGGGCCGTCACCTTAGCACTGTCTTGCCAGGCA TTAGCGATCACAGGGATTACCTTTCATATCGTTGATCTGGGGGCAGAAGTTGGATTAACCAAGGCTGAAGCAGTAGCCCT ATTTATACCGATGGCATTGGTATCGACCATGATGGGGTCTTTGATGGGGTTTGCCGCCGATCGAATTCGGCTGCAATTTC TGTTTATGGGCATGATGACGGCCCTGGGTGTTGGAATTGCCAGTATGGCTAATTTAGATATTGTGGCTTTACGCGGCCTA GCAATTGCGGGATTGGGCAGTAGTGGGGGGTGCTTTGGCACCTTATCGGCTGTGGCCTTGCCTCGTTTCTTTGGCCGAAC TCATTTGGGTGCCATTTCAGGGGTACAGATGATGAGTATCGTCTTTGCCAGTGCGATTGGTCCTTCTTGGATGGCACTCT TCAAGGACGTTGCGGGATCCTACAAAATGGGCCTCTATTGCTTCTGTATTCTTCCACCCATTATTCTGCTGCTGAATTGG ATAGCCCCAAATCCACAATTGCAAACTCATCTGCCATCCTCCAATTCGAGGTAA
Upstream 100 bases:
>100_bases GATTCATCCGCTGCTTCGCCCCCACTGGCCCTTTGACCCAAGTAAGCTGCCTTTTTTTTATGGCTGGGCGATTTTAGCAG CCTGCACTATCGGAATCATC
Downstream 100 bases:
>100_bases ATTTTCTATTTCCTCTTAATACAAGATGAGATAGAGTCAAAAACAACGAAGATAAAGCATTCCATATGGAATCAATATCT ACCCTAAAAAGAGCACCCCA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSIPGQTMGVSVFTDYLIEATGVSRLQLSNAYLIGTVTSGLLLPFGGVFLDRFGTRLSVVLASVWLGLTLGYMSVCDRIA VSLSQNFNLPTSSYVAFGLLVLGFTSLRFSGQGMLTMSSRNTLGKWFDKRRGLASGIAGVFISFGFAATPTIVNAWIEAT TWRWAWVSMGLIVSIGMGSLGWIFYRDNPEECGLQMDGKISSAGSNQSPTDPDTRTDFTRGEALRTPAFWAVTLALSCQA LAITGITFHIVDLGAEVGLTKAEAVALFIPMALVSTMMGSLMGFAADRIRLQFLFMGMMTALGVGIASMANLDIVALRGL AIAGLGSSGGCFGTLSAVALPRFFGRTHLGAISGVQMMSIVFASAIGPSWMALFKDVAGSYKMGLYCFCILPPIILLLNW IAPNPQLQTHLPSSNSR
Sequences:
>Translated_417_residues MSIPGQTMGVSVFTDYLIEATGVSRLQLSNAYLIGTVTSGLLLPFGGVFLDRFGTRLSVVLASVWLGLTLGYMSVCDRIA VSLSQNFNLPTSSYVAFGLLVLGFTSLRFSGQGMLTMSSRNTLGKWFDKRRGLASGIAGVFISFGFAATPTIVNAWIEAT TWRWAWVSMGLIVSIGMGSLGWIFYRDNPEECGLQMDGKISSAGSNQSPTDPDTRTDFTRGEALRTPAFWAVTLALSCQA LAITGITFHIVDLGAEVGLTKAEAVALFIPMALVSTMMGSLMGFAADRIRLQFLFMGMMTALGVGIASMANLDIVALRGL AIAGLGSSGGCFGTLSAVALPRFFGRTHLGAISGVQMMSIVFASAIGPSWMALFKDVAGSYKMGLYCFCILPPIILLLNW IAPNPQLQTHLPSSNSR >Mature_416_residues SIPGQTMGVSVFTDYLIEATGVSRLQLSNAYLIGTVTSGLLLPFGGVFLDRFGTRLSVVLASVWLGLTLGYMSVCDRIAV SLSQNFNLPTSSYVAFGLLVLGFTSLRFSGQGMLTMSSRNTLGKWFDKRRGLASGIAGVFISFGFAATPTIVNAWIEATT WRWAWVSMGLIVSIGMGSLGWIFYRDNPEECGLQMDGKISSAGSNQSPTDPDTRTDFTRGEALRTPAFWAVTLALSCQAL AITGITFHIVDLGAEVGLTKAEAVALFIPMALVSTMMGSLMGFAADRIRLQFLFMGMMTALGVGIASMANLDIVALRGLA IAGLGSSGGCFGTLSAVALPRFFGRTHLGAISGVQMMSIVFASAIGPSWMALFKDVAGSYKMGLYCFCILPPIILLLNWI APNPQLQTHLPSSNSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44415; Mature: 44283
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPGQTMGVSVFTDYLIEATGVSRLQLSNAYLIGTVTSGLLLPFGGVFLDRFGTRLSVV CCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHH LASVWLGLTLGYMSVCDRIAVSLSQNFNLPTSSYVAFGLLVLGFTSLRFSGQGMLTMSSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEECCC NTLGKWFDKRRGLASGIAGVFISFGFAATPTIVNAWIEATTWRWAWVSMGLIVSIGMGSL CHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEHHHHHHHHHHEECCCCE GWIFYRDNPEECGLQMDGKISSAGSNQSPTDPDTRTDFTRGEALRTPAFWAVTLALSCQA EEEEECCCHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHE LAITGITFHIVDLGAEVGLTKAEAVALFIPMALVSTMMGSLMGFAADRIRLQFLFMGMMT EEEECEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGVGIASMANLDIVALRGLAIAGLGSSGGCFGTLSAVALPRFFGRTHLGAISGVQMMSI HHHHHHHHHCCCHHEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VFASAIGPSWMALFKDVAGSYKMGLYCFCILPPIILLLNWIAPNPQLQTHLPSSNSR HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure SIPGQTMGVSVFTDYLIEATGVSRLQLSNAYLIGTVTSGLLLPFGGVFLDRFGTRLSVV CCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHH LASVWLGLTLGYMSVCDRIAVSLSQNFNLPTSSYVAFGLLVLGFTSLRFSGQGMLTMSSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEECCC NTLGKWFDKRRGLASGIAGVFISFGFAATPTIVNAWIEATTWRWAWVSMGLIVSIGMGSL CHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEHHHHHHHHHHEECCCCE GWIFYRDNPEECGLQMDGKISSAGSNQSPTDPDTRTDFTRGEALRTPAFWAVTLALSCQA EEEEECCCHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHE LAITGITFHIVDLGAEVGLTKAEAVALFIPMALVSTMMGSLMGFAADRIRLQFLFMGMMT EEEECEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGVGIASMANLDIVALRGLAIAGLGSSGGCFGTLSAVALPRFFGRTHLGAISGVQMMSI HHHHHHHHHCCCHHEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VFASAIGPSWMALFKDVAGSYKMGLYCFCILPPIILLLNWIAPNPQLQTHLPSSNSR HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA