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The map label for this gene is ccmM [H]

Identifier: 158338481

GI number: 158338481

Start: 5442853

End: 5445264

Strand: Direct

Name: ccmM [H]

Synonym: AM1_5383

Alternate gene names: 158338481

Gene position: 5442853-5445264 (Clockwise)

Preceding gene: 158338480

Following gene: 158338482

Centisome position: 83.69

GC content: 49.54

Gene sequence:

>2412_bases
ATGGTAATCCATAGCCCATCAACATCAGCATCTATGCAGGCAGGGAATCTACCCGATCCAAGGGTAAGTTCTTCTGCCTA
TGTTCACTCATTTGCAAAAGTAATGGGTGATGTTCACGTGGGCGCAAATGCACTGATTGCGCCTGGAAGTACGATTCAGG
CCGATCAAGGACTTCCCTTTCACATCGGCGACAACGTTAATATCCAAGATGGAGCAGTCATCCACGCCATTGAACCAGGG
CAAGTTCGCGGTAAGGATGGCCAGAATTATGCCGTTTGGATTGGCAATAACAGTTGCGTCACCCATATGGCCCTTATACA
TGGGCCTGCCTTTATCGGTGACAACTGTTTTATTGGCTTTCGCTCGACAGTCTTTAACGCCAAGGTGGGTGATAACTGCG
TGATTATGATGCACGCGTTAATTCAGGGAGTAGAAATTCCACCTGGCAAGTATGTGCCTTCTGGTGCCGTAATTACGAAA
CAAGAGCAGGCCAATCTTCTACCTGATGTATTGGAAAGCGATCGCAAATTCACTCAGCAAATCATTCATGTAAATGAGGC
CCTAAAAAGTGAAATTTCTGGGGCTAGCACTAAAACCTCTATTCGACCGGCCCGAGCCAACATCGGCCATTCTCAATCAC
ACCGTTTTACTACTGATACCAAGCCAATGAACCATACCACCCTAGATGCTGCAATTGTGAGTCAAGTTCGGTCACTCCTG
GCACAAGGATATCGAATTGGCAGTGAACATGCCGACAAACGCCGCTTCCAAACCAGCTCTTGGCAAAGCTGTCCATCCAT
TACTAGTACCAATGAATCGCAAGTATTGGCTGGGATAGAATCTTGCATGTCGGAGCATCAAGGGGAATATGTCCGGTTAA
TTGGGATTGATACCCAAGCCAGACAGCGGGTGCTGGAAACCATTATTCAACGTCCAGATGGTCCGGTGAAATCGGCCTCT
ATCAGTTCTGTGACGAAGACGATTAAAAATTACACCACTAGCCATATCAGCAGCAGCGGCAACATTGATGCAGAAACCAT
TGCCCATGTGCGCTCCCTCCTAGGTCAAGGCTACCGGATTGGCACCGAACATGCCGATGCTCGTCGTTTTCAAACGAGCT
CTTGGCAAAGCTGCTCCCCCATTGCCTCGCAGCAGGAATCCCAAGTGGTTGCAGCATTGGAAGCTTGTATCGTTGAGCAT
CAAGGGGAATATGTCCGCATGCTGGGCATTGATACCCAAGCCAAGCAAAGGGTGTTTGAAGCAATTATTCAACGTCCTAG
CGACAAGCCTAAAGCAGCCCCTAAAGCTTCTCGGCCTGCTTCTACTTCATCCTCAAGCAGCAGTTATGCCAGTCCGAGTT
ATGCCAGCAGCAGTCCTAATAGTGGGACTAGCACAGGTTTAGGGGCGGATGCCATTGCCCAAGTCCGCTCTCTTCTGGCC
CAAGGTTATCGAGTCGGTTATGAGTATGCAGACAAGCGCCGCTTCCAAACCAGTTCCTGGCAAAGCTGCACACCCATCAA
TTCCCAGCAAGAATCTCAAGTCATTGCCGCTTTAGAAAGCTGTATTGCAGAACATCCCGGCAACTATGTTCGCCTTATCG
GGATTGACCCGAAAGCCAAACGCCGAGTCCTAGAAGTCATCATTCAGCGTCCAGATAGCAATAGTAAAGCCAGTCCATCA
GCCCCTAAAGCGAGACCGGCAAGCTCCAGCTCTAGCTATTCCAGCAAAGTCGAAAGTAATAGTTCAAGCTACCGTCCTGC
CCCTTCGGCTGGCCTAGATGGAACGGTTGTGAATCAGATTCGCTCTCTCTTAGCCCAAGGCTATCGAATTGGCACTGAAT
ATGCAGACAAACGTCGCTTCCAAACCAGTTCCTGGCAAAGCTGCACCCCCATTGCTTCACAGCAAGAATCTCAGGTGATT
GCTGGCGTCGAAGCCTGTATGGCCGAACATCCCAATGACTATGTTCGTCTGATTGGCATCGACAAGCGGGCCAAGAGACG
GATGTCTGAAACGATTATTCAACGTCCTGGTGGATCAACTGCGACTTCATCATCAGTGAAGACGTCAAGTTCTCGCTCTT
ATCAAGCGCCGGCGGCTAAAAGCTCTCGAGGACGTGGATTTAGCCCCCGCAATGGTGGTAGCTTAGATGCTGATACCGTA
GCGCAAGTGCGATCACTTCTAGCCCAAGGCTACCGAATTAGCACAGAATATGCGGATAAACGTCGGTTCCAAACCAGTTC
TTGGCAAAGCTGTCCTCCCATTAAAACCCAGCAAGAATCCCAGGTGATTGCTGCATTAGAATCCTGCATGGCCGACCACC
AAAAAGAATATGTCCGCTTAATTGGTATTGATACCAATGCCAAGCGACGCGTCTTAGAATCCGTGATTCAAAAGCCCGTG
GCAGCGCACTAG

Upstream 100 bases:

>100_bases
GTTCCTGAGGTAATGAGCTTGATTCCTAAACCTAATTAGCCTTCACTTCTTTTGTCACTACTCACTCGCGATCGCGTTTT
GTGTAGGGGAGTTCGTCATT

Downstream 100 bases:

>100_bases
ATGCCATGTCACAAAGGTCTTAGTCTGAACGATCTTGTCACTCTTAGCCTAAGAGCCTAAGGTTCATTGCTGATGCAACT
TTCCCCCCCGCAACCGGTTA

Product: carbon dioxide concentrating mechanism protein CcmM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 803; Mature: 803

Protein sequence:

>803_residues
MVIHSPSTSASMQAGNLPDPRVSSSAYVHSFAKVMGDVHVGANALIAPGSTIQADQGLPFHIGDNVNIQDGAVIHAIEPG
QVRGKDGQNYAVWIGNNSCVTHMALIHGPAFIGDNCFIGFRSTVFNAKVGDNCVIMMHALIQGVEIPPGKYVPSGAVITK
QEQANLLPDVLESDRKFTQQIIHVNEALKSEISGASTKTSIRPARANIGHSQSHRFTTDTKPMNHTTLDAAIVSQVRSLL
AQGYRIGSEHADKRRFQTSSWQSCPSITSTNESQVLAGIESCMSEHQGEYVRLIGIDTQARQRVLETIIQRPDGPVKSAS
ISSVTKTIKNYTTSHISSSGNIDAETIAHVRSLLGQGYRIGTEHADARRFQTSSWQSCSPIASQQESQVVAALEACIVEH
QGEYVRMLGIDTQAKQRVFEAIIQRPSDKPKAAPKASRPASTSSSSSSYASPSYASSSPNSGTSTGLGADAIAQVRSLLA
QGYRVGYEYADKRRFQTSSWQSCTPINSQQESQVIAALESCIAEHPGNYVRLIGIDPKAKRRVLEVIIQRPDSNSKASPS
APKARPASSSSSYSSKVESNSSSYRPAPSAGLDGTVVNQIRSLLAQGYRIGTEYADKRRFQTSSWQSCTPIASQQESQVI
AGVEACMAEHPNDYVRLIGIDKRAKRRMSETIIQRPGGSTATSSSVKTSSSRSYQAPAAKSSRGRGFSPRNGGSLDADTV
AQVRSLLAQGYRISTEYADKRRFQTSSWQSCPPIKTQQESQVIAALESCMADHQKEYVRLIGIDTNAKRRVLESVIQKPV
AAH

Sequences:

>Translated_803_residues
MVIHSPSTSASMQAGNLPDPRVSSSAYVHSFAKVMGDVHVGANALIAPGSTIQADQGLPFHIGDNVNIQDGAVIHAIEPG
QVRGKDGQNYAVWIGNNSCVTHMALIHGPAFIGDNCFIGFRSTVFNAKVGDNCVIMMHALIQGVEIPPGKYVPSGAVITK
QEQANLLPDVLESDRKFTQQIIHVNEALKSEISGASTKTSIRPARANIGHSQSHRFTTDTKPMNHTTLDAAIVSQVRSLL
AQGYRIGSEHADKRRFQTSSWQSCPSITSTNESQVLAGIESCMSEHQGEYVRLIGIDTQARQRVLETIIQRPDGPVKSAS
ISSVTKTIKNYTTSHISSSGNIDAETIAHVRSLLGQGYRIGTEHADARRFQTSSWQSCSPIASQQESQVVAALEACIVEH
QGEYVRMLGIDTQAKQRVFEAIIQRPSDKPKAAPKASRPASTSSSSSSYASPSYASSSPNSGTSTGLGADAIAQVRSLLA
QGYRVGYEYADKRRFQTSSWQSCTPINSQQESQVIAALESCIAEHPGNYVRLIGIDPKAKRRVLEVIIQRPDSNSKASPS
APKARPASSSSSYSSKVESNSSSYRPAPSAGLDGTVVNQIRSLLAQGYRIGTEYADKRRFQTSSWQSCTPIASQQESQVI
AGVEACMAEHPNDYVRLIGIDKRAKRRMSETIIQRPGGSTATSSSVKTSSSRSYQAPAAKSSRGRGFSPRNGGSLDADTV
AQVRSLLAQGYRISTEYADKRRFQTSSWQSCPPIKTQQESQVIAALESCMADHQKEYVRLIGIDTNAKRRVLESVIQKPV
AAH
>Mature_803_residues
MVIHSPSTSASMQAGNLPDPRVSSSAYVHSFAKVMGDVHVGANALIAPGSTIQADQGLPFHIGDNVNIQDGAVIHAIEPG
QVRGKDGQNYAVWIGNNSCVTHMALIHGPAFIGDNCFIGFRSTVFNAKVGDNCVIMMHALIQGVEIPPGKYVPSGAVITK
QEQANLLPDVLESDRKFTQQIIHVNEALKSEISGASTKTSIRPARANIGHSQSHRFTTDTKPMNHTTLDAAIVSQVRSLL
AQGYRIGSEHADKRRFQTSSWQSCPSITSTNESQVLAGIESCMSEHQGEYVRLIGIDTQARQRVLETIIQRPDGPVKSAS
ISSVTKTIKNYTTSHISSSGNIDAETIAHVRSLLGQGYRIGTEHADARRFQTSSWQSCSPIASQQESQVVAALEACIVEH
QGEYVRMLGIDTQAKQRVFEAIIQRPSDKPKAAPKASRPASTSSSSSSYASPSYASSSPNSGTSTGLGADAIAQVRSLLA
QGYRVGYEYADKRRFQTSSWQSCTPINSQQESQVIAALESCIAEHPGNYVRLIGIDPKAKRRVLEVIIQRPDSNSKASPS
APKARPASSSSSYSSKVESNSSSYRPAPSAGLDGTVVNQIRSLLAQGYRIGTEYADKRRFQTSSWQSCTPIASQQESQVI
AGVEACMAEHPNDYVRLIGIDKRAKRRMSETIIQRPGGSTATSSSVKTSSSRSYQAPAAKSSRGRGFSPRNGGSLDADTV
AQVRSLLAQGYRISTEYADKRRFQTSSWQSCPPIKTQQESQVIAALESCMADHQKEYVRLIGIDTNAKRRVLESVIQKPV
AAH

Specific function: The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator [H]

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017156
- InterPro:   IPR000894
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 86736; Mature: 86736

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIHSPSTSASMQAGNLPDPRVSSSAYVHSFAKVMGDVHVGANALIAPGSTIQADQGLPF
CEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCE
HIGDNVNIQDGAVIHAIEPGQVRGKDGQNYAVWIGNNSCVTHMALIHGPAFIGDNCFIGF
EECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEECCCEEEEE
RSTVFNAKVGDNCVIMMHALIQGVEIPPGKYVPSGAVITKQEQANLLPDVLESDRKFTQQ
HHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHH
IIHVNEALKSEISGASTKTSIRPARANIGHSQSHRFTTDTKPMNHTTLDAAIVSQVRSLL
HHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH
AQGYRIGSEHADKRRFQTSSWQSCPSITSTNESQVLAGIESCMSEHQGEYVRLIGIDTQA
HHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
RQRVLETIIQRPDGPVKSASISSVTKTIKNYTTSHISSSGNIDAETIAHVRSLLGQGYRI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
GTEHADARRFQTSSWQSCSPIASQQESQVVAALEACIVEHQGEYVRMLGIDTQAKQRVFE
CCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
AIIQRPSDKPKAAPKASRPASTSSSSSSYASPSYASSSPNSGTSTGLGADAIAQVRSLLA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGYRVGYEYADKRRFQTSSWQSCTPINSQQESQVIAALESCIAEHPGNYVRLIGIDPKAK
HHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
RRVLEVIIQRPDSNSKASPSAPKARPASSSSSYSSKVESNSSSYRPAPSAGLDGTVVNQI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
RSLLAQGYRIGTEYADKRRFQTSSWQSCTPIASQQESQVIAGVEACMAEHPNDYVRLIGI
HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
DKRAKRRMSETIIQRPGGSTATSSSVKTSSSRSYQAPAAKSSRGRGFSPRNGGSLDADTV
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AQVRSLLAQGYRISTEYADKRRFQTSSWQSCPPIKTQQESQVIAALESCMADHQKEYVRL
HHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEE
IGIDTNAKRRVLESVIQKPVAAH
EECCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVIHSPSTSASMQAGNLPDPRVSSSAYVHSFAKVMGDVHVGANALIAPGSTIQADQGLPF
CEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCE
HIGDNVNIQDGAVIHAIEPGQVRGKDGQNYAVWIGNNSCVTHMALIHGPAFIGDNCFIGF
EECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEECCCEEEEE
RSTVFNAKVGDNCVIMMHALIQGVEIPPGKYVPSGAVITKQEQANLLPDVLESDRKFTQQ
HHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHH
IIHVNEALKSEISGASTKTSIRPARANIGHSQSHRFTTDTKPMNHTTLDAAIVSQVRSLL
HHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH
AQGYRIGSEHADKRRFQTSSWQSCPSITSTNESQVLAGIESCMSEHQGEYVRLIGIDTQA
HHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
RQRVLETIIQRPDGPVKSASISSVTKTIKNYTTSHISSSGNIDAETIAHVRSLLGQGYRI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
GTEHADARRFQTSSWQSCSPIASQQESQVVAALEACIVEHQGEYVRMLGIDTQAKQRVFE
CCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
AIIQRPSDKPKAAPKASRPASTSSSSSSYASPSYASSSPNSGTSTGLGADAIAQVRSLLA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGYRVGYEYADKRRFQTSSWQSCTPINSQQESQVIAALESCIAEHPGNYVRLIGIDPKAK
HHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
RRVLEVIIQRPDSNSKASPSAPKARPASSSSSYSSKVESNSSSYRPAPSAGLDGTVVNQI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
RSLLAQGYRIGTEYADKRRFQTSSWQSCTPIASQQESQVIAGVEACMAEHPNDYVRLIGI
HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
DKRAKRRMSETIIQRPGGSTATSSSVKTSSSRSYQAPAAKSSRGRGFSPRNGGSLDADTV
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AQVRSLLAQGYRISTEYADKRRFQTSSWQSCPPIKTQQESQVIAALESCMADHQKEYVRL
HHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEE
IGIDTNAKRRVLESVIQKPVAAH
EECCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]