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The map label for this gene is yfhM [H]

Identifier: 158338469

GI number: 158338469

Start: 5430228

End: 5431121

Strand: Direct

Name: yfhM [H]

Synonym: AM1_5371

Alternate gene names: 158338469

Gene position: 5430228-5431121 (Clockwise)

Preceding gene: 158338468

Following gene: 158338470

Centisome position: 83.49

GC content: 47.65

Gene sequence:

>894_bases
ATGACCACTGCGAGTTCCGGCTGGCAACACCAGTTTATTCAAACCAATAAGATTCGGCTCCACTATGTCACCCAAGGTGA
AGGCGATTTAGTTATTCTTCTCCATGGATTTCCTGAGTTTTGGTACTCTTGGCGGTATCAGCTTCCAGTTCTAGCCCGTC
ATTTCAAGGTTGTGGTCCCTGATCTACGGGGGTACAACGATTCAGACAAACCGTCGAGCGGCTATGATATCGACACCCTC
AGCGAGGATATTGTTGGTTTAATCCAGAACTTAGGCTATCGCTGTGCTCATATCGTTGGTCATGACACAGGCGGAATGAT
TGCCTGGAACTTGGCTCAAAAATTTCCCCAATATTTACAGAACTTAGTTCTCTTAAATGCGCCTCATCCCCAACGATTGT
TTCGAGAGTTTTCTAGCAATCTTGATCAGCTTCGCCGCAGCTGGTATCTGTTGGCTTTCCAGATCCCGGGGCTACCGGAA
TGGCTCATTCAATCCAATCTGCGCCAATTTCTCCAGGACTGGTTCCAGAAACAAGCCATTCGCAAAGCGGCCTTCTCTTC
TGAAACTTTAGGGATTTATCAGGCTGCCCTAGAAAAACGTGGAGTCCTGTCTGCCGCGATTAACTATTATCGGCAGTTGC
TGTCTCCCCAAGACTGGTTGTCCAATTCGGATCGCAAACTGTTGCCCATCCAAGTCCCTACTTTGGTGTTGTGGGGAGAA
GATGACACAGTTTTAAGCCCCAACTTAGCACTGGGTTTTGAGCGGTTTGTACAGGCTCCATTTCGCCTCAAGTTTGTTCC
TGAATGCGGCCATTGGATTCAGCAGGAAGTTCCCAAAATTGTGAATCGAGAGCTACTAGATTTTCTGCGTCAGAGTAAGC
CTGCTTTTAGCTAG

Upstream 100 bases:

>100_bases
AGCAGGGGGTAAATTGTGTAGCCATCTTGATCCTTCAAGACTGGCTCAATGGCAAACTGTCATGTTTCAATTACCACCCA
TTGAGGTTGCACTGTAACGT

Downstream 100 bases:

>100_bases
GTTAAAAATCTTTCAGCTAATTGCCTGGAACCAAGGAGCTATTTCAAAACAATGGATCGGCAAGAAGCCTTACTTGCGTT
GACCCAAGCAGGTCTTAAAG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTTASSGWQHQFIQTNKIRLHYVTQGEGDLVILLHGFPEFWYSWRYQLPVLARHFKVVVPDLRGYNDSDKPSSGYDIDTL
SEDIVGLIQNLGYRCAHIVGHDTGGMIAWNLAQKFPQYLQNLVLLNAPHPQRLFREFSSNLDQLRRSWYLLAFQIPGLPE
WLIQSNLRQFLQDWFQKQAIRKAAFSSETLGIYQAALEKRGVLSAAINYYRQLLSPQDWLSNSDRKLLPIQVPTLVLWGE
DDTVLSPNLALGFERFVQAPFRLKFVPECGHWIQQEVPKIVNRELLDFLRQSKPAFS

Sequences:

>Translated_297_residues
MTTASSGWQHQFIQTNKIRLHYVTQGEGDLVILLHGFPEFWYSWRYQLPVLARHFKVVVPDLRGYNDSDKPSSGYDIDTL
SEDIVGLIQNLGYRCAHIVGHDTGGMIAWNLAQKFPQYLQNLVLLNAPHPQRLFREFSSNLDQLRRSWYLLAFQIPGLPE
WLIQSNLRQFLQDWFQKQAIRKAAFSSETLGIYQAALEKRGVLSAAINYYRQLLSPQDWLSNSDRKLLPIQVPTLVLWGE
DDTVLSPNLALGFERFVQAPFRLKFVPECGHWIQQEVPKIVNRELLDFLRQSKPAFS
>Mature_296_residues
TTASSGWQHQFIQTNKIRLHYVTQGEGDLVILLHGFPEFWYSWRYQLPVLARHFKVVVPDLRGYNDSDKPSSGYDIDTLS
EDIVGLIQNLGYRCAHIVGHDTGGMIAWNLAQKFPQYLQNLVLLNAPHPQRLFREFSSNLDQLRRSWYLLAFQIPGLPEW
LIQSNLRQFLQDWFQKQAIRKAAFSSETLGIYQAALEKRGVLSAAINYYRQLLSPQDWLSNSDRKLLPIQVPTLVLWGED
DTVLSPNLALGFERFVQAPFRLKFVPECGHWIQQEVPKIVNRELLDFLRQSKPAFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=292, Percent_Identity=37.3287671232877, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI218777840, Length=296, Percent_Identity=34.7972972972973, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI13376164, Length=296, Percent_Identity=34.7972972972973, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI27597073, Length=314, Percent_Identity=30.2547770700637, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17554012, Length=294, Percent_Identity=33.6734693877551, Blast_Score=190, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI17562298, Length=294, Percent_Identity=32.9931972789116, Blast_Score=181, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34429; Mature: 34298

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASSGWQHQFIQTNKIRLHYVTQGEGDLVILLHGFPEFWYSWRYQLPVLARHFKVVVP
CCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHEEEC
DLRGYNDSDKPSSGYDIDTLSEDIVGLIQNLGYRCAHIVGHDTGGMIAWNLAQKFPQYLQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHEECCCCCEEEHHHHHHHHHHHH
NLVLLNAPHPQRLFREFSSNLDQLRRSWYLLAFQIPGLPEWLIQSNLRQFLQDWFQKQAI
HHEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
RKAAFSSETLGIYQAALEKRGVLSAAINYYRQLLSPQDWLSNSDRKLLPIQVPTLVLWGE
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCEEEEECC
DDTVLSPNLALGFERFVQAPFRLKFVPECGHWIQQEVPKIVNRELLDFLRQSKPAFS
CCCEECCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTASSGWQHQFIQTNKIRLHYVTQGEGDLVILLHGFPEFWYSWRYQLPVLARHFKVVVP
CCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHEEEC
DLRGYNDSDKPSSGYDIDTLSEDIVGLIQNLGYRCAHIVGHDTGGMIAWNLAQKFPQYLQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHEECCCCCEEEHHHHHHHHHHHH
NLVLLNAPHPQRLFREFSSNLDQLRRSWYLLAFQIPGLPEWLIQSNLRQFLQDWFQKQAI
HHEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
RKAAFSSETLGIYQAALEKRGVLSAAINYYRQLLSPQDWLSNSDRKLLPIQVPTLVLWGE
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCEEEEECC
DDTVLSPNLALGFERFVQAPFRLKFVPECGHWIQQEVPKIVNRELLDFLRQSKPAFS
CCCEECCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]