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The map label for this gene is 158338466

Identifier: 158338466

GI number: 158338466

Start: 5426476

End: 5427951

Strand: Reverse

Name: 158338466

Synonym: AM1_5368

Alternate gene names: NA

Gene position: 5427951-5426476 (Counterclockwise)

Preceding gene: 158338471

Following gene: 158338459

Centisome position: 83.46

GC content: 47.7

Gene sequence:

>1476_bases
ATGCTGCTGACCGCCCAATTATTATTGAGTTACCAGCGTTGTCATCGACAAGCGTATCTGGATGTCTATGAAGACAAAAC
TCAAAAATCTGCGCCCAGTGATTTTCTCAACAAACTTCGGCAAGATCGCCTTGAGCATCAACAGACCTTTTTCGCTCGCC
ACTCCTGGGTTCAACCGGACTATCCCAGATATGACTGGAAAGCCGGGGCCCAAGCAACCTTAGCCCTGATGCAGGCTGGC
ACTCCCTATATTCGGCGGGGCGTCCTCTGGATAGAACAAGGCAATGGCGTTGCCTTGCAAAGTATTCCCGATCTCCTCAC
TAAAATCGAGGGAACCTCAGACTTTGGAGATTGGCGGTATGTCCCAACAGATATTCGCTTGAGTAAGCGTCCCAAGTTGG
AATATCAAATCTTGGCAACCTTTCATGCTCACCTGTTGGCGAACATACAAGGGGTTTGGCCAGAGGAGTCCTATCTGTAC
TTGCGGGAACGAGGGCTTTATTCAGTTAATTTGACGATTAACCAGCCCAAGCTTGATCAATTACTCCTTGAACTCATCGA
GACAATCCAGACGCAACAAGAACCCGAAGTTTTTATTGTTAGTAATCGATGCAGCTTGTGTGGGTGGCTATCCCACTGCT
ACCAAATTGCTCAACAAGAACAACATTTATCCTTATTGCCAGGGGTTACCCCCAGTCGATATCCCATCCTCCAAGCTCAC
AATTTAGCGAGCGTAAAAGATTTAGCATTCGCGAATCCCATCCAATTAGCTGAGGTAACAGGATTTGGTCGAGAGGTTGC
CAATAAACTGATTTGTCAGGCCCAGGCGTTTGCCAACCAGGCTCCTGTAGTGTTTGCTGCCAGTGAGGTCAGCGCAATCG
CTGCCCAAATTTCCCCTGCTCCCATCGAACTCTATTTTGATATCGAAGCTGAACCCAGTCTCAATTTGGCCTATCTGCAT
GGGGTATTGGTCGTAGATCGAGAAAACCAAACTGAGACCTTTTATCCCCTCTTAGCCGATCAACCTCACCAGGAAGAGCA
AGCATGGCAGCAGTTCTTAGATTTAGTGCTGGCCTATCCCCAAGCGCCGATTTACCATTTTTGCGCCTACGAAGTTCAAA
CCGTTGAACGCTTAGCAGCCTTGTATGGTAGCCCCGATACAATAATTCAGCCTTTGCTGGAGCGATTTATTGATTTACAT
GCTCATGTGACCCACACGGTTGTGCTGCCCGTAGAAAGCTATACCTTGAAATTGATCGCACGATGGTTAGGGTTTCAATG
GCGCAATAGCGAAGCGAATGGAGCCCAGTCCATCTATTGGTATAGTGAATGGTTGTCTACGGGCGATCGCGATTTCCTCG
ATACGATTGTTGAGTACAACGAGGATGATTGCCAAGCCACCTATCAAATCAAAAATTGGCTAGCAGATTTTTTGGCTTTC
GAGTTAACAACGCCAGCCTTACAGTCCCCATGGTAG

Upstream 100 bases:

>100_bases
TCTCAGCCTATTGTGCTGCTCGATATCAGTCAAGGGAATTTACCGGTCAACCAGAAGTATTTGTTAAGATTCCTTCAGGG
AAATCCATTATTGTGTCTGC

Downstream 100 bases:

>100_bases
GTTTTAGCCTTGACCAAGTTCACAGGAACGATGGTAAGCGGCCTGAACAGCTTTGACCAGGGCTGATCGAAGTCCCGCTT
GCTCTAAAGCCGCAACTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: RecB Family-Like Nuclease; ATPase; Nuclease; Transposase; Transposase IS; AAA ATPase; DNA Repair Protein; Nuclease-Like Protein; RNA Helicase; Superfamily I DNA/RNA Helicase

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MLLTAQLLLSYQRCHRQAYLDVYEDKTQKSAPSDFLNKLRQDRLEHQQTFFARHSWVQPDYPRYDWKAGAQATLALMQAG
TPYIRRGVLWIEQGNGVALQSIPDLLTKIEGTSDFGDWRYVPTDIRLSKRPKLEYQILATFHAHLLANIQGVWPEESYLY
LRERGLYSVNLTINQPKLDQLLLELIETIQTQQEPEVFIVSNRCSLCGWLSHCYQIAQQEQHLSLLPGVTPSRYPILQAH
NLASVKDLAFANPIQLAEVTGFGREVANKLICQAQAFANQAPVVFAASEVSAIAAQISPAPIELYFDIEAEPSLNLAYLH
GVLVVDRENQTETFYPLLADQPHQEEQAWQQFLDLVLAYPQAPIYHFCAYEVQTVERLAALYGSPDTIIQPLLERFIDLH
AHVTHTVVLPVESYTLKLIARWLGFQWRNSEANGAQSIYWYSEWLSTGDRDFLDTIVEYNEDDCQATYQIKNWLADFLAF
ELTTPALQSPW

Sequences:

>Translated_491_residues
MLLTAQLLLSYQRCHRQAYLDVYEDKTQKSAPSDFLNKLRQDRLEHQQTFFARHSWVQPDYPRYDWKAGAQATLALMQAG
TPYIRRGVLWIEQGNGVALQSIPDLLTKIEGTSDFGDWRYVPTDIRLSKRPKLEYQILATFHAHLLANIQGVWPEESYLY
LRERGLYSVNLTINQPKLDQLLLELIETIQTQQEPEVFIVSNRCSLCGWLSHCYQIAQQEQHLSLLPGVTPSRYPILQAH
NLASVKDLAFANPIQLAEVTGFGREVANKLICQAQAFANQAPVVFAASEVSAIAAQISPAPIELYFDIEAEPSLNLAYLH
GVLVVDRENQTETFYPLLADQPHQEEQAWQQFLDLVLAYPQAPIYHFCAYEVQTVERLAALYGSPDTIIQPLLERFIDLH
AHVTHTVVLPVESYTLKLIARWLGFQWRNSEANGAQSIYWYSEWLSTGDRDFLDTIVEYNEDDCQATYQIKNWLADFLAF
ELTTPALQSPW
>Mature_491_residues
MLLTAQLLLSYQRCHRQAYLDVYEDKTQKSAPSDFLNKLRQDRLEHQQTFFARHSWVQPDYPRYDWKAGAQATLALMQAG
TPYIRRGVLWIEQGNGVALQSIPDLLTKIEGTSDFGDWRYVPTDIRLSKRPKLEYQILATFHAHLLANIQGVWPEESYLY
LRERGLYSVNLTINQPKLDQLLLELIETIQTQQEPEVFIVSNRCSLCGWLSHCYQIAQQEQHLSLLPGVTPSRYPILQAH
NLASVKDLAFANPIQLAEVTGFGREVANKLICQAQAFANQAPVVFAASEVSAIAAQISPAPIELYFDIEAEPSLNLAYLH
GVLVVDRENQTETFYPLLADQPHQEEQAWQQFLDLVLAYPQAPIYHFCAYEVQTVERLAALYGSPDTIIQPLLERFIDLH
AHVTHTVVLPVESYTLKLIARWLGFQWRNSEANGAQSIYWYSEWLSTGDRDFLDTIVEYNEDDCQATYQIKNWLADFLAF
ELTTPALQSPW

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56279; Mature: 56279

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTAQLLLSYQRCHRQAYLDVYEDKTQKSAPSDFLNKLRQDRLEHQQTFFARHSWVQPD
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YPRYDWKAGAQATLALMQAGTPYIRRGVLWIEQGNGVALQSIPDLLTKIEGTSDFGDWRY
CCCCCCCCCCHHHHHHHHCCCHHHHCCEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCEE
VPTDIRLSKRPKLEYQILATFHAHLLANIQGVWPEESYLYLRERGLYSVNLTINQPKLDQ
ECCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEECCCCHHH
LLLELIETIQTQQEPEVFIVSNRCSLCGWLSHCYQIAQQEQHLSLLPGVTPSRYPILQAH
HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
NLASVKDLAFANPIQLAEVTGFGREVANKLICQAQAFANQAPVVFAASEVSAIAAQISPA
CCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCC
PIELYFDIEAEPSLNLAYLHGVLVVDRENQTETFYPLLADQPHQEEQAWQQFLDLVLAYP
CEEEEEEEECCCCCEEEEEEEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCC
QAPIYHFCAYEVQTVERLAALYGSPDTIIQPLLERFIDLHAHVTHTVVLPVESYTLKLIA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHH
RWLGFQWRNSEANGAQSIYWYSEWLSTGDRDFLDTIVEYNEDDCQATYQIKNWLADFLAF
HHHCCEECCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ELTTPALQSPW
HHCCCCCCCCC
>Mature Secondary Structure
MLLTAQLLLSYQRCHRQAYLDVYEDKTQKSAPSDFLNKLRQDRLEHQQTFFARHSWVQPD
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YPRYDWKAGAQATLALMQAGTPYIRRGVLWIEQGNGVALQSIPDLLTKIEGTSDFGDWRY
CCCCCCCCCCHHHHHHHHCCCHHHHCCEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCEE
VPTDIRLSKRPKLEYQILATFHAHLLANIQGVWPEESYLYLRERGLYSVNLTINQPKLDQ
ECCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEECCCCHHH
LLLELIETIQTQQEPEVFIVSNRCSLCGWLSHCYQIAQQEQHLSLLPGVTPSRYPILQAH
HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
NLASVKDLAFANPIQLAEVTGFGREVANKLICQAQAFANQAPVVFAASEVSAIAAQISPA
CCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCC
PIELYFDIEAEPSLNLAYLHGVLVVDRENQTETFYPLLADQPHQEEQAWQQFLDLVLAYP
CEEEEEEEECCCCCEEEEEEEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCC
QAPIYHFCAYEVQTVERLAALYGSPDTIIQPLLERFIDLHAHVTHTVVLPVESYTLKLIA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHH
RWLGFQWRNSEANGAQSIYWYSEWLSTGDRDFLDTIVEYNEDDCQATYQIKNWLADFLAF
HHHCCEECCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ELTTPALQSPW
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA