| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338419
Identifier: 158338419
GI number: 158338419
Start: 5383812
End: 5384651
Strand: Reverse
Name: 158338419
Synonym: AM1_5319
Alternate gene names: NA
Gene position: 5384651-5383812 (Counterclockwise)
Preceding gene: 158338420
Following gene: 158338416
Centisome position: 82.79
GC content: 52.5
Gene sequence:
>840_bases ATGGGCTTGGGATTTTGTACTGCTCCGTCTCAACTGTCGCCACAGCCGCAGCAACCACCCCCCACTATGCAATATCAAAA GCAGGAACTATCGCAGGCAACCGTACATGTTCTGCGGATCCCAAACCATCCCCGCTATACCGTTCGTCTTGATGTCGTGG ACGGACTCCAAACCGTGGCTGACTTTGCCCAGGGCACTCCCAAGCCAGTTGCCGTAATCAATGGGGGATATTTTGACCCT GCCAATCAGCTAACCACCTCCTATATTCGGCGAGGGGGCCAAATCCTGGCTGACCCGACTCAGAATTCAAGATTGGTGGA TAATCCAGATCTGAAAGTCTATCTACCGAAGATCCTCAATCGCTCGGAGTTTCGGCAATATCAATGTGGCGCTAAGACTA CCTATGCCATTACCTCATACAACCAGCCTATTCCGCCAGACTGCACCCTTAACTACGCCTTGGGTGCGGGACCTCAGCTT CTTCCCCAACTGACCTCACAAGCAGAAGGGTTCACCGACTCAGTTGATGGCCAGGTAATTCGAGATGCCATTGGCAGTCG TCAGCCCAATGCTAGAAGTGCGGTCGGGATTACAGACAAGGGGGAGGTGATATGGGTGCTGGTGGAACAACAGTCTGCTA CAAAGCCCGGACTCTCTTTACCAGAGCTAGCGGATTTTATGGAACAGCAGGGCGCAGCGTCTGCCTTAAATCTGGATGGG GGCAGCTCGTCTTCCCTGGTGTATCAAGACCAGGTGATTACGGGTAGAAGCTTACAGGGAGAACCACTGCTTCGCCCTGT AAAGTCGGTTTTGATGGTGCTGGAGAATGCACCTAAATAA
Upstream 100 bases:
>100_bases AACTTATCGGATTGCCCACCGCCTCCAGCAAGGGGATCAGGTCTTTGAGTAGGAAATAGATATGAGATTGATTAGATGGT CTATCAGTATGTCTTTGGTC
Downstream 100 bases:
>100_bases AGCTGAAATCAATCGGTAGGACGGAGCACTAACGGCTTGGATGATACACCTTGATACTGCCTTGAGCGATCAGGGGTTGG AGAATTTCGTCCGTTAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MGLGFCTAPSQLSPQPQQPPPTMQYQKQELSQATVHVLRIPNHPRYTVRLDVVDGLQTVADFAQGTPKPVAVINGGYFDP ANQLTTSYIRRGGQILADPTQNSRLVDNPDLKVYLPKILNRSEFRQYQCGAKTTYAITSYNQPIPPDCTLNYALGAGPQL LPQLTSQAEGFTDSVDGQVIRDAIGSRQPNARSAVGITDKGEVIWVLVEQQSATKPGLSLPELADFMEQQGAASALNLDG GSSSSLVYQDQVITGRSLQGEPLLRPVKSVLMVLENAPK
Sequences:
>Translated_279_residues MGLGFCTAPSQLSPQPQQPPPTMQYQKQELSQATVHVLRIPNHPRYTVRLDVVDGLQTVADFAQGTPKPVAVINGGYFDP ANQLTTSYIRRGGQILADPTQNSRLVDNPDLKVYLPKILNRSEFRQYQCGAKTTYAITSYNQPIPPDCTLNYALGAGPQL LPQLTSQAEGFTDSVDGQVIRDAIGSRQPNARSAVGITDKGEVIWVLVEQQSATKPGLSLPELADFMEQQGAASALNLDG GSSSSLVYQDQVITGRSLQGEPLLRPVKSVLMVLENAPK >Mature_278_residues GLGFCTAPSQLSPQPQQPPPTMQYQKQELSQATVHVLRIPNHPRYTVRLDVVDGLQTVADFAQGTPKPVAVINGGYFDPA NQLTTSYIRRGGQILADPTQNSRLVDNPDLKVYLPKILNRSEFRQYQCGAKTTYAITSYNQPIPPDCTLNYALGAGPQLL PQLTSQAEGFTDSVDGQVIRDAIGSRQPNARSAVGITDKGEVIWVLVEQQSATKPGLSLPELADFMEQQGAASALNLDGG SSSSLVYQDQVITGRSLQGEPLLRPVKSVLMVLENAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30202; Mature: 30070
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGFCTAPSQLSPQPQQPPPTMQYQKQELSQATVHVLRIPNHPRYTVRLDVVDGLQTVA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHHHHH DFAQGTPKPVAVINGGYFDPANQLTTSYIRRGGQILADPTQNSRLVDNPDLKVYLPKILN HHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCEEECCCCCEEEEHHHCC RSEFRQYQCGAKTTYAITSYNQPIPPDCTLNYALGAGPQLLPQLTSQAEGFTDSVDGQVI HHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHH RDAIGSRQPNARSAVGITDKGEVIWVLVEQQSATKPGLSLPELADFMEQQGAASALNLDG HHHHCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCC GSSSSLVYQDQVITGRSLQGEPLLRPVKSVLMVLENAPK CCCCCEEEECEEECCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GLGFCTAPSQLSPQPQQPPPTMQYQKQELSQATVHVLRIPNHPRYTVRLDVVDGLQTVA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHHHHH DFAQGTPKPVAVINGGYFDPANQLTTSYIRRGGQILADPTQNSRLVDNPDLKVYLPKILN HHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCEEECCCCCEEEEHHHCC RSEFRQYQCGAKTTYAITSYNQPIPPDCTLNYALGAGPQLLPQLTSQAEGFTDSVDGQVI HHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHH RDAIGSRQPNARSAVGITDKGEVIWVLVEQQSATKPGLSLPELADFMEQQGAASALNLDG HHHHCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCC GSSSSLVYQDQVITGRSLQGEPLLRPVKSVLMVLENAPK CCCCCEEEECEEECCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA