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The map label for this gene is 158338402

Identifier: 158338402

GI number: 158338402

Start: 5364089

End: 5365369

Strand: Direct

Name: 158338402

Synonym: AM1_5302

Alternate gene names: NA

Gene position: 5364089-5365369 (Clockwise)

Preceding gene: 158338398

Following gene: 158338403

Centisome position: 82.48

GC content: 48.24

Gene sequence:

>1281_bases
GTGATTCCTCCAGAGTTCTTGAGTGACTTAGCCACTCAACAGGGTGTATCCAAATCTGAATTAGCGGCTCTCAAACTTGG
ACTAGCCGGGTATTCCACCGCTGATATTGGCGAACAGCTTGGAATTAGTGGGGATGCAGCCCGCAAACGCCTCAGTGAGG
TCTATCAGAAATTTGGGATTGCTGGCCGAGGTCCCGTTAAACTCACAAAGCTGCAGCAACTCCTGGTGACGCGTTACCAA
GAAGCCCTTGAAAAGGGAACGGCTGTAAAAGCTGCCGAGCTAGAGCAGGTAGATTGGGGCAATGCCCCCGATGTATCCGT
GTTTTATGGGCGTACTGCAGAGTTAGAACAACTAGAGCGATGGATTATCCAAGATCGGTATCGCTTACTGGCGCTTTATG
GGATTTCTGGGATTGGCAAAACCACCCTTTCGGTTAAGTTAACTCAACGACTGCAACCTCACTTTGAGAAAATTTTTTGG
CGGTCGCTGTACTATGCGCCACTCCTGCAAGATTTACTGATTGAGCTGACGACCTTTCTCCACGGTTCACCATTAGACCC
TGCTCTGGCGACGGTATCTGAGCAAATGGATTGGGTGATGGATTACCTCCAACATCATCGGTGTCTGCTCGTCTTAAATG
GCTTAGAATCCTTTAGCCGTAAGGGAGACTTGGCGGGGAGTTACCAACCGAATTACGAAAACTACAGTCAATGGATTCAT
CTAGTGGGAACGGTGCCCCATCAAAGCTGTGTGGTGACGACGAGCCAGGAGAAACTCGGTGAGGTCGCCTATCTAGAGGG
CCAAACCTTACCAGTCGGTTCTTTTAAGTTGCGGGGGTTGGAATTGGAGCAAGCGAAAGCGATTCTCCAAAACAAGGGAC
TGACGGGAGAAGATAAATGGCAATATCTAGTGGATGGGTATCGGGGCAATCCGATGATGCTGAAGCTGGTCGCCGAAACC
ATCAAGGAAGTCTTTGGTGGCAATGTCGGTGACTTCTTAGATACCAGCTTGTTTACCAGAGATATTCACAATTTTATCGA
GCGAATTTTTGACCGGGTTTCAGATTTAGAACGACAAATTTTATATATCCTCGCGGAGCAAAATGACGGGTTAAGTTTTA
AGCAACTGCAAACCCAACTCTCCAGTATCAATGCTCAAGACCTAATGAGTGCCCTTTCCTCCCTTCGTCAGCGGTCTCTG
ATTGAACATGTGGATCAGGGGTTTATCCTGCCGCCAGTGATCAAAGAGGTCACCCAACAAATTATGGTGTCTGAAGCCTA
A

Upstream 100 bases:

>100_bases
GGAGGTAAAGGGATGCTCACATAATTGAGATTTGCCTCATATAAAAGTTGTGAATTAGAGATAGAATGAGGAAGATCATT
ATTTATGTGAGTTTATTGGA

Downstream 100 bases:

>100_bases
TCGATAGATGGTGTATTGTCCCAATCCTAAGTGTAAACAGCGGCAAAATCCTGCAACGGCGGAGATCTGTCAAAGTTGCG
AAACACCATTAATTCTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MIPPEFLSDLATQQGVSKSELAALKLGLAGYSTADIGEQLGISGDAARKRLSEVYQKFGIAGRGPVKLTKLQQLLVTRYQ
EALEKGTAVKAAELEQVDWGNAPDVSVFYGRTAELEQLERWIIQDRYRLLALYGISGIGKTTLSVKLTQRLQPHFEKIFW
RSLYYAPLLQDLLIELTTFLHGSPLDPALATVSEQMDWVMDYLQHHRCLLVLNGLESFSRKGDLAGSYQPNYENYSQWIH
LVGTVPHQSCVVTTSQEKLGEVAYLEGQTLPVGSFKLRGLELEQAKAILQNKGLTGEDKWQYLVDGYRGNPMMLKLVAET
IKEVFGGNVGDFLDTSLFTRDIHNFIERIFDRVSDLERQILYILAEQNDGLSFKQLQTQLSSINAQDLMSALSSLRQRSL
IEHVDQGFILPPVIKEVTQQIMVSEA

Sequences:

>Translated_426_residues
MIPPEFLSDLATQQGVSKSELAALKLGLAGYSTADIGEQLGISGDAARKRLSEVYQKFGIAGRGPVKLTKLQQLLVTRYQ
EALEKGTAVKAAELEQVDWGNAPDVSVFYGRTAELEQLERWIIQDRYRLLALYGISGIGKTTLSVKLTQRLQPHFEKIFW
RSLYYAPLLQDLLIELTTFLHGSPLDPALATVSEQMDWVMDYLQHHRCLLVLNGLESFSRKGDLAGSYQPNYENYSQWIH
LVGTVPHQSCVVTTSQEKLGEVAYLEGQTLPVGSFKLRGLELEQAKAILQNKGLTGEDKWQYLVDGYRGNPMMLKLVAET
IKEVFGGNVGDFLDTSLFTRDIHNFIERIFDRVSDLERQILYILAEQNDGLSFKQLQTQLSSINAQDLMSALSSLRQRSL
IEHVDQGFILPPVIKEVTQQIMVSEA
>Mature_426_residues
MIPPEFLSDLATQQGVSKSELAALKLGLAGYSTADIGEQLGISGDAARKRLSEVYQKFGIAGRGPVKLTKLQQLLVTRYQ
EALEKGTAVKAAELEQVDWGNAPDVSVFYGRTAELEQLERWIIQDRYRLLALYGISGIGKTTLSVKLTQRLQPHFEKIFW
RSLYYAPLLQDLLIELTTFLHGSPLDPALATVSEQMDWVMDYLQHHRCLLVLNGLESFSRKGDLAGSYQPNYENYSQWIH
LVGTVPHQSCVVTTSQEKLGEVAYLEGQTLPVGSFKLRGLELEQAKAILQNKGLTGEDKWQYLVDGYRGNPMMLKLVAET
IKEVFGGNVGDFLDTSLFTRDIHNFIERIFDRVSDLERQILYILAEQNDGLSFKQLQTQLSSINAQDLMSALSSLRQRSL
IEHVDQGFILPPVIKEVTQQIMVSEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 47857; Mature: 47857

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPPEFLSDLATQQGVSKSELAALKLGLAGYSTADIGEQLGISGDAARKRLSEVYQKFGI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
AGRGPVKLTKLQQLLVTRYQEALEKGTAVKAAELEQVDWGNAPDVSVFYGRTAELEQLER
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHH
WIIQDRYRLLALYGISGIGKTTLSVKLTQRLQPHFEKIFWRSLYYAPLLQDLLIELTTFL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGSPLDPALATVSEQMDWVMDYLQHHRCLLVLNGLESFSRKGDLAGSYQPNYENYSQWIH
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LVGTVPHQSCVVTTSQEKLGEVAYLEGQTLPVGSFKLRGLELEQAKAILQNKGLTGEDKW
HHCCCCCCCEEEECCHHHHCCEEEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCH
QYLVDGYRGNPMMLKLVAETIKEVFGGNVGDFLDTSLFTRDIHNFIERIFDRVSDLERQI
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYILAEQNDGLSFKQLQTQLSSINAQDLMSALSSLRQRSLIEHVDQGFILPPVIKEVTQQ
HHHEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IMVSEA
HHHCCC
>Mature Secondary Structure
MIPPEFLSDLATQQGVSKSELAALKLGLAGYSTADIGEQLGISGDAARKRLSEVYQKFGI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
AGRGPVKLTKLQQLLVTRYQEALEKGTAVKAAELEQVDWGNAPDVSVFYGRTAELEQLER
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHH
WIIQDRYRLLALYGISGIGKTTLSVKLTQRLQPHFEKIFWRSLYYAPLLQDLLIELTTFL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGSPLDPALATVSEQMDWVMDYLQHHRCLLVLNGLESFSRKGDLAGSYQPNYENYSQWIH
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LVGTVPHQSCVVTTSQEKLGEVAYLEGQTLPVGSFKLRGLELEQAKAILQNKGLTGEDKW
HHCCCCCCCEEEECCHHHHCCEEEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCH
QYLVDGYRGNPMMLKLVAETIKEVFGGNVGDFLDTSLFTRDIHNFIERIFDRVSDLERQI
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYILAEQNDGLSFKQLQTQLSSINAQDLMSALSSLRQRSLIEHVDQGFILPPVIKEVTQQ
HHHEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IMVSEA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]