| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is recG [H]
Identifier: 158338329
GI number: 158338329
Start: 5288252
End: 5290708
Strand: Reverse
Name: recG [H]
Synonym: AM1_5225
Alternate gene names: 158338329
Gene position: 5290708-5288252 (Counterclockwise)
Preceding gene: 158338330
Following gene: 158338328
Centisome position: 81.35
GC content: 53.68
Gene sequence:
>2457_bases GTGTCCACCACCAACCTTCCCGATTGGGTGAGGTTGCAACAGGCTCTCTCTGTAGAAGCGGATCGCGGATTTTGTGACCT AGAAGGCAAGCAATTTCGCTTTAGTCAATTTCTCCAACAGAGTTTGGCCAGCACGGTCCCGCCCCATTCCGAGTCTGCGG TACAAGAACGGTGGCAGTCTACGGCTCAGAAGTTTGGCGGTTACGCAGACCTGACCCTGAATCAGCGCCAGCACCTAGTG GCTGAAACTCGACGTCTTCTTTATTCCACCCAGAAAGACTACCGTCAGGCCACAGATCCGCCCCCCAAGCCCCGGAAGCC AGCCACCCAAAAACTCAAGGCCACCCCCCAGAAACTATCCCTCGATCTGCCCATTCTGTCTTTGTCTGGAATTGGCCCTA AAAGCGCTCAGAAATTAGAGAAGCTAGGGCTGTTTAGCGTGCGGGATTTACTGTTCTACTATCCCCGTGACCATATTGAC TATGCCCGCCAGGTGTCGATTCGGGACCTAGAGGAAGGGGCAACGGTTACCTTGGTGGCGACGGTACGGCGGGTGAATTG CTTTAGTAGTCCCCGCAATCCCAAGCTCACCATCTTTGAGCTAGTGGTCAAAGACGCCACGGGCCAGTTAAAACTCAGCC GCTTCTATGCCGGCAATCGGTTTCGCAGTCGAGGTTGGCAAGAACAACAAAAGCGTCTTTACCCTCCTGGAGCGGTGGTG GCAGCTTCTGGTTTGGTTAAAAGCAGCAAGTATGGCATCACCCTAGATAACCCTGACCTGGAGGTGCTTAACCATTCTGG GGACAAAATTGAGTCCATGGTCATTGGTCGAGTGGTGCCCATCTATGCTCTGACGGAAGGGGTCACCCCGGATCTGGTAC GGCGAGCGGTGGTGGCAGCCTTGCCTGCTGCAAAAAGCCTCCGCGATCCGTTACCAGAGGGCCTGCGGCAGCAGAATAAT TTGACGGATTTGCCGAGTGCGATCGCAGATGTGCATTTCCCCCCCGATAGTGATGCCCTAGATCGAGCCCGCCACCGCTT AATCTTCGATGAATTCTTCTATCTGCAGCTTGGGATGCTAGTCCGCCGCCAACAGCAGCGCCAGACCCAAGAAAGTGTGC CCTTAAGCGTGCATGGGGAATTACTGGAACGGTTCTATGAGGTATTGCCCTTTACCCTAACCGGGGCGCAAAAGCGAGTT GTTCAAGATATTTTGGCGGATTTGCAATCTACTCAGCCGATGAACCGCCTGGTTCAAGGGGATGTGGGGTCAGGTAAAAC CGTAGTGGCGGTGATTGCCCTTCTATCAGCCATTCAATCTGGGTATCAAACCGCCCTGATGGCCCCCACGGAAGTTCTGG CTGAGCAGCATTATCATAAGCTCGTGGAATGGTTTAACCAGCTGCATCTACCCGTTGATTTGCTGACGGGCTCCACCAAA GCAGCCAAACGCCGACAAATTGCTGAACAGCTCAAAACAGGGGAACTACCCTTACTCGTCGGCACCCATGCCCTGATTCA AGACAACGTGGAGTTTGATCGCTTGGGTTTAGCTGTCATTGACGAACAACATCGCTTTGGCGTCCAGCAGCGAGCCCTGC TGCAGCAAAAAGGTCAGCATCCCCATGTGCTCACCATGACTGCCACCCCTATTCCCCGCACCCTGGCCCTAACCCTCCAT GGCGACCTGGATGTCAGTCAGATTGACGAGCTGCCACCGGGACGACAGGCGATTCAGACGACGATGCTAACGACCCGCGA TCGTGCCCATGCCTACGACCTCATGCGACGGGAAATCGCCCAGGGACGGCAAATTTATATTGTCTTACCCCTAGTAGAGG AATCTGAAAAACTCGATCTGCGCTCAGCGGTGCAAGAGCATGATCGTCTTCAAACCACCATTTTCCCCAACTTCCAGGTG GGGCTGCTGCATGGACGGCTCACTTCGGCGGAAAAAGAGGAGGTGATTTCCCAGTTCCGGGAGCATACGCTGCATATTTT GGTTTCAACCACTGTAGTGGAAGTGGGCGTCGATATTCCCAATGCCACGGTGATGTTAATTGAACATGCCGATCGGTTTG GCCTATCCCAGCTCCATCAGCTCCGAGGTCGAGTCGGTCGAGGAGCCCATCAATCCTATTGCCTACTGATGAATAGTTCC AAAACGGAAACGGCTCGCCAGCGGTTAGCAGTATTGGAGCAGTCCCAAGATGGCTTTTTTATTGCCGAAATGGATCTCCG CTTTCGGGGGCCAGGGGAAGTTCTAGGCACCCGCCAATCGGGGCTGCCTGATCTCGCCCTAGCCAGCTTAGTGGACGATC AAGAGACCTTAGAATTAGCCCGTCAAGCGGCTGAAAAAGTTTTGGAAAAAGACAGCACTTTAGGGGCTTGGCCCCTGATG CAATCCGAATTAAATCTTCGCTATCAAAAACTCATGGGTGGAGCAATTTTTACATAG
Upstream 100 bases:
>100_bases GAGCTGTTGCCATCTGCCATGAACCGATCTCAAGATCTCCATTGATCATTACAATGGGGGCAATATCGCTGCAACGTCTA TGGGTGATTCTGTTCCAGTT
Downstream 100 bases:
>100_bases ATTTGCAACAATGCAATTTTATGGGTATCATAAGTTATTATCATGTGTGTGCTCCGGGGATCCGCGACTTTAGACTCCGT AATTGTCGTTCCCGGGGCAA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 818; Mature: 817
Protein sequence:
>818_residues MSTTNLPDWVRLQQALSVEADRGFCDLEGKQFRFSQFLQQSLASTVPPHSESAVQERWQSTAQKFGGYADLTLNQRQHLV AETRRLLYSTQKDYRQATDPPPKPRKPATQKLKATPQKLSLDLPILSLSGIGPKSAQKLEKLGLFSVRDLLFYYPRDHID YARQVSIRDLEEGATVTLVATVRRVNCFSSPRNPKLTIFELVVKDATGQLKLSRFYAGNRFRSRGWQEQQKRLYPPGAVV AASGLVKSSKYGITLDNPDLEVLNHSGDKIESMVIGRVVPIYALTEGVTPDLVRRAVVAALPAAKSLRDPLPEGLRQQNN LTDLPSAIADVHFPPDSDALDRARHRLIFDEFFYLQLGMLVRRQQQRQTQESVPLSVHGELLERFYEVLPFTLTGAQKRV VQDILADLQSTQPMNRLVQGDVGSGKTVVAVIALLSAIQSGYQTALMAPTEVLAEQHYHKLVEWFNQLHLPVDLLTGSTK AAKRRQIAEQLKTGELPLLVGTHALIQDNVEFDRLGLAVIDEQHRFGVQQRALLQQKGQHPHVLTMTATPIPRTLALTLH GDLDVSQIDELPPGRQAIQTTMLTTRDRAHAYDLMRREIAQGRQIYIVLPLVEESEKLDLRSAVQEHDRLQTTIFPNFQV GLLHGRLTSAEKEEVISQFREHTLHILVSTTVVEVGVDIPNATVMLIEHADRFGLSQLHQLRGRVGRGAHQSYCLLMNSS KTETARQRLAVLEQSQDGFFIAEMDLRFRGPGEVLGTRQSGLPDLALASLVDDQETLELARQAAEKVLEKDSTLGAWPLM QSELNLRYQKLMGGAIFT
Sequences:
>Translated_818_residues MSTTNLPDWVRLQQALSVEADRGFCDLEGKQFRFSQFLQQSLASTVPPHSESAVQERWQSTAQKFGGYADLTLNQRQHLV AETRRLLYSTQKDYRQATDPPPKPRKPATQKLKATPQKLSLDLPILSLSGIGPKSAQKLEKLGLFSVRDLLFYYPRDHID YARQVSIRDLEEGATVTLVATVRRVNCFSSPRNPKLTIFELVVKDATGQLKLSRFYAGNRFRSRGWQEQQKRLYPPGAVV AASGLVKSSKYGITLDNPDLEVLNHSGDKIESMVIGRVVPIYALTEGVTPDLVRRAVVAALPAAKSLRDPLPEGLRQQNN LTDLPSAIADVHFPPDSDALDRARHRLIFDEFFYLQLGMLVRRQQQRQTQESVPLSVHGELLERFYEVLPFTLTGAQKRV VQDILADLQSTQPMNRLVQGDVGSGKTVVAVIALLSAIQSGYQTALMAPTEVLAEQHYHKLVEWFNQLHLPVDLLTGSTK AAKRRQIAEQLKTGELPLLVGTHALIQDNVEFDRLGLAVIDEQHRFGVQQRALLQQKGQHPHVLTMTATPIPRTLALTLH GDLDVSQIDELPPGRQAIQTTMLTTRDRAHAYDLMRREIAQGRQIYIVLPLVEESEKLDLRSAVQEHDRLQTTIFPNFQV GLLHGRLTSAEKEEVISQFREHTLHILVSTTVVEVGVDIPNATVMLIEHADRFGLSQLHQLRGRVGRGAHQSYCLLMNSS KTETARQRLAVLEQSQDGFFIAEMDLRFRGPGEVLGTRQSGLPDLALASLVDDQETLELARQAAEKVLEKDSTLGAWPLM QSELNLRYQKLMGGAIFT >Mature_817_residues STTNLPDWVRLQQALSVEADRGFCDLEGKQFRFSQFLQQSLASTVPPHSESAVQERWQSTAQKFGGYADLTLNQRQHLVA ETRRLLYSTQKDYRQATDPPPKPRKPATQKLKATPQKLSLDLPILSLSGIGPKSAQKLEKLGLFSVRDLLFYYPRDHIDY ARQVSIRDLEEGATVTLVATVRRVNCFSSPRNPKLTIFELVVKDATGQLKLSRFYAGNRFRSRGWQEQQKRLYPPGAVVA ASGLVKSSKYGITLDNPDLEVLNHSGDKIESMVIGRVVPIYALTEGVTPDLVRRAVVAALPAAKSLRDPLPEGLRQQNNL TDLPSAIADVHFPPDSDALDRARHRLIFDEFFYLQLGMLVRRQQQRQTQESVPLSVHGELLERFYEVLPFTLTGAQKRVV QDILADLQSTQPMNRLVQGDVGSGKTVVAVIALLSAIQSGYQTALMAPTEVLAEQHYHKLVEWFNQLHLPVDLLTGSTKA AKRRQIAEQLKTGELPLLVGTHALIQDNVEFDRLGLAVIDEQHRFGVQQRALLQQKGQHPHVLTMTATPIPRTLALTLHG DLDVSQIDELPPGRQAIQTTMLTTRDRAHAYDLMRREIAQGRQIYIVLPLVEESEKLDLRSAVQEHDRLQTTIFPNFQVG LLHGRLTSAEKEEVISQFREHTLHILVSTTVVEVGVDIPNATVMLIEHADRFGLSQLHQLRGRVGRGAHQSYCLLMNSSK TETARQRLAVLEQSQDGFFIAEMDLRFRGPGEVLGTRQSGLPDLALASLVDDQETLELARQAAEKVLEKDSTLGAWPLMQ SELNLRYQKLMGGAIFT
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=683, Percent_Identity=41.5812591508053, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1787357, Length=402, Percent_Identity=36.5671641791045, Blast_Score=259, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 91684; Mature: 91553
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTNLPDWVRLQQALSVEADRGFCDLEGKQFRFSQFLQQSLASTVPPHSESAVQERWQS CCCCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TAQKFGGYADLTLNQRQHLVAETRRLLYSTQKDYRQATDPPPKPRKPATQKLKATPQKLS HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHE LDLPILSLSGIGPKSAQKLEKLGLFSVRDLLFYYPRDHIDYARQVSIRDLEEGATVTLVA ECCCEEEECCCCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEH TVRRVNCFSSPRNPKLTIFELVVKDATGQLKLSRFYAGNRFRSRGWQEQQKRLYPPGAVV HHHHHHHCCCCCCCCEEEEHHHHHCCCCCEEEEHHHCCCCHHHCCCHHHHHHCCCCCHHH AASGLVKSSKYGITLDNPDLEVLNHSGDKIESMVIGRVVPIYALTEGVTPDLVRRAVVAA HHHHHHCCCCCCEEECCCCHHEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LPAAKSLRDPLPEGLRQQNNLTDLPSAIADVHFPPDSDALDRARHRLIFDEFFYLQLGML HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRRQQQRQTQESVPLSVHGELLERFYEVLPFTLTGAQKRVVQDILADLQSTQPMNRLVQG HHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCC DVGSGKTVVAVIALLSAIQSGYQTALMAPTEVLAEQHYHKLVEWFNQLHLPVDLLTGSTK CCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHH AAKRRQIAEQLKTGELPLLVGTHALIQDNVEFDRLGLAVIDEQHRFGVQQRALLQQKGQH HHHHHHHHHHHHCCCCCEEECCHHHHHCCCCHHHCCHHEECCHHHHCHHHHHHHHHCCCC PHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQAIQTTMLTTRDRAHAYDLMRREIA CEEEEEECCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH QGRQIYIVLPLVEESEKLDLRSAVQEHDRLQTTIFPNFQVGLLHGRLTSAEKEEVISQFR CCCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHHH EHTLHILVSTTVVEVGVDIPNATVMLIEHADRFGLSQLHQLRGRVGRGAHQSYCLLMNSS HHHHHHEEEHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC KTETARQRLAVLEQSQDGFFIAEMDLRFRGPGEVLGTRQSGLPDLALASLVDDQETLELA CHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHCCCCCCCCCHHHHHHHHCCHHHHHHH RQAAEKVLEKDSTLGAWPLMQSELNLRYQKLMGGAIFT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STTNLPDWVRLQQALSVEADRGFCDLEGKQFRFSQFLQQSLASTVPPHSESAVQERWQS CCCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TAQKFGGYADLTLNQRQHLVAETRRLLYSTQKDYRQATDPPPKPRKPATQKLKATPQKLS HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHE LDLPILSLSGIGPKSAQKLEKLGLFSVRDLLFYYPRDHIDYARQVSIRDLEEGATVTLVA ECCCEEEECCCCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEH TVRRVNCFSSPRNPKLTIFELVVKDATGQLKLSRFYAGNRFRSRGWQEQQKRLYPPGAVV HHHHHHHCCCCCCCCEEEEHHHHHCCCCCEEEEHHHCCCCHHHCCCHHHHHHCCCCCHHH AASGLVKSSKYGITLDNPDLEVLNHSGDKIESMVIGRVVPIYALTEGVTPDLVRRAVVAA HHHHHHCCCCCCEEECCCCHHEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LPAAKSLRDPLPEGLRQQNNLTDLPSAIADVHFPPDSDALDRARHRLIFDEFFYLQLGML HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRRQQQRQTQESVPLSVHGELLERFYEVLPFTLTGAQKRVVQDILADLQSTQPMNRLVQG HHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCC DVGSGKTVVAVIALLSAIQSGYQTALMAPTEVLAEQHYHKLVEWFNQLHLPVDLLTGSTK CCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHH AAKRRQIAEQLKTGELPLLVGTHALIQDNVEFDRLGLAVIDEQHRFGVQQRALLQQKGQH HHHHHHHHHHHHCCCCCEEECCHHHHHCCCCHHHCCHHEECCHHHHCHHHHHHHHHCCCC PHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQAIQTTMLTTRDRAHAYDLMRREIA CEEEEEECCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH QGRQIYIVLPLVEESEKLDLRSAVQEHDRLQTTIFPNFQVGLLHGRLTSAEKEEVISQFR CCCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHHH EHTLHILVSTTVVEVGVDIPNATVMLIEHADRFGLSQLHQLRGRVGRGAHQSYCLLMNSS HHHHHHEEEHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC KTETARQRLAVLEQSQDGFFIAEMDLRFRGPGEVLGTRQSGLPDLALASLVDDQETLELA CHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHCCCCCCCCCHHHHHHHHCCHHHHHHH RQAAEKVLEKDSTLGAWPLMQSELNLRYQKLMGGAIFT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]