| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338311
Identifier: 158338311
GI number: 158338311
Start: 5267616
End: 5269301
Strand: Reverse
Name: 158338311
Synonym: AM1_5207
Alternate gene names: NA
Gene position: 5269301-5267616 (Counterclockwise)
Preceding gene: 158338313
Following gene: 158338308
Centisome position: 81.02
GC content: 51.54
Gene sequence:
>1686_bases ATGGTTCGAGAGCAACACAAACAGGCCACCAATGTGATTGGCACGGTCAAAGGACCGGGAGAAAGTGGAAACCAGTATGT GTTTATCACCGCCGATACCCAACACATCAAAATTGGCGAGTTTGTGTCCTATCGCCTCACCCATACCGACAATGTCCCGG TCGAAATATTAGGTAAGATTTCAGCCTGCATCCTCGTGGATCATCTGCCGGATCGCATCTTTGCTGATACCGAAATCGAC CCTAGCGCCATTGCTTCTCTGATCGGCTTTAAATACTCCAGCCCCGAAATCTATGAAGTCGCTGTGGATGTGATCGGCTA CTTCCACCCCAATCTTGGGTTTATGAACCCTCGCCAGCCCCCCGAGCCAGGGGCTAAAGTGTATCGTGCCGATGATCCGA CCCTGCGGCGAATTCTGAATAAACGCCAAGTGGGGGACGTGGGCTCAGCCACCATTGGGTCATTACTGCTGCGAGATTTG GAAGCCGTTCCCATTAGCCTCGATGTCAAAGCTCTTGTTAGTACCCATATGGCAATTTTGGCGGGGACAGGCTCCGGTAA ATCCTATACCGCTGGCGTCCTGATCGAAGAACTGCTCCGCCCCTATAATCGGGCAGCTGTGCTAATTTTTGACCCCCACG GTGAATATGGCACCTTAGAGGCGATGCGCGGTCATCCTGCCTTTAGCAGCGAAGATGGCTATGCCCCCCAGGTCCAAATT CTCACCCCGGAGCAGATCACCATTCGGATCTCCTCTCTTAACTATGCCGATATCAAAATGCTGCTGCCAGAGATGAGTGA GCGCCAGCAAGCCATCCTCAACAAAGCCTTTAACAATCTCCAGGCTCGGAAACGAAAAAATGCCCGTTGGGATATCAATG ACTTGATTTATGAGGTCAATGAAGCCGACGTTATTCAAGATAAAAACGGTAATGAGCAGCCCGGTTCTTCCGCCCAAGCT CTGGAATGGAAGCTAGAAAAGCTTGCGAATTCTCCCTATTTCCATGCCTTTGAGCACCTGACCCCGCAAGATTTATTTGA GCCGGGGCAGGTGACCGTTCTGCAAATGAACGAAATTAGCCAAGAAGAACAGCAGGTGATTTGTGCGGCCATCCTTCGCC AGGCTAACCAAGCCCGCATGAATACCCTGAAAGAAAAAATTACAGCCGAAGACGAAAACTATCTTCCCTATCCGGTGTTT ATTCTGCTGGAGGAAGCTCATCGTTTTGCACCGGCCCATGAGCCCTCCCGCTGCAAAGCCGTTATTCGCACCATCCTCAG TGAAGGCCGCAAATTCGGTTTAGGGGTGGGGTTGATTACTCAACGTCCTGGCAAACTGGATTCAGATGTCTTGTCCCAAT GCATGAGCCAGTTCATTATGCGCATCGTCAATCCAGTCGATCAAGACAGCCTTAAATATGGTGTGGAAGCGGCGGGTCGC GATTTGTTGAAAGAATTGCCTGCTTTGACTAAAGGCCAGGTGATTATCTCAGGTATGTGTGTCAACACCCCTGTCTTATG CCAAGTGCGCCAACGCTTAACCGCCCATGGTGGAGAAACCCTAGATGCCCCTTCCCTATGGCAAGCCCATTTCCAATCCC ATCGTCTACGGGAACGAGCTGCCGCCAGTGCCCCTCTAGCTGGGCGGCGACAAGCTGCTACAGTGCGCGGGGTTTCGATT GATTAG
Upstream 100 bases:
>100_bases GTTCTGTACGCTTTGGGGCCCAGGATAAGGAATAAAGGTGTCAATTTAGCATCCCTCGTATACCATGTAGCCAACAGAAA GCGGTTTGTGGACAGGGTTT
Downstream 100 bases:
>100_bases AGCTATCTAAGGGAATTCCCAAAATATTCAGGAGCATTAGGCGTCTGGGAACCGAGGGAAGCTGAGGGAAGCCTGGTCCA TCCGGGCGGCCCTACTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MVREQHKQATNVIGTVKGPGESGNQYVFITADTQHIKIGEFVSYRLTHTDNVPVEILGKISACILVDHLPDRIFADTEID PSAIASLIGFKYSSPEIYEVAVDVIGYFHPNLGFMNPRQPPEPGAKVYRADDPTLRRILNKRQVGDVGSATIGSLLLRDL EAVPISLDVKALVSTHMAILAGTGSGKSYTAGVLIEELLRPYNRAAVLIFDPHGEYGTLEAMRGHPAFSSEDGYAPQVQI LTPEQITIRISSLNYADIKMLLPEMSERQQAILNKAFNNLQARKRKNARWDINDLIYEVNEADVIQDKNGNEQPGSSAQA LEWKLEKLANSPYFHAFEHLTPQDLFEPGQVTVLQMNEISQEEQQVICAAILRQANQARMNTLKEKITAEDENYLPYPVF ILLEEAHRFAPAHEPSRCKAVIRTILSEGRKFGLGVGLITQRPGKLDSDVLSQCMSQFIMRIVNPVDQDSLKYGVEAAGR DLLKELPALTKGQVIISGMCVNTPVLCQVRQRLTAHGGETLDAPSLWQAHFQSHRLRERAAASAPLAGRRQAATVRGVSI D
Sequences:
>Translated_561_residues MVREQHKQATNVIGTVKGPGESGNQYVFITADTQHIKIGEFVSYRLTHTDNVPVEILGKISACILVDHLPDRIFADTEID PSAIASLIGFKYSSPEIYEVAVDVIGYFHPNLGFMNPRQPPEPGAKVYRADDPTLRRILNKRQVGDVGSATIGSLLLRDL EAVPISLDVKALVSTHMAILAGTGSGKSYTAGVLIEELLRPYNRAAVLIFDPHGEYGTLEAMRGHPAFSSEDGYAPQVQI LTPEQITIRISSLNYADIKMLLPEMSERQQAILNKAFNNLQARKRKNARWDINDLIYEVNEADVIQDKNGNEQPGSSAQA LEWKLEKLANSPYFHAFEHLTPQDLFEPGQVTVLQMNEISQEEQQVICAAILRQANQARMNTLKEKITAEDENYLPYPVF ILLEEAHRFAPAHEPSRCKAVIRTILSEGRKFGLGVGLITQRPGKLDSDVLSQCMSQFIMRIVNPVDQDSLKYGVEAAGR DLLKELPALTKGQVIISGMCVNTPVLCQVRQRLTAHGGETLDAPSLWQAHFQSHRLRERAAASAPLAGRRQAATVRGVSI D >Mature_561_residues MVREQHKQATNVIGTVKGPGESGNQYVFITADTQHIKIGEFVSYRLTHTDNVPVEILGKISACILVDHLPDRIFADTEID PSAIASLIGFKYSSPEIYEVAVDVIGYFHPNLGFMNPRQPPEPGAKVYRADDPTLRRILNKRQVGDVGSATIGSLLLRDL EAVPISLDVKALVSTHMAILAGTGSGKSYTAGVLIEELLRPYNRAAVLIFDPHGEYGTLEAMRGHPAFSSEDGYAPQVQI LTPEQITIRISSLNYADIKMLLPEMSERQQAILNKAFNNLQARKRKNARWDINDLIYEVNEADVIQDKNGNEQPGSSAQA LEWKLEKLANSPYFHAFEHLTPQDLFEPGQVTVLQMNEISQEEQQVICAAILRQANQARMNTLKEKITAEDENYLPYPVF ILLEEAHRFAPAHEPSRCKAVIRTILSEGRKFGLGVGLITQRPGKLDSDVLSQCMSQFIMRIVNPVDQDSLKYGVEAAGR DLLKELPALTKGQVIISGMCVNTPVLCQVRQRLTAHGGETLDAPSLWQAHFQSHRLRERAAASAPLAGRRQAATVRGVSI D
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 62112; Mature: 62112
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVREQHKQATNVIGTVKGPGESGNQYVFITADTQHIKIGEFVSYRLTHTDNVPVEILGKI CCCHHHHHHHCCEEEECCCCCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCHHHHHHH SACILVDHLPDRIFADTEIDPSAIASLIGFKYSSPEIYEVAVDVIGYFHPNLGFMNPRQP HHHHEECCCCCHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PEPGAKVYRADDPTLRRILNKRQVGDVGSATIGSLLLRDLEAVPISLDVKALVSTHMAIL CCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHCEEEE AGTGSGKSYTAGVLIEELLRPYNRAAVLIFDPHGEYGTLEAMRGHPAFSSEDGYAPQVQI EECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEE LTPEQITIRISSLNYADIKMLLPEMSERQQAILNKAFNNLQARKRKNARWDINDLIYEVN ECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC EADVIQDKNGNEQPGSSAQALEWKLEKLANSPYFHAFEHLTPQDLFEPGQVTVLQMNEIS CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCEEEEEEHHCC QEEQQVICAAILRQANQARMNTLKEKITAEDENYLPYPVFILLEEAHRFAPAHEPSRCKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEHHHHHCCCCCCCHHHHH VIRTILSEGRKFGLGVGLITQRPGKLDSDVLSQCMSQFIMRIVNPVDQDSLKYGVEAAGR HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DLLKELPALTKGQVIISGMCVNTPVLCQVRQRLTAHGGETLDAPSLWQAHFQSHRLRERA HHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AASAPLAGRRQAATVRGVSID HHCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MVREQHKQATNVIGTVKGPGESGNQYVFITADTQHIKIGEFVSYRLTHTDNVPVEILGKI CCCHHHHHHHCCEEEECCCCCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCHHHHHHH SACILVDHLPDRIFADTEIDPSAIASLIGFKYSSPEIYEVAVDVIGYFHPNLGFMNPRQP HHHHEECCCCCHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PEPGAKVYRADDPTLRRILNKRQVGDVGSATIGSLLLRDLEAVPISLDVKALVSTHMAIL CCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHCEEEE AGTGSGKSYTAGVLIEELLRPYNRAAVLIFDPHGEYGTLEAMRGHPAFSSEDGYAPQVQI EECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEE LTPEQITIRISSLNYADIKMLLPEMSERQQAILNKAFNNLQARKRKNARWDINDLIYEVN ECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC EADVIQDKNGNEQPGSSAQALEWKLEKLANSPYFHAFEHLTPQDLFEPGQVTVLQMNEIS CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCEEEEEEHHCC QEEQQVICAAILRQANQARMNTLKEKITAEDENYLPYPVFILLEEAHRFAPAHEPSRCKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEHHHHHCCCCCCCHHHHH VIRTILSEGRKFGLGVGLITQRPGKLDSDVLSQCMSQFIMRIVNPVDQDSLKYGVEAAGR HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DLLKELPALTKGQVIISGMCVNTPVLCQVRQRLTAHGGETLDAPSLWQAHFQSHRLRERA HHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AASAPLAGRRQAATVRGVSID HHCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]