Click here to switch to the map view.

The map label for this gene is 158338250

Identifier: 158338250

GI number: 158338250

Start: 5208973

End: 5209446

Strand: Direct

Name: 158338250

Synonym: AM1_5146

Alternate gene names: NA

Gene position: 5208973-5209446 (Clockwise)

Preceding gene: 158338245

Following gene: 158338251

Centisome position: 80.09

GC content: 50.42

Gene sequence:

>474_bases
ATGAATTTGGCGTCTTTCCCTTGGCTAGAAGCTGAAATAATTCGTCATAGTTTGAGACTAATAAAGAGTTATCAGCACTG
GACAGGAAAACCACTGACAGGGGATGCTCCTTCCCCTGCCGAGATCGCCCATGATTTATTTCATGCCTCTTTTGTACTGC
TATCCCATGGTACAGAGACTGACCCCGTTCTTAATTACGGCAACCAGCCTGCCCTTGATCTCTGGGAAACAACCTGGCCT
GAACTGACTGCGATGCCCTCTCGCTTGACCGCAGAGCCACATGAGCGGCAAAGCCGGACCCAGCTCCTCCACCAAGCCGC
CCAGCAACACTATATTCAGAACTATCAAGGGATCCGGATCTCCACCACGGGCCGCCGATTTAGAATCAGCAATGCGGAAA
TATGGGATATCTGGGATGAGCAAGAGCAAAAATGTGGACAAGCAGCCAAGTTCAGCCACTGGGAATGGCTATAA

Upstream 100 bases:

>100_bases
CAGTAAGTGCCGCCAAAACCAGCCTACTCGATTCTCCCAGCCTTACAGCACTCTAGAAAAAGGCAAAATATCGTTATTAC
ATGCAAAAAGTTGATTAGTT

Downstream 100 bases:

>100_bases
GTCGCTTTATCCCCCCCTCAGGGCGACCGCACATAGAAGTTAACAAAGCCGTCGAATTCGGAAGAGGTGGAGGATAATGC
CTCAAAAACAACGCTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: MEKHLA Domain-Containing Protein; MEKHLA Domain Superfamily Protein; Mekhla Domain Protein; PAS Sensor Protein; Mekhla Domain; MEKHLA Domain Superfamily; Mekhla Domain Superfamily

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNLASFPWLEAEIIRHSLRLIKSYQHWTGKPLTGDAPSPAEIAHDLFHASFVLLSHGTETDPVLNYGNQPALDLWETTWP
ELTAMPSRLTAEPHERQSRTQLLHQAAQQHYIQNYQGIRISTTGRRFRISNAEIWDIWDEQEQKCGQAAKFSHWEWL

Sequences:

>Translated_157_residues
MNLASFPWLEAEIIRHSLRLIKSYQHWTGKPLTGDAPSPAEIAHDLFHASFVLLSHGTETDPVLNYGNQPALDLWETTWP
ELTAMPSRLTAEPHERQSRTQLLHQAAQQHYIQNYQGIRISTTGRRFRISNAEIWDIWDEQEQKCGQAAKFSHWEWL
>Mature_157_residues
MNLASFPWLEAEIIRHSLRLIKSYQHWTGKPLTGDAPSPAEIAHDLFHASFVLLSHGTETDPVLNYGNQPALDLWETTWP
ELTAMPSRLTAEPHERQSRTQLLHQAAQQHYIQNYQGIRISTTGRRFRISNAEIWDIWDEQEQKCGQAAKFSHWEWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18242; Mature: 18242

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLASFPWLEAEIIRHSLRLIKSYQHWTGKPLTGDAPSPAEIAHDLFHASFVLLSHGTET
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
DPVLNYGNQPALDLWETTWPELTAMPSRLTAEPHERQSRTQLLHQAAQQHYIQNYQGIRI
CCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
STTGRRFRISNAEIWDIWDEQEQKCGQAAKFSHWEWL
EECCCEEEECCCEEECCCCHHHHHHCHHHCCCCCCCC
>Mature Secondary Structure
MNLASFPWLEAEIIRHSLRLIKSYQHWTGKPLTGDAPSPAEIAHDLFHASFVLLSHGTET
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
DPVLNYGNQPALDLWETTWPELTAMPSRLTAEPHERQSRTQLLHQAAQQHYIQNYQGIRI
CCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
STTGRRFRISNAEIWDIWDEQEQKCGQAAKFSHWEWL
EECCCEEEECCCEEECCCCHHHHHHCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA