| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338240
Identifier: 158338240
GI number: 158338240
Start: 5198579
End: 5199814
Strand: Reverse
Name: 158338240
Synonym: AM1_5136
Alternate gene names: NA
Gene position: 5199814-5198579 (Counterclockwise)
Preceding gene: 158338242
Following gene: 158338238
Centisome position: 79.95
GC content: 50.0
Gene sequence:
>1236_bases ATGACCAAACTAGCTTATTTCGAGTGCCCTACAGGCATTGCCGGAGATATGTGCTTGGGAGCGCTCTTAGATTTGGGGGT ACCCCTTTCCTTACTCCAAGACTATTTCAGGCGTTTGGACATTGAGCAAGAATTTGAATTACAGGTCAGCGCTGTTCACC GTCAAAGCCAGCAAGCCACCTATGTTCGAGTTGAGCTGGGAGCTGAGCCTGGGCCACCAGGGAAACATCAGCATTCCCAC CACCGGCATTTGCCGGAAATTGAACGTCTGATTTTGAGCGCTGGATTACCTCACCAGGCTGAACGCTGGAGTTTAGATAT TTTCCGAAATTTAGCCCTTGCCGAAGGTAAGGTGCATGGAATTGAACCCAATCGAGTACATTTCCATGAAGTAGGAGCAA CGGATGCCATCGTCGATATTGTTGGCACTTGTTTAGGTCTGCATTGGTTGGGGGTTGAAGAGATGTTTTGTTCAGCCCTC CCCACTGGAGGCGGGACAGTCAAAGCAGCTCATGGAAAATTATCGGTTCCAGTCCCAGCGGTTTTACAGCTTTGGCAAAC GCGACAAGTACCGGTTTATGACAATGGTATTCACAAGGAATTGGTGACGCCAACGGGGGCTGCGATCGCAACCACCCTGG CTCAATCATTTGGGCCTCCTCCCCCCCTGTCTCTCCACCAGATCGGTTTGGGGGCAGGCACCCTGGACTTGTCTTTACCG AATATCCTCCGTATTTGGCTGGGGGAATCGGCAGCATCTCCAGCTTCAGGGACTCACCCTGAAACCGTAACTGTGCTGGA GACGCAAATCGATGACCTCAACCCCCAAGCCTTTGGCTATGTTTTTGATGCCCTGTTTCAAGTTGGGGCGTTAGATGTGT TTACCCAGGCAGTGGGCATGAAAAAGTCCCGGCCTGGCATTCTATTGACGGTGATTTGCCGCCCTGAAACCGTCTCAGCT TGTGAAACGGTGATATTTAAAGAGACGAGTACGCTGGGTATTCGGCGATCGCAACAGCAACGCACCGCTCTACAACGAGA AATTAAAACGATTGATACGGCTTATGGTCCAGTACAGATTAAGCTGGCCTATCATGATCAGCAGTTGGTAAACGTCCAGC CCGAATATGAAGACTGTGCCCAGATTGCCCAAACGCATCATTTATCTTGGCAACAGGTTTATCAGGCGGCTTTATTGGCT TGGTATCAGCAGTCAGAAATTATAGGTGTAAAGTAA
Upstream 100 bases:
>100_bases TTTGTCATCTGGCTTTGTTCCATGAGCAAAACCAGTTGGCTTTCCAGCCATGAGGACAGGTACACTAAAATTCGATGCTC CCGCGCGGGGACTGCCCTCT
Downstream 100 bases:
>100_bases ACCGCAATTAATAGGTGTAATGTCTTGAAAGAGGCGGAGGGTGAGAACGGTTCACCTCAGCTAGACTCAGTTAAGTGAAT CAGTCTTTCAAACTGATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTKLAYFECPTGIAGDMCLGALLDLGVPLSLLQDYFRRLDIEQEFELQVSAVHRQSQQATYVRVELGAEPGPPGKHQHSH HRHLPEIERLILSAGLPHQAERWSLDIFRNLALAEGKVHGIEPNRVHFHEVGATDAIVDIVGTCLGLHWLGVEEMFCSAL PTGGGTVKAAHGKLSVPVPAVLQLWQTRQVPVYDNGIHKELVTPTGAAIATTLAQSFGPPPPLSLHQIGLGAGTLDLSLP NILRIWLGESAASPASGTHPETVTVLETQIDDLNPQAFGYVFDALFQVGALDVFTQAVGMKKSRPGILLTVICRPETVSA CETVIFKETSTLGIRRSQQQRTALQREIKTIDTAYGPVQIKLAYHDQQLVNVQPEYEDCAQIAQTHHLSWQQVYQAALLA WYQQSEIIGVK
Sequences:
>Translated_411_residues MTKLAYFECPTGIAGDMCLGALLDLGVPLSLLQDYFRRLDIEQEFELQVSAVHRQSQQATYVRVELGAEPGPPGKHQHSH HRHLPEIERLILSAGLPHQAERWSLDIFRNLALAEGKVHGIEPNRVHFHEVGATDAIVDIVGTCLGLHWLGVEEMFCSAL PTGGGTVKAAHGKLSVPVPAVLQLWQTRQVPVYDNGIHKELVTPTGAAIATTLAQSFGPPPPLSLHQIGLGAGTLDLSLP NILRIWLGESAASPASGTHPETVTVLETQIDDLNPQAFGYVFDALFQVGALDVFTQAVGMKKSRPGILLTVICRPETVSA CETVIFKETSTLGIRRSQQQRTALQREIKTIDTAYGPVQIKLAYHDQQLVNVQPEYEDCAQIAQTHHLSWQQVYQAALLA WYQQSEIIGVK >Mature_410_residues TKLAYFECPTGIAGDMCLGALLDLGVPLSLLQDYFRRLDIEQEFELQVSAVHRQSQQATYVRVELGAEPGPPGKHQHSHH RHLPEIERLILSAGLPHQAERWSLDIFRNLALAEGKVHGIEPNRVHFHEVGATDAIVDIVGTCLGLHWLGVEEMFCSALP TGGGTVKAAHGKLSVPVPAVLQLWQTRQVPVYDNGIHKELVTPTGAAIATTLAQSFGPPPPLSLHQIGLGAGTLDLSLPN ILRIWLGESAASPASGTHPETVTVLETQIDDLNPQAFGYVFDALFQVGALDVFTQAVGMKKSRPGILLTVICRPETVSAC ETVIFKETSTLGIRRSQQQRTALQREIKTIDTAYGPVQIKLAYHDQQLVNVQPEYEDCAQIAQTHHLSWQQVYQAALLAW YQQSEIIGVK
Specific function: Unknown
COG id: COG1641
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0272 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y5136_ACAM1 (B0C8E3)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001519417.1 - ProteinModelPortal: B0C8E3 - GeneID: 5683932 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_5136 - HOGENOM: HBG733311 - OMA: IVGTCLG - ProtClustDB: PRK04194 - BioCyc: AMAR329726:AM1_5136-MONOMER - HAMAP: MF_01074 - InterPro: IPR002822 - TIGRFAMs: TIGR00299
Pfam domain/function: PF01969 DUF111
EC number: NA
Molecular weight: Translated: 45028; Mature: 44897
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLAYFECPTGIAGDMCLGALLDLGVPLSLLQDYFRRLDIEQEFELQVSAVHRQSQQAT CCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCE YVRVELGAEPGPPGKHQHSHHRHLPEIERLILSAGLPHQAERWSLDIFRNLALAEGKVHG EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEC IEPNRVHFHEVGATDAIVDIVGTCLGLHWLGVEEMFCSALPTGGGTVKAAHGKLSVPVPA CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCHHH VLQLWQTRQVPVYDNGIHKELVTPTGAAIATTLAQSFGPPPPLSLHQIGLGAGTLDLSLP HHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHEECCCCCEEECCCH NILRIWLGESAASPASGTHPETVTVLETQIDDLNPQAFGYVFDALFQVGALDVFTQAVGM HHHHHHHCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC KKSRPGILLTVICRPETVSACETVIFKETSTLGIRRSQQQRTALQREIKTIDTAYGPVQI CCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE KLAYHDQQLVNVQPEYEDCAQIAQTHHLSWQQVYQAALLAWYQQSEIIGVK EEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCC >Mature Secondary Structure TKLAYFECPTGIAGDMCLGALLDLGVPLSLLQDYFRRLDIEQEFELQVSAVHRQSQQAT CCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCE YVRVELGAEPGPPGKHQHSHHRHLPEIERLILSAGLPHQAERWSLDIFRNLALAEGKVHG EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEC IEPNRVHFHEVGATDAIVDIVGTCLGLHWLGVEEMFCSALPTGGGTVKAAHGKLSVPVPA CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCHHH VLQLWQTRQVPVYDNGIHKELVTPTGAAIATTLAQSFGPPPPLSLHQIGLGAGTLDLSLP HHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHEECCCCCEEECCCH NILRIWLGESAASPASGTHPETVTVLETQIDDLNPQAFGYVFDALFQVGALDVFTQAVGM HHHHHHHCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC KKSRPGILLTVICRPETVSACETVIFKETSTLGIRRSQQQRTALQREIKTIDTAYGPVQI CCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE KLAYHDQQLVNVQPEYEDCAQIAQTHHLSWQQVYQAALLAWYQQSEIIGVK EEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA