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The map label for this gene is srpC [H]

Identifier: 158338206

GI number: 158338206

Start: 5154083

End: 5155312

Strand: Reverse

Name: srpC [H]

Synonym: AM1_5100

Alternate gene names: 158338206

Gene position: 5155312-5154083 (Counterclockwise)

Preceding gene: 158338208

Following gene: 158338203

Centisome position: 79.27

GC content: 51.3

Gene sequence:

>1230_bases
ATGGTTCAGTCAGAGATCAAGCCTGCTCCTGGACAACCCCTATCCCAACGCCTCGCTGAGTTGGCCAAAGTCTTCTTAAA
ACTGGGAACCATTGGCTTTGGTGGTCCTCAAGCCCATATCGCTATGGCCAATGATGAAGCTGTGGTTCGTCGTCAATGGC
TGACCTCAGAACAGTTCACAGAAGGGCTGGCTGTTTGTGAAATGCTGCCGGGGCCCGCCTCAACCCAAATGGGCATTTAT
ATTGGCTACGTTCGGGCGGGACAGTTGGGCGCCTTAGTCTCCGGCTTTTGCTTTATTGCACCTGCGTTTTTAATTGTGGT
GGCCTTGGCCTGGGGCTATTTTCGTTTCCAAGGGTTGCCTCAGATTAATGATATTTTTCTGGGGGTTTCCCCCGTCGTAA
TCGCTATTATTCTGGCCTTTTGTTGGAAGCTGGCCAGGAAAACCCTGAAGGATATTGCGGGGATGGGTATTGCGATCGCA
ATCTTTATCCTCACCCTCACCACTGCCATTAACGTCCTGATTCAGTTTATTTTGGCTGGCCTGGTCGGACTCTGGTGGTT
CCGCCCCCGAGGAACCGATTCTCCAATACGGAACTGGTGGATACCGCCAATGCCTTTATTACTGGCCCATCTACCAGCAG
ATACCCTAACTCTCTCTAGCTTTTGGGGACTGGAACGAATCGGTGAATTTCTCCTCCCCCTCACCACCTTTTTCCTGAAG
GTGGGTAGCTTTATCTTTGGGGGTGGGTTAGTGATTATCCCTTTGCTGGAATTTGAAGTGGTCGAGCAGTTGCACTGGCT
AACCCAAACGGAGTTTATTAATGGCGTTGCCATCGGTCAGCTATCGCCAGGTCCAGTAGTGTTAACGGCAGCCTTTGTCG
GCTTTAAGGTGGCAGGAGTTTTAGGCGCGTTGGTATCAACCATCGCCATTTTCGCACCCTCCTTTGCCTTTATTATGCTG
GCAGCCCCATTTCTACTCCGTGCCCGCAAGAATCCTTGGATACAGGCATTTTTAAAGGGAGTTACACCTGCAGTACTGGG
TGCGATCGCAGCCGCGACCCTTCCCCTTCTCAGAACCACCTTGGCCCAACCGACTCTGTTCTATTCCATTATGTCTGGGG
TGATGGGACTACTCGCCTTAGTCGCTTTGATCCGCTACAAAACCCCAACCTGGCTTTTAGTCCCGCTCGGTGCAGTTTTG
GGATTAATCGTTGGATTACTCCCGACCTAA

Upstream 100 bases:

>100_bases
TCACCCCATTAACCGTAACTTAAGCTGCCCCTTGTACAAGTGAGGATGGCTTTCTATCAGCCATATTTTCGAGTGTTTCT
CTTCGTTGTGGGGGCGCCAG

Downstream 100 bases:

>100_bases
AAATGTGAGTTTTGAACCCTTCGCAATGTCTTTACACCCCCACTTCGCTAGCTGCTACCTATAACGATTGGGGCCAGCAG
GACAATTAATCCACCTAAAA

Product: chromate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVQSEIKPAPGQPLSQRLAELAKVFLKLGTIGFGGPQAHIAMANDEAVVRRQWLTSEQFTEGLAVCEMLPGPASTQMGIY
IGYVRAGQLGALVSGFCFIAPAFLIVVALAWGYFRFQGLPQINDIFLGVSPVVIAIILAFCWKLARKTLKDIAGMGIAIA
IFILTLTTAINVLIQFILAGLVGLWWFRPRGTDSPIRNWWIPPMPLLLAHLPADTLTLSSFWGLERIGEFLLPLTTFFLK
VGSFIFGGGLVIIPLLEFEVVEQLHWLTQTEFINGVAIGQLSPGPVVLTAAFVGFKVAGVLGALVSTIAIFAPSFAFIML
AAPFLLRARKNPWIQAFLKGVTPAVLGAIAAATLPLLRTTLAQPTLFYSIMSGVMGLLALVALIRYKTPTWLLVPLGAVL
GLIVGLLPT

Sequences:

>Translated_409_residues
MVQSEIKPAPGQPLSQRLAELAKVFLKLGTIGFGGPQAHIAMANDEAVVRRQWLTSEQFTEGLAVCEMLPGPASTQMGIY
IGYVRAGQLGALVSGFCFIAPAFLIVVALAWGYFRFQGLPQINDIFLGVSPVVIAIILAFCWKLARKTLKDIAGMGIAIA
IFILTLTTAINVLIQFILAGLVGLWWFRPRGTDSPIRNWWIPPMPLLLAHLPADTLTLSSFWGLERIGEFLLPLTTFFLK
VGSFIFGGGLVIIPLLEFEVVEQLHWLTQTEFINGVAIGQLSPGPVVLTAAFVGFKVAGVLGALVSTIAIFAPSFAFIML
AAPFLLRARKNPWIQAFLKGVTPAVLGAIAAATLPLLRTTLAQPTLFYSIMSGVMGLLALVALIRYKTPTWLLVPLGAVL
GLIVGLLPT
>Mature_409_residues
MVQSEIKPAPGQPLSQRLAELAKVFLKLGTIGFGGPQAHIAMANDEAVVRRQWLTSEQFTEGLAVCEMLPGPASTQMGIY
IGYVRAGQLGALVSGFCFIAPAFLIVVALAWGYFRFQGLPQINDIFLGVSPVVIAIILAFCWKLARKTLKDIAGMGIAIA
IFILTLTTAINVLIQFILAGLVGLWWFRPRGTDSPIRNWWIPPMPLLLAHLPADTLTLSSFWGLERIGEFLLPLTTFFLK
VGSFIFGGGLVIIPLLEFEVVEQLHWLTQTEFINGVAIGQLSPGPVVLTAAFVGFKVAGVLGALVSTIAIFAPSFAFIML
AAPFLLRARKNPWIQAFLKGVTPAVLGAIAAATLPLLRTTLAQPTLFYSIMSGVMGLLALVALIRYKTPTWLLVPLGAVL
GLIVGLLPT

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 44045; Mature: 44045

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSEIKPAPGQPLSQRLAELAKVFLKLGTIGFGGPQAHIAMANDEAVVRRQWLTSEQFT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
EGLAVCEMLPGPASTQMGIYIGYVRAGQLGALVSGFCFIAPAFLIVVALAWGYFRFQGLP
HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QINDIFLGVSPVVIAIILAFCWKLARKTLKDIAGMGIAIAIFILTLTTAINVLIQFILAG
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVGLWWFRPRGTDSPIRNWWIPPMPLLLAHLPADTLTLSSFWGLERIGEFLLPLTTFFLK
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
VGSFIFGGGLVIIPLLEFEVVEQLHWLTQTEFINGVAIGQLSPGPVVLTAAFVGFKVAGV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
LGALVSTIAIFAPSFAFIMLAAPFLLRARKNPWIQAFLKGVTPAVLGAIAAATLPLLRTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LAQPTLFYSIMSGVMGLLALVALIRYKTPTWLLVPLGAVLGLIVGLLPT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQSEIKPAPGQPLSQRLAELAKVFLKLGTIGFGGPQAHIAMANDEAVVRRQWLTSEQFT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
EGLAVCEMLPGPASTQMGIYIGYVRAGQLGALVSGFCFIAPAFLIVVALAWGYFRFQGLP
HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QINDIFLGVSPVVIAIILAFCWKLARKTLKDIAGMGIAIAIFILTLTTAINVLIQFILAG
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVGLWWFRPRGTDSPIRNWWIPPMPLLLAHLPADTLTLSSFWGLERIGEFLLPLTTFFLK
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
VGSFIFGGGLVIIPLLEFEVVEQLHWLTQTEFINGVAIGQLSPGPVVLTAAFVGFKVAGV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
LGALVSTIAIFAPSFAFIMLAAPFLLRARKNPWIQAFLKGVTPAVLGAIAAATLPLLRTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LAQPTLFYSIMSGVMGLLALVALIRYKTPTWLLVPLGAVLGLIVGLLPT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]