| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is cheB1 [H]
Identifier: 158338183
GI number: 158338183
Start: 5127788
End: 5128204
Strand: Reverse
Name: cheB1 [H]
Synonym: AM1_5076
Alternate gene names: 158338183
Gene position: 5128204-5127788 (Counterclockwise)
Preceding gene: 158338184
Following gene: 158338178
Centisome position: 78.85
GC content: 45.8
Gene sequence:
>417_bases ATGACAGATCCGATCAAAGTAGTCCTAGTTGAAGATTCTGCAGTTGCCCTCCAGATTCTCAGTCGATTGCTGGATTCTGC CCCAGAAGTCAACGTTGTGGGCACTGCCCAGGACGGGAATGAAGGGTTAAGAGTTATTGCTCAAACCATGCCAGATGTCA TTTGCACCGATTTGCAGATGCCCAATATGGACGGTTTAGAATTCACCGAAAAGGTGATGAAGGACTTTCCCCGTCCCATA CTAGTCATCAGCAATAGTGTGCATCCTTCCGATGTAGACAATATTTTTAATTTGATGCAGGCGGGGGCCTTAGACTTTTT TCCTAAACCCAATTCTGGGTCGGCGACGGATTACGAAATCCTGAAAAAGACGCTAGTCACCAAAATTAAGGTGTTGGCGT CTAAAAAAGTGGGTTAG
Upstream 100 bases:
>100_bases ACAAACGTCGCGGTCAGGAAGCGGGGGCCAACGCTTACCTAACCAAAGGTGATTTTGATCAAACATTGCTTATCGAGACC TTAAGGAGGTTAATTGCGTC
Downstream 100 bases:
>100_bases CCCTTAGCGGGTTAGCCAGTCCAGGTGCTGGGGCAATAATTTCGCCAAATCATAGGTTTTCTGAATCGTCTGACGAGCAT TGGCTCGAAGTTCTGCCATG
Product: response regulator receiver
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTDPIKVVLVEDSAVALQILSRLLDSAPEVNVVGTAQDGNEGLRVIAQTMPDVICTDLQMPNMDGLEFTEKVMKDFPRPI LVISNSVHPSDVDNIFNLMQAGALDFFPKPNSGSATDYEILKKTLVTKIKVLASKKVG
Sequences:
>Translated_138_residues MTDPIKVVLVEDSAVALQILSRLLDSAPEVNVVGTAQDGNEGLRVIAQTMPDVICTDLQMPNMDGLEFTEKVMKDFPRPI LVISNSVHPSDVDNIFNLMQAGALDFFPKPNSGSATDYEILKKTLVTKIKVLASKKVG >Mature_137_residues TDPIKVVLVEDSAVALQILSRLLDSAPEVNVVGTAQDGNEGLRVIAQTMPDVICTDLQMPNMDGLEFTEKVMKDFPRPIL VISNSVHPSDVDNIFNLMQAGALDFFPKPNSGSATDYEILKKTLVTKIKVLASKKVG
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=129, Percent_Identity=31.7829457364341, Blast_Score=71, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 14985; Mature: 14853
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPIKVVLVEDSAVALQILSRLLDSAPEVNVVGTAQDGNEGLRVIAQTMPDVICTDLQM CCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCC PNMDGLEFTEKVMKDFPRPILVISNSVHPSDVDNIFNLMQAGALDFFPKPNSGSATDYEI CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LKKTLVTKIKVLASKKVG HHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDPIKVVLVEDSAVALQILSRLLDSAPEVNVVGTAQDGNEGLRVIAQTMPDVICTDLQM CCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCC PNMDGLEFTEKVMKDFPRPILVISNSVHPSDVDNIFNLMQAGALDFFPKPNSGSATDYEI CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LKKTLVTKIKVLASKKVG HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA