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The map label for this gene is yfcH [C]

Identifier: 158338181

GI number: 158338181

Start: 5125653

End: 5126573

Strand: Direct

Name: yfcH [C]

Synonym: AM1_5074

Alternate gene names: 158338181

Gene position: 5125653-5126573 (Clockwise)

Preceding gene: 158338180

Following gene: 158338182

Centisome position: 78.81

GC content: 48.64

Gene sequence:

>921_bases
ATGAAAGTAGTCGTAACAGGAGCAACCGGATTTGTAGGCCAACGCCTCGTTGAACGGTTGCAAGAAGAAGGCCATCAGGT
CTTAGCATTAGTTCGAAGTCCCGATAAAGCGGCTAAGCTTTTCCCTTCCCAAAAATTTCCAAATGTCGAAATCCAGGGCT
ATGAACCTCAATCTTCAGGGGATTGGCAAACAGCTCTCTCGGGTTGGGATGGGGTGGTCAATCTGGCTGGAGAACCCCTC
GTGGGCGATCGCTGGACGACCAGCCGCAAGCAAGAAATCATTAATAGTCGTGCTGTCGGTACCCAGAAGCTGGTTGAGGC
CATTGCCGCTGTGGACGAAAAGCCATCGGTGCTTGTGAATGCATCCGCCATTGGTTTTTATGGCACTAGTGAAACGGCTA
CCTTTGATGAATCAAGCAATCCCGGCGATGATTTCTTGGCAGAAGTGTGTCAATCTTGGGAGAAATCAGCGCAATCGGCC
ACTGATACTGGCACGCGATTGGTTATTTTTCGGATTGGCATTGTTTTAGGAGATGGTGGAGCCTTAGCCAAAATGTTGCC
CCCGTTTCAGATGTTTGCCGGTGGTCCCATTGGTAGTGGCAAACAGTGGTTCTCTTGGGTGCATTTAGATGACTTGGTGA
ACTTTATTCTGACAGCACTGACGGATAGTAGTAAATCTGGTGTTTATAATGCCACAGCCCCCAATCCGGTAAGGATGAAT
GGACTGTGTGAATCTCTGGGCAAAGTGCTCAATCGCCCTTCTTGGCTGCCGGTTCCAGACATTGCTCTAGAGCTGTTGTT
AGGGGAAGCGGCTCAGTTAGTTCTAGAAGGACAAAACGTACGACCAGAGAAAACTCAGGCCGATGGATTTCAATATAAAT
ATGAGACCATTGACTCGGCCCTTAAACAGATCTTGACCTAA

Upstream 100 bases:

>100_bases
GCAGAGGAGCGCTTATTGCTAAAAAGTTCAGGTTTACCTTCTGTGTGAACTCAGGGCGAGCCTTCTGTATGATCAGAGGG
AACAAGCAGCTGGCATCCCC

Downstream 100 bases:

>100_bases
TGGCACTCCAACGAATTCTGTTCCTTCACCCCAATTTCCCGGCTCAGTTCCGGCATTTGGCGATGGTGTTGGCGAAGAGT
CCCAAGCATCAAGTGGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKVVVTGATGFVGQRLVERLQEEGHQVLALVRSPDKAAKLFPSQKFPNVEIQGYEPQSSGDWQTALSGWDGVVNLAGEPL
VGDRWTTSRKQEIINSRAVGTQKLVEAIAAVDEKPSVLVNASAIGFYGTSETATFDESSNPGDDFLAEVCQSWEKSAQSA
TDTGTRLVIFRIGIVLGDGGALAKMLPPFQMFAGGPIGSGKQWFSWVHLDDLVNFILTALTDSSKSGVYNATAPNPVRMN
GLCESLGKVLNRPSWLPVPDIALELLLGEAAQLVLEGQNVRPEKTQADGFQYKYETIDSALKQILT

Sequences:

>Translated_306_residues
MKVVVTGATGFVGQRLVERLQEEGHQVLALVRSPDKAAKLFPSQKFPNVEIQGYEPQSSGDWQTALSGWDGVVNLAGEPL
VGDRWTTSRKQEIINSRAVGTQKLVEAIAAVDEKPSVLVNASAIGFYGTSETATFDESSNPGDDFLAEVCQSWEKSAQSA
TDTGTRLVIFRIGIVLGDGGALAKMLPPFQMFAGGPIGSGKQWFSWVHLDDLVNFILTALTDSSKSGVYNATAPNPVRMN
GLCESLGKVLNRPSWLPVPDIALELLLGEAAQLVLEGQNVRPEKTQADGFQYKYETIDSALKQILT
>Mature_306_residues
MKVVVTGATGFVGQRLVERLQEEGHQVLALVRSPDKAAKLFPSQKFPNVEIQGYEPQSSGDWQTALSGWDGVVNLAGEPL
VGDRWTTSRKQEIINSRAVGTQKLVEAIAAVDEKPSVLVNASAIGFYGTSETATFDESSNPGDDFLAEVCQSWEKSAQSA
TDTGTRLVIFRIGIVLGDGGALAKMLPPFQMFAGGPIGSGKQWFSWVHLDDLVNFILTALTDSSKSGVYNATAPNPVRMN
GLCESLGKVLNRPSWLPVPDIALELLLGEAAQLVLEGQNVRPEKTQADGFQYKYETIDSALKQILT

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=310, Percent_Identity=36.4516129032258, Blast_Score=187, Evalue=1e-47,
Organism=Escherichia coli, GI1788642, Length=307, Percent_Identity=41.6938110749186, Blast_Score=243, Evalue=1e-65,
Organism=Drosophila melanogaster, GI28573846, Length=306, Percent_Identity=30.0653594771242, Blast_Score=148, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33012; Mature: 33012

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVVTGATGFVGQRLVERLQEEGHQVLALVRSPDKAAKLFPSQKFPNVEIQGYEPQSSG
CEEEEECCCHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCC
DWQTALSGWDGVVNLAGEPLVGDRWTTSRKQEIINSRAVGTQKLVEAIAAVDEKPSVLVN
CHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
ASAIGFYGTSETATFDESSNPGDDFLAEVCQSWEKSAQSATDTGTRLVIFRIGIVLGDGG
ECEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCC
ALAKMLPPFQMFAGGPIGSGKQWFSWVHLDDLVNFILTALTDSSKSGVYNATAPNPVRMN
HHHHHCCCHHHHCCCCCCCCHHHHHEECHHHHHHHHHHHHCCCCCCCEEECCCCCCEEHH
GLCESLGKVLNRPSWLPVPDIALELLLGEAAQLVLEGQNVRPEKTQADGFQYKYETIDSA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
LKQILT
HHHHCC
>Mature Secondary Structure
MKVVVTGATGFVGQRLVERLQEEGHQVLALVRSPDKAAKLFPSQKFPNVEIQGYEPQSSG
CEEEEECCCHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCC
DWQTALSGWDGVVNLAGEPLVGDRWTTSRKQEIINSRAVGTQKLVEAIAAVDEKPSVLVN
CHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
ASAIGFYGTSETATFDESSNPGDDFLAEVCQSWEKSAQSATDTGTRLVIFRIGIVLGDGG
ECEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCC
ALAKMLPPFQMFAGGPIGSGKQWFSWVHLDDLVNFILTALTDSSKSGVYNATAPNPVRMN
HHHHHCCCHHHHCCCCCCCCHHHHHEECHHHHHHHHHHHHCCCCCCCEEECCCCCCEEHH
GLCESLGKVLNRPSWLPVPDIALELLLGEAAQLVLEGQNVRPEKTQADGFQYKYETIDSA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
LKQILT
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]